FastQCFastQC Report
Tue 9 Aug 2022
T021G_S188_R1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameT021G_S188_R1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4555709
Sequences flagged as poor quality0
Sequence length20-86
%GC34

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGGGGAAGATTGCGACCTCGATGTTGGCTTTAGATATCCTAGAGGCGTAG70060.15378506397138184No Hit
AGCGCAATTTCTCCCGAAAGATGGTATTGGAGGGGAAGATTGCGACCTCG65400.1435561402187892No Hit
AAGGGCTGATGGCTACATCCTAGAAGGAAAAGAACTTGAATTCTACATGA64380.14131719124289985No Hit
TGATCTGGAGGGGGATAAATAAGGAAAGTAGGTTAAATAGATTTAATGAA61960.13600517504520154No Hit
AACAGCGCAATTTCTCCCGAAAGATGGTATTGGAGGGGAAGATTGCGACC58060.12744448778444806No Hit
AGGTAATGATTAAGAGGGACTGACGGGGGCATTCGTATTACGGTGTTAGA57100.12533724168949334No Hit
TGGAGGGGAAGATTGCGACCTCGATGTTGGCTTTAGATATCCTAGAGGCG53780.11804968227777499No Hit
TATTGGAGGGGAAGATTGCGACCTCGATGTTGGCTTTAGATATCCTAGAG52660.11559122850032784No Hit
GATAACAGCGCAATTTCTCCCGAAAGATGGTATTGGAGGGGAAGATTGCG49030.10762320420378034No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)