echo $PATH
Download genome
mkdir sequences/
cd sequences/
# mytilus edulis genome: https://www.ncbi.nlm.nih.gov/assembly/GCA_019925275.1
wget -r \
--no-directories --no-parent \
-P . \
-A GCA_019925275.1_mytilus_edulis.fna https://gannet.fish.washington.edu/panopea/PSMFC-mytilus-byssus-pilot/genome/ \
--no-check-certificate
# mytilus gallo genome: https://www.ncbi.nlm.nih.gov/assembly/GCA_900618805.1
wget -r \
--no-directories --no-parent \
-P . \
-A GCA_900618805.1_mytilus_galloprovincialis.fna https://gannet.fish.washington.edu/panopea/PSMFC-mytilus-byssus-pilot/genome/ \
--no-check-certificate
# mytilus trossulus transcriptome - https://www.ncbi.nlm.nih.gov/sra/SRX3198554[accn]
wget -r \
--no-directories --no-parent \
-P . \
-A SRR6051615-mytilus_trossulus_transcriptome.fasta https://gannet.fish.washington.edu/panopea/PSMFC-mytilus-byssus-pilot/genome/ \
--no-check-certificate