FastQCFastQC Report
Mon 17 Oct 2022
23B_S65_L002_R1_001.fastq

Summary

[OK]Basic Statistics

MeasureValue
Filename23B_S65_L002_R1_001.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7835395
Sequences flagged as poor quality0
Sequence length101
%GC35

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TCTGCCTGACTAATTCATGTCAATAAATCACATCAAATGCAAAAAAAAAA171220.2185212104814116No Hit
GATGCAAGAGGAAAAGAGAGAGAAAAGCGATGTTGTTGTTTCAAACCTGA128130.16352717380553244No Hit
CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTAGATCGGAAGAGCACAC100650.12845555329373948No Hit
GATGCAAGGGGAAAAGAGAGAGAAAAGCGATGTTGTTGTTTCAAACCTGA84420.10774185602640325No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)