Sample aligned_reads dedup_reads dedup_reads_percent dup_reads dup_reads_percent CH01_06_S1_R1 9198318.0 5968972.0 64.89 3229346.0 35.11 CH01_14_S2_R1 8234715.0 4880587.0 59.27 3354128.0 40.73 CH01_22_S3_R1 10728766.0 6655768.0 62.04 4072998.0 37.96 CH01_38_S4_R1 7527411.0 5114464.0 67.94 2412947.0 32.06 CH03_04_S5_R1 5719739.0 4211298.0 73.63 1508441.0 26.37 CH03_15_S6_R1 7239179.0 4426741.0 61.15 2812438.0 38.85 CH03_33_S7_R1 9128105.0 5846675.0 64.05 3281430.0 35.95 CH05_01_S8_R1 7799042.0 5620226.0 72.06 2178816.0 27.94 CH05_06_S9_R1 5354295.0 2832576.0 52.9 2521719.0 47.1 CH05_21_S10_R1 9173874.0 5876228.0 64.05 3297646.0 35.95 CH05_24_S11_R1 12427683.0 8121580.0 65.35 4306103.0 34.65 CH07_06_S12_R1 9628223.0 6288529.0 65.31 3339694.0 34.69 CH07_11_S13_R1 6858200.0 3937856.0 57.42 2920344.0 42.58 CH07_24_S14_R1 8373460.0 4350451.0 51.96 4023009.0 48.04 CH09_02_S15_R1 7573615.0 5169554.0 68.26 2404061.0 31.74 CH09_13_S16_R1 10851238.0 2637721.0 24.31 8213517.0 75.69 CH09_28_S17_R1 8463159.0 5574134.0 65.86 2889025.0 34.14 CH10_01_S18_R1 7416281.0 5255031.0 70.86 2161250.0 29.14 CH10_08_S19_R1 6052884.0 4439522.0 73.35 1613362.0 26.65 CH10_11_S20_R1 8558834.0 5848975.0 68.34 2709859.0 31.66