FastQCFastQC Report
Mon 8 Aug 2022
13C_S97_R1.fastq

Summary

[OK]Basic Statistics

MeasureValue
Filename13C_S97_R1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8503863
Sequences flagged as poor quality0
Sequence length20-86
%GC39

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAATAAGTAGAAAATACAAATCATTACATGTACAATTATGTCTATGAAAA339480.3992068075414667No Hit
AAGAAATAAGTAGAAAATACAAATCATTACATGTACAATTATGTCTATGA200920.23626909323445122No Hit
TATAAGAAATAAGTAGAAAATACAAATCATTACATGTACAATTATGTCTA100140.11775824704607776No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)