FastQCFastQC Report
Fri 27 May 2022
SRR15089762_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15089762_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10755630
Sequences flagged as poor quality0
Sequence length101
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GAAGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTGTCAGTACGTGTAGA164070.1525433656605889Illumina Single End PCR Primer 1 (96% over 33bp)
GGGATGTACAATTCTAGACTCTTTGGTGGTGTAGAAATGTTAATAGGAAT139150.12937410453873924No Hit
GGGAGTAACGACCTGCATGAAACATGGAACGATTCGATAGCTGTCTTGCG130640.12146196921984113No Hit
GGGGATGTACAATTCTAGACTCTTTGGTGGTGTAGAAATGTTAATAGGAA116910.1086965617076824No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)