Index of /seashell/bu-github/ceabigr/output/65-exon-coverage

[ICO]NameLast modifiedSizeDescription
[PARENTDIR]Parent Directory   -  
[TXT]test_exon_coverage.txt 2024-06-06 09:14 0  
[TXT]processed_data.csv 2024-06-06 09:14 28M 
[TXT]geneids-exon_thresho..>2024-06-06 09:14 508K 
[DIR]figures/ 2024-06-06 09:14 -  
[TXT]extracted_data.txt 2023-12-12 08:57 13M 
[TXT]S77_exon_exp_counts.txt2023-12-10 19:23 532M 
[TXT]S77F_exonsum_10_logf..>2024-06-06 09:14 2.6M 
[TXT]S77F_exonsum_10_fold..>2024-06-06 09:14 3.7M 
[TXT]S77F_exon_reads.proc..>2024-06-06 09:14 28M 
[TXT]S77F_exon_reads.extr..>2023-12-12 09:48 13M 
[TXT]S77F_exon_reads.bam_..>2023-12-10 21:08 318M 
[ ]S77F_exon_reads.bam.bai2023-12-10 20:26 902K 
[ ]S77F_exon_reads.bam 2023-12-10 20:04 1.4G 
[TXT]S76F_exonsum_10_logf..>2024-06-06 09:14 2.6M 
[TXT]S76F_exonsum_10_fold..>2024-06-06 09:14 3.8M 
[TXT]S76F_exon_reads.proc..>2024-06-06 09:14 28M 
[TXT]S76F_exon_reads.extr..>2023-12-12 09:47 13M 
[TXT]S76F_exon_reads.bam_..>2023-12-10 21:07 318M 
[ ]S76F_exon_reads.bam.bai2023-12-10 20:26 844K 
[ ]S76F_exon_reads.bam 2023-12-10 20:11 1.3G 
[TXT]S64M_exonsum_10_logf..>2024-06-06 09:14 2.6M 
[TXT]S64M_exonsum_10_fold..>2024-06-06 09:14 4.0M 
[TXT]S64M_exon_reads.proc..>2024-06-06 09:14 28M 
[TXT]S64M_exon_reads.extr..>2023-12-12 09:44 13M 
[TXT]S64M_exon_reads.bam_..>2023-12-10 21:01 318M 
[ ]S64M_exon_reads.bam.bai2023-12-10 20:26 631K 
[ ]S64M_exon_reads.bam 2023-12-10 20:10 638M 
[TXT]S59M_exonsum_10_logf..>2024-06-06 09:14 2.6M 
[TXT]S59M_exonsum_10_fold..>2024-06-06 09:14 4.0M 
[TXT]S59M_exon_reads.proc..>2024-06-06 09:14 28M 
[TXT]S59M_exon_reads.extr..>2023-12-12 09:43 13M 
[TXT]S59M_exon_reads.bam_..>2023-12-10 21:06 318M 
[ ]S59M_exon_reads.bam.bai2023-12-10 20:26 668K 
[ ]S59M_exon_reads.bam 2023-12-10 20:07 774M 
[TXT]S54F_exonsum_10_logf..>2024-06-06 09:14 2.6M 
[TXT]S54F_exonsum_10_fold..>2024-06-06 09:14 3.9M 
[TXT]S54F_exon_reads.proc..>2024-06-06 09:14 28M 
[TXT]S54F_exon_reads.extr..>2023-12-12 09:41 13M 
[TXT]S54F_exon_reads.bam_..>2023-12-10 21:09 318M 
[ ]S54F_exon_reads.bam.bai2023-12-10 20:26 810K 
[ ]S54F_exon_reads.bam 2023-12-10 20:13 1.1G 
[TXT]S53F_exonsum_10_logf..>2024-06-06 09:14 2.6M 
[TXT]S53F_exonsum_10_fold..>2024-06-06 09:14 3.7M 
[TXT]S53F_exon_reads.proc..>2024-06-06 09:14 28M 
[TXT]S53F_exon_reads.extr..>2023-12-12 09:40 13M 
[TXT]S53F_exon_reads.bam_..>2023-12-10 21:04 318M 
[ ]S53F_exon_reads.bam.bai2023-12-10 20:26 830K 
[ ]S53F_exon_reads.bam 2023-12-10 20:09 1.2G 
[TXT]S52F_exonsum_10_logf..>2024-06-06 09:14 2.6M 
