FastQCFastQC Report
Fri 27 May 2022
SRR15089761_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15089761_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13534820
Sequences flagged as poor quality0
Sequence length101
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTAGGAGAAAACCAATAATTTACTACTTTAGCTGGCATGCAATAAGAAT426520.31512794407313877No Hit
CTGACAGTTAAATACGAATGCCCCCAACTATCCCTATCAATCATTACCTC309570.2287211798900909No Hit
CTACTTCAAAAATAAAAGATTCAAATTCCTTTCAACTCTCTTTCAACTTT297860.22006942094538384No Hit
CCCTGTCACACCTCAAGTTTTCGTGAATAGAATATCTATATTTGGACCAG204760.15128387374194854No Hit
CCAGTCTACAATAAGCCATGATTTATCACTTGAATTAATGGGGTATCTAA177650.1312540543575755No Hit
ACCATGTTTCGACTTAACACAAATTAGAATGCGAATTTTACAATTTTACA170390.1258901115788758No Hit
CGGGCTTTAAGGGTAGAGTATCAGATACACCTGAAGGATAAACTTGAAAT152400.11259846824708418No Hit
GCCATGTTTCGACTTAACACAAATTAGAATGCGAATTTTACAATTTTACA148360.10961357446940558No Hit
CTTTTCACCTACCTTTCGGTATTCTTTTCATCTTTCATTCACAATACACA147880.10925893362453289No Hit
CTGTCACACCTCAAGTTTTCGTGAATAGAATATCTATATTTGGACCAGAT147550.10901511804368288No Hit
CGAAGGATAACTTAGCTCATAAGATGCTACACACTTTTTAAAAGATGGAT145990.10786253529784659No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)