FastQCFastQC Report
Tue 9 Aug 2022
T021F_S176_R1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameT021F_S176_R1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4444022
Sequences flagged as poor quality0
Sequence length20-86
%GC35

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGGTAATGATTAAGAGGGACTGACGGGGGCATTCGTATTACGGTGTTAGA90630.20393688420084327No Hit
AGGGGAAGATTGCGACCTCGATGTTGGCTTTAGATATCCTAGAGGCGTAG78840.17740686252228274No Hit
TGATCTGGAGGGGGATAAATAAGGAAAGTAGGTTAAATAGATTTAATGAA75850.17067872301262235No Hit
AGCTCGAGGTAATGATTAAGAGGGACTGACGGGGGCATTCGTATTACGGT58180.13091744370302397No Hit
TGGAGGGGAAGATTGCGACCTCGATGTTGGCTTTAGATATCCTAGAGGCG57250.1288247447919925No Hit
TCGAGGTAATGATTAAGAGGGACTGACGGGGGCATTCGTATTACGGTGTT53730.12090399192443242No Hit
TATTGGAGGGGAAGATTGCGACCTCGATGTTGGCTTTAGATATCCTAGAG50530.1137033074993778No Hit
TGGCTCTTATACGATTTTGATGGGAGATCAGTGAAAATAAGTCTTTCACT49660.11174562142131611No Hit
AAGGGCTGATGGCTACATCCTAGAAGGAAAAGAACTTGAATTCTACATGA46230.10402738780321069No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)