[TXT]S52F_exonsum_10_fold..>2024-06-06 09:14 4.0M 
[TXT]S52F_exon_reads.proc..>2024-06-06 09:14 28M 
[TXT]S52F_exon_reads.extr..>2023-12-12 09:39 13M 
[TXT]S52F_exon_reads.bam_..>2023-12-10 21:13 318M 
[ ]S52F_exon_reads.bam.bai2023-12-10 20:26 844K 
[ ]S52F_exon_reads.bam 2023-12-10 20:11 1.1G 
[TXT]S50F_exonsum_10_logf..>2024-06-06 09:14 2.6M 
[TXT]S50F_exonsum_10_fold..>2024-06-06 09:14 3.6M 
[TXT]S50F_exon_reads.proc..>2024-06-06 09:14 28M 
[TXT]S50F_exon_reads.extr..>2023-12-12 09:37 13M 
[TXT]S50F_exon_reads.bam_..>2023-12-10 21:02 318M 
[ ]S50F_exon_reads.bam.bai2023-12-10 20:26 776K 
[ ]S50F_exon_reads.bam 2023-12-10 20:07 1.1G 
[TXT]S48M_exonsum_10_logf..>2024-06-06 09:14 2.7M 
[TXT]S48M_exonsum_10_fold..>2024-06-06 09:14 4.2M 
[TXT]S48M_exon_reads.proc..>2024-06-06 09:14 28M 
[TXT]S48M_exon_reads.extr..>2023-12-12 09:36 13M 
[TXT]S48M_exon_reads.bam_..>2023-12-10 21:15 318M 
[ ]S48M_exon_reads.bam.bai2023-12-10 20:26 1.0M 
[ ]S48M_exon_reads.bam 2023-12-10 20:03 1.1G 
[TXT]S44F_exonsum_10_logf..>2024-06-06 09:14 2.6M 
[TXT]S44F_exonsum_10_fold..>2024-06-06 09:14 3.8M 
[TXT]S44F_exon_reads.proc..>2024-06-06 09:14 28M 
[TXT]S44F_exon_reads.extr..>2023-12-12 09:35 13M 
[TXT]S44F_exon_reads.bam_..>2023-12-10 21:06 318M 
[ ]S44F_exon_reads.bam.bai2023-12-10 20:26 842K 
[ ]S44F_exon_reads.bam 2023-12-10 20:01 1.3G 
[TXT]S41F_exonsum_10_logf..>2024-06-06 09:14 2.6M 
[TXT]S41F_exonsum_10_fold..>2024-06-06 09:14 3.9M 
[TXT]S41F_exon_reads.proc..>2024-06-06 09:14 28M 
[TXT]S41F_exon_reads.extr..>2023-12-12 09:33 13M 
[TXT]S41F_exon_reads.bam_..>2023-12-10 21:12 318M 
[ ]S41F_exon_reads.bam.bai2023-12-10 20:26 815K 
[ ]S41F_exon_reads.bam 2023-12-10 20:00 1.1G 
[TXT]S39F_exonsum_10_logf..>2024-06-06 09:14 2.6M 
[TXT]S39F_exonsum_10_fold..>2024-06-06 09:14 3.6M 
[TXT]S39F_exon_reads.proc..>2024-06-06 09:14 28M 
[TXT]S39F_exon_reads.extr..>2023-12-12 09:31 13M 
[TXT]S39F_exon_reads.bam_..>2023-12-10 21:07 318M 
[ ]S39F_exon_reads.bam.bai2023-12-10 20:26 875K 
[ ]S39F_exon_reads.bam 2023-12-10 20:01 1.3G 
[TXT]S36F_exonsum_10_logf..>2024-06-06 09:14 2.6M 
[TXT]S36F_exonsum_10_fold..>2024-06-06 09:14 3.7M 
[TXT]S36F_exon_reads.proc..>2024-06-06 09:14 28M 
[TXT]S36F_exon_reads.extr..>2023-12-12 09:30 13M 
[TXT]S36F_exon_reads.bam_..>2023-12-10 21:03 318M 
[ ]S36F_exon_reads.bam.bai2023-12-10 20:26 817K 
[ ]S36F_exon_reads.bam 2023-12-10 20:00 1.1G 
[TXT]S35F_exonsum_10_logf..>2024-06-06 09:14 2.6M 
[TXT]S35F_exonsum_10_fold..>2024-06-06 09:14 3.6M 
[TXT]S35F_exon_reads.proc..>2024-06-06 09:14 28M 
[TXT]S35F_exon_reads.extr..>2023-12-12 09:28 13M 
