FastQCFastQC Report
Fri 27 May 2022
SRR15089762_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15089762_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10755630
Sequences flagged as poor quality0
Sequence length101
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTAGGAGAAAACCAATAATTTACTACTTTAGCTGGCATGCAATAAGAAT348190.32372813122057936No Hit
CTGACAGTTAAATACGAATGCCCCCAACTATCCCTATCAATCATTACCTC325300.30244625372944217No Hit
CTACTTCAAAAATAAAAGATTCAAATTCCTTTCAACTCTCTTTCAACTTT206640.19212263716769729No Hit
TCAGATCGGAAGAGCACACGTCTGAACTCCAGTCACATTACTCGATCTCG162920.15147415818506216TruSeq Adapter, Index 27 (97% over 39bp)
CGGGCTTTAAGGGTAGAGTATCAGATACACCTGAAGGATAAACTTGAAAT147110.13677487976064628No Hit
CGCCTCCTCCTTAAGTTGATAAAGATCACATGTTAAAAATAGATCCAGTC142290.13229350581974278No Hit
CCCCGCCACCCGCTGGATCGAAAAAAGTCGTATTAAAGTTTCTATCTGTT139230.12944848418921068No Hit
CTTTTCACCTACCTTTCGGTATTCTTTTCATCTTTCATTCACAATACACA138020.12832349197583032No Hit
CCCCAGTTAAACCACCAACTGTAAATAAAAAAACAAACCCCATAGCTCAA130550.12137829211306078No Hit
CGAATGCCCCCAACTATCCCTATCAATCATTACCTCAGCTCTAGAAACCA120390.11193207650318948No Hit
TCGGGCTTTAAGGGTAGAGTATCAGATACACCTGAAGGATAAACTTGAAA117280.10904056759111275No Hit
TCCCCGCCACCCGCTGGATCGAAAAAAGTCGTATTAAAGTTTCTATCTGT115030.10694863992160383No Hit
CCTACCTATGTCTTACTTTCGTATATTACATAAAATTCATTACTGCTGCC114700.1066418238634092No Hit
CCAGTCTACAATAAGCCATGATTTATCACTTGAATTAATGGGGTATCTAA113930.10592591972762172No Hit
CGCACGCTTGCTTGAAACACTCTAATTTCCTCAAGGTAAATGTCCCAAAT111160.10335052433004853No Hit
GCCATGTTTCGACTTAACACAAATTAGAATGCGAATTTTACAATTTTACA107640.10007781970930572No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)