FastQCFastQC Report
Tue 9 Aug 2022
T026G_S191_R1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameT026G_S191_R1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5069141
Sequences flagged as poor quality0
Sequence length20-86
%GC35

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGGGGAAGATTGCGACCTCGATGTTGGCTTTAGATATCCTAGAGGCGTAG102960.20311133582593185No Hit
AGGTAATGATTAAGAGGGACTGACGGGGGCATTCGTATTACGGTGTTAGA93430.1843113063929372No Hit
TGGAGGGGAAGATTGCGACCTCGATGTTGGCTTTAGATATCCTAGAGGCG73360.1447187994967984No Hit
TGGCTCTTATACGATTTTGATGGGAGATCAGTGAAAATAAGTCTTTCACT69430.13696600666661274No Hit
TATTGGAGGGGAAGATTGCGACCTCGATGTTGGCTTTAGATATCCTAGAG65560.12933157708574292No Hit
AGCGCAATTTCTCCCGAAAGATGGTATTGGAGGGGAAGATTGCGACCTCG63650.12556368031585627No Hit
TTGCGACCTCGATGTTGGCTTTAGATATCCTAGAGGCGTAGAAGCTTCTA60860.12005978922267106No Hit
AGCTCGAGGTAATGATTAAGAGGGACTGACGGGGGCATTCGTATTACGGT60680.11970469947472362No Hit
TCGAGGTAATGATTAAGAGGGACTGACGGGGGCATTCGTATTACGGTGTT60170.11869861185553925No Hit
AGATTGCGACCTCGATGTTGGCTTTAGATATCCTAGAGGCGTAGAAGCTT58460.11532525925003863No Hit
AACAGCGCAATTTCTCCCGAAAGATGGTATTGGAGGGGAAGATTGCGACC58040.11449671650482793No Hit
AAGGGCTGATGGCTACATCCTAGAAGGAAAAGAACTTGAATTCTACATGA56750.11195190664453801No Hit
TTTTGGCTCTTATACGATTTTGATGGGAGATCAGTGAAAATAAGTCTTTC55800.11007782186370434No Hit
GATAACAGCGCAATTTCTCCCGAAAGATGGTATTGGAGGGGAAGATTGCG55570.1096240960746604No Hit
ATCAGTGAAAATAAGTCTTTCACTATTATATAAATCTAACTCGTATTTCC54160.10684255971573882No Hit
GTGAAAATAAGTCTTTCACTATTATATAAATCTAACTCGTATTTCCTAAC51420.10143730466365011No Hit
GGAAGATTGCGACCTCGATGTTGGCTTTAGATATCCTAGAGGCGTAGAAG50720.10005640008829898No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)