[TXT]S35F_exon_reads.bam_..>2023-12-10 21:11 318M 
[ ]S35F_exon_reads.bam.bai2023-12-10 20:26 791K 
[ ]S35F_exon_reads.bam 2023-12-10 20:00 1.1G 
[TXT]S31M_exonsum_10_logf..>2024-06-06 09:14 2.6M 
[TXT]S31M_exonsum_10_fold..>2024-06-06 09:14 4.0M 
[TXT]S31M_exon_reads.proc..>2024-06-06 09:14 28M 
[TXT]S31M_exon_reads.extr..>2023-12-12 09:27 13M 
[TXT]S31M_exon_reads.bam_..>2023-12-10 20:57 318M 
[ ]S31M_exon_reads.bam.bai2023-12-10 20:26 574K 
[ ]S31M_exon_reads.bam 2023-12-10 19:58 443M 
[TXT]S29F_exonsum_10_logf..>2024-06-06 09:14 2.6M 
[TXT]S29F_exonsum_10_fold..>2024-06-06 09:14 3.9M 
[TXT]S29F_exon_reads.proc..>2024-06-06 09:14 28M 
[TXT]S29F_exon_reads.extr..>2023-12-12 09:26 13M 
[TXT]S29F_exon_reads.bam_..>2023-12-10 21:11 318M 
[ ]S29F_exon_reads.bam.bai2023-12-10 20:26 811K 
[ ]S29F_exon_reads.bam 2023-12-10 20:06 1.1G 
[TXT]S23M_exonsum_10_logf..>2024-06-06 09:14 2.6M 
[TXT]S23M_exonsum_10_fold..>2024-06-06 09:14 4.1M 
[TXT]S23M_exon_reads.proc..>2024-06-06 09:14 28M 
[TXT]S23M_exon_reads.extr..>2023-12-12 09:24 13M 
[TXT]S23M_exon_reads.bam_..>2023-12-10 21:10 318M 
[ ]S23M_exon_reads.bam.bai2023-12-10 20:26 796K 
[ ]S23M_exon_reads.bam 2023-12-10 20:17 822M 
[TXT]S22F_exonsum_10_logf..>2024-06-06 09:14 2.6M 
[TXT]S22F_exonsum_10_fold..>2024-06-06 09:14 3.8M 
[TXT]S22F_exon_reads.proc..>2024-06-06 09:14 28M 
[TXT]S22F_exon_reads.extr..>2023-12-12 09:23 13M 
[TXT]S22F_exon_reads.bam_..>2023-12-10 21:15 318M 
[ ]S22F_exon_reads.bam.bai2023-12-10 20:26 943K 
[ ]S22F_exon_reads.bam 2023-12-10 20:14 1.5G 
[TXT]S19F_exonsum_10_logf..>2024-06-06 09:14 2.5M 
[TXT]S19F_exonsum_10_fold..>2024-06-06 09:14 3.6M 
[TXT]S19F_exon_reads.proc..>2024-06-06 09:14 28M 
[TXT]S19F_exon_reads.extr..>2023-12-12 09:22 13M 
[TXT]S19F_exon_reads.bam_..>2023-12-10 21:05 318M 
[ ]S19F_exon_reads.bam.bai2023-12-10 20:26 855K 
[ ]S19F_exon_reads.bam 2023-12-10 20:13 1.2G 
[TXT]S16F_exonsum_10_logf..>2024-06-06 09:14 2.6M 
[TXT]S16F_exonsum_10_fold..>2024-06-06 09:14 3.7M 
[TXT]S16F_exon_reads.proc..>2024-06-06 09:14 28M 
[TXT]S16F_exon_reads.extr..>2023-12-12 09:21 13M 
[TXT]S16F_exon_reads.bam_..>2023-12-10 21:06 318M 
[ ]S16F_exon_reads.bam.bai2023-12-10 20:25 861K 
[ ]S16F_exon_reads.bam 2023-12-10 20:15 1.3G 
[TXT]S13M_exonsum_10_logf..>2024-06-06 09:14 2.6M 
[TXT]S13M_exonsum_10_fold..>2024-06-06 09:14 4.0M 
[TXT]S13M_exon_reads.proc..>2024-06-06 09:14 28M 
[TXT]S13M_exon_reads.extr..>2023-12-12 09:19 13M 
[TXT]S13M_exon_reads.bam_..>2023-12-10 21:07 318M 
[ ]S13M_exon_reads.bam.bai2023-12-10 20:25 615K 
