FastQCFastQC Report
Tue 9 Aug 2022
T011F_S110_R1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameT011F_S110_R1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3705417
Sequences flagged as poor quality0
Sequence length20-86
%GC37

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGGTAATGATTAAGAGGGACTGACGGGGGCATTCGTATTACGGTGTTAGA100470.27114357169516956No Hit
AGGGGAAGATTGCGACCTCGATGTTGGCTTTAGATATCCTAGAGGCGTAG94210.2542493867761712No Hit
TGGAGGGGAAGATTGCGACCTCGATGTTGGCTTTAGATATCCTAGAGGCG74110.20000447992763026No Hit
TATTGGAGGGGAAGATTGCGACCTCGATGTTGGCTTTAGATATCCTAGAG72700.1961992401934789No Hit
AGCTCGAGGTAATGATTAAGAGGGACTGACGGGGGCATTCGTATTACGGT65960.17800965451391842No Hit
TCGAGGTAATGATTAAGAGGGACTGACGGGGGCATTCGTATTACGGTGTT61040.16473179671815616No Hit
CGGGGGCATTCGTATTACGGTGTTAGAGGTGAAATTCTTGGATCGCCGTA55240.14907903752802992No Hit
ACGTAGGGGTAGAATATACAGAGGCTAGAAAGTGAAGATATTCTAAGTCT51420.13876980647522263No Hit
AGCGCAATTTCTCCCGAAAGATGGTATTGGAGGGGAAGATTGCGACCTCG47500.1281907002639649No Hit
TGACGGGGGCATTCGTATTACGGTGTTAGAGGTGAAATTCTTGGATCGCC42220.11394129189778102No Hit
AAGATGACCCTGTTGACACAAAAGATGAGCCAAAGAAGAATAACGGAAAG41240.11129651534496658No Hit
AACAGCGCAATTTCTCCCGAAAGATGGTATTGGAGGGGAAGATTGCGACC41210.11121555279743144No Hit
AGATTGCGACCTCGATGTTGGCTTTAGATATCCTAGAGGCGTAGAAGCTT37990.10252557269532687No Hit
TTGCGACCTCGATGTTGGCTTTAGATATCCTAGAGGCGTAGAAGCTTCTA37480.10114920938722957No Hit
TTGGTGGAAAATGTGTTAAGAGACGACCATGGGCATTGATAAAAACCAAA37470.10112222187138452No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)