CF01-CM01-Zygote_R1_001.fastp-trim.20220827_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.24.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 3200047 lines in total Total number of methylation call strings processed: 6400094 Final Cytosine Methylation Report ================================= Total number of C's analysed: 46977012 Total methylated C's in CpG context: 1047384 Total methylated C's in CHG context: 226360 Total methylated C's in CHH context: 1317165 Total C to T conversions in CpG context: 4798450 Total C to T conversions in CHG context: 8403375 Total C to T conversions in CHH context: 31184278 C methylated in CpG context: 17.9% C methylated in CHG context: 2.6% C methylated in CHH context: 4.1%