FastQCFastQC Report
Sun 7 Aug 2022
13C_S97_L001_R1_001.fastq

Summary

[OK]Basic Statistics

MeasureValue
Filename13C_S97_L001_R1_001.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6039116
Sequences flagged as poor quality0
Sequence length101
%GC33

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA222410.3682823777519756No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTAGATCGGAAGAGCACACG127000.21029567903646826No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTATATCGGAAGAGCACACG65250.10804561462306735No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)