[ ]S13M_exon_reads.bam 2023-12-10 20:14 548M 
[TXT]S12M_exonsum_10_logf..>2024-06-06 09:14 2.6M 
[TXT]S12M_exonsum_10_fold..>2024-06-06 09:14 4.1M 
[TXT]S12M_exon_reads.proc..>2024-06-06 09:14 28M 
[TXT]S12M_exon_reads.extr..>2023-12-12 09:18 13M 
[TXT]S12M_exon_reads.bam_..>2023-12-10 21:08 318M 
[ ]S12M_exon_reads.bam.bai2023-12-10 20:25 740K 
[ ]S12M_exon_reads.bam 2023-12-10 20:16 725M 
[TXT]S9gtf_exon_coverage.txt2023-12-10 12:40 606M 
[TXT]S9gff_exon_coverage.txt2023-12-09 13:09 442M 
[TXT]S9_exon_exp_counts.txt 2023-12-10 13:01 0  
[ ]S9_exon.bam.bai 2023-12-10 20:27 104  
[ ]S9_exon.bam 2023-12-10 12:53 569  
[TXT]S9M_exonsum_10_logfo..>2024-06-06 09:14 2.6M 
[TXT]S9M_exonsum_10_fold.csv2024-06-06 09:14 4.1M 
[TXT]S9M_exon_reads.proce..>2024-06-06 09:14 28M 
[TXT]S9M_exon_reads.extra..>2023-12-12 09:51 13M 
[TXT]S9M_exon_reads.bam_m..>2023-12-10 21:07 318M 
[ ]S9M_exon_reads.bam.bai 2023-12-10 20:27 751K 
[ ]S9M_exon_reads.bam 2023-12-10 20:08 762M 
[TXT]S7M_exonsum_10_logfo..>2024-06-06 09:14 2.6M 
[TXT]S7M_exonsum_10_fold.csv2024-06-06 09:14 4.1M 
[TXT]S7M_exon_reads.proce..>2024-06-06 09:14 28M 
[TXT]S7M_exon_reads.extra..>2023-12-12 09:49 13M 
[TXT]S7M_exon_reads.bam_m..>2023-12-10 21:06 318M 
[ ]S7M_exon_reads.bam.bai 2023-12-10 20:27 689K 
[ ]S7M_exon_reads.bam 2023-12-10 20:14 642M 
[TXT]S6M_exonsum_10_logfo..>2024-06-06 09:14 2.6M 
[TXT]S6M_exonsum_10_fold.csv2024-06-06 09:14 4.1M 
[TXT]S6M_exon_reads.proce..>2024-06-06 09:14 28M 
[TXT]S6M_exon_reads.extra..>2023-12-12 09:45 13M 
[TXT]S6M_exon_reads.bam_m..>2023-12-10 21:15 318M 
[ ]S6M_exon_reads.bam.bai 2023-12-10 20:26 773K 
[ ]S6M_exon_reads.bam 2023-12-10 20:15 819M 
[TXT]S3F_exonsum_10_logfo..>2024-06-06 09:14 2.6M 
[TXT]S3F_exonsum_10_fold.csv2024-06-06 09:14 3.7M 
[TXT]S3F_exon_reads.proce..>2024-06-06 09:14 28M 
[TXT]S3F_exon_reads.extra..>2023-12-12 09:32 13M 
[TXT]S3F_exon_reads.bam_m..>2023-12-10 21:03 318M 
[ ]S3F_exon_reads.bam.bai 2023-12-10 20:26 806K 
[ ]S3F_exon_reads.bam 2023-12-10 20:12 1.1G 
[TXT]GCF_902806645.1_exon..>2023-12-10 12:49 357M 
[TXT]6M_R1_val_1_bismark_..>2024-06-06 09:14 28M 
[TXT]6M_R1_val_1_bismark_..>2023-12-12 09:17 13M 
[TXT]6M_R1_val_1_bismark_..>2023-12-10 20:45 317M 
[ ]6M_R1_val_1_bismark_..>2023-12-10 20:25 540K 
[ ]6M_R1_val_1_bismark_..>2023-12-10 20:23 1.9G 
[TXT]3F_R1_val_1_bismark_..>2024-06-06 09:14 28M 
[TXT]3F_R1_val_1_bismark_..>2023-12-12 09:15 13M 
[TXT]3F_R1_val_1_bismark_..>2023-12-10 21:02 318M 
[ ]3F_R1_val_1_bismark_..>2023-12-10 20:25 1.0M 
[ ]3F_R1_val_1_bismark_..>2023-12-10 20:27 2.9G