FastQCFastQC Report
Tue 9 Aug 2022
T010G_S121_R1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameT010G_S121_R1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4514651
Sequences flagged as poor quality0
Sequence length20-86
%GC35

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAGTCCTCCAAGCTTGGCACAGGGCGTCCAGTGCTATTGGGTTGTAGGGG97310.2155426853592891No Hit
AGGGGAAGATTGCGACCTCGATGTTGGCTTTAGATATCCTAGAGGCGTAG85890.1902472638527319No Hit
AGGTAATGATTAAGAGGGACTGACGGGGGCATTCGTATTACGGTGTTAGA77940.17263792926629323No Hit
AGCGCAATTTCTCCCGAAAGATGGTATTGGAGGGGAAGATTGCGACCTCG73840.16355638564309843No Hit
TGGAGGGGAAGATTGCGACCTCGATGTTGGCTTTAGATATCCTAGAGGCG67170.14878226467560837No Hit
AGACCTAAGTCCTCCAAGCTTGGCACAGGGCGTCCAGTGCTATTGGGTTG66720.14778550988769676No Hit
AACAGCGCAATTTCTCCCGAAAGATGGTATTGGAGGGGAAGATTGCGACC64730.14337763871448758No Hit
TATTGGAGGGGAAGATTGCGACCTCGATGTTGGCTTTAGATATCCTAGAG64130.14204863233060538No Hit
CCTAAGTCCTCCAAGCTTGGCACAGGGCGTCCAGTGCTATTGGGTTGTAG58150.12880286870457983No Hit
AAGGGCTGATGGCTACATCCTAGAAGGAAAAGAACTTGAATTCTACATGA57720.12785041412946427No Hit
GATAACAGCGCAATTTCTCCCGAAAGATGGTATTGGAGGGGAAGATTGCG55930.12388554508421581No Hit
GCGCAATTTCTCCCGAAAGATGGTATTGGAGGGGAAGATTGCGACCTCGA53010.11741771401598929No Hit
AGATTGCGACCTCGATGTTGGCTTTAGATATCCTAGAGGCGTAGAAGCTT51970.11511410295059353No Hit
TTGCGACCTCGATGTTGGCTTTAGATATCCTAGAGGCGTAGAAGCTTCTA50880.11269974135320758No Hit
AGCTCGAGGTAATGATTAAGAGGGACTGACGGGGGCATTCGTATTACGGT49210.10900067358473556No Hit
CGGGGGCATTCGTATTACGGTGTTAGAGGTGAAATTCTTGGATCGCCGTA47760.10578890815702033No Hit
GGAAGATTGCGACCTCGATGTTGGCTTTAGATATCCTAGAGGCGTAGAAG45430.10062793336627791No Hit
TCGAGGTAATGATTAAGAGGGACTGACGGGGGCATTCGTATTACGGTGTT45350.10045073251509364No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)