FastQCFastQC Report
Sun 7 Aug 2022
07C_S91_L001_R1_001.fastq

Summary

[OK]Basic Statistics

MeasureValue
Filename07C_S91_L001_R1_001.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3305672
Sequences flagged as poor quality0
Sequence length101
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTAGATCGGAAGAGCACACG77950.23580681930935676No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAATTAGATCGGAAGAGCACACGT39560.1196730952133182No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTATATCGGAAGAGCACACG35220.10654414594067409No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)