FastQCFastQC Report
Fri 27 May 2022
SRR15089763_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15089763_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16487768
Sequences flagged as poor quality0
Sequence length101
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCCGTTACCCGTCATTGCCATGGTAGGCCAATACCCTACCGTCGGAAGC988880.5997658385295087No Hit
CTGACAGTTAAATACGAATGCCCCCAACTATCCCTATCAATCATTACCTC635410.3853826667138936No Hit
CTACTTCAAAAATAAAAGATTCAAATTCCTTTCAACTCTCTTTCAACTTT509980.30930808827489564No Hit
CCGTTACCCGTCATTGCCATGGTAGGCCAATACCCTACCGTCGGAAGCTG328230.1990748535520393No Hit
CTGAGGTCTGGAAGGCGATTCCTTTTTTCCTTTGAGATGCCGCCACCGCT322490.19559348481856367No Hit
CTTAGGAGAAAACCAATAATTTACTACTTTAGCTGGCATGCAATAAGAAT287510.17437775689226098No Hit
CCCCACCTGACTATGTCTTCCGCGCAAATCAGATGCCAAAGGAGGCAACC260250.1578442879594133No Hit
CGAATGCCCCCAACTATCCCTATCAATCATTACCTCAGCTCTAGAAACCA240060.14559884636901732No Hit
CCCCGCGCGACACCGGATGTCGCTTGGCGGATCTTTCTCCCTGAATTTCA220630.1338143525551791No Hit
CCAGTCTACAATAAGCCATGATTTATCACTTGAATTAATGGGGTATCTAA194890.1182027791754469No Hit
ACCATGTTTCGACTTAACACAAATTAGAATGCGAATTTTACAATTTTACA193910.11760839914778033No Hit
TCAGATCGGAAGAGCACACGTCTGAACTCCAGTCACATTACTCGATCTCG193380.11728694872465455TruSeq Adapter, Index 27 (97% over 39bp)
CTTCCGCGCAAATCAGATGCCAAAGGAGGCAACCTTAAATCAAAAACTCA186600.11317480934957358No Hit
CAACCAGGTAGCTATCCGCACGGAGACGTCCCCGACCCTAGGCCGCTAAG179340.10877154506298244No Hit
CCGCCGATAGCACTATGCCTGCAGGCTACATCCCGAAACCGAAGCTTCAG168510.10220303924703453No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)