[2023-04-25 16:00:22,670] multiqc [DEBUG ] This is MultiQC v1.12 [2023-04-25 16:00:22,670] multiqc [DEBUG ] No MultiQC config found: /opt/anaconda/anaconda3/lib/python3.9/site-packages/multiqc_config.yaml [2023-04-25 16:00:22,670] multiqc [DEBUG ] No MultiQC config found: /home/shared/8TB_HDD_02/sarahyerrace/.multiqc_config.yaml [2023-04-25 16:00:22,670] multiqc [DEBUG ] No MultiQC config found: multiqc_config.yaml [2023-04-25 16:00:22,670] multiqc [DEBUG ] Command used: /opt/anaconda/anaconda3/bin/multiqc . [2023-04-25 16:00:22,982] multiqc [WARNING] MultiQC Version v1.14 now available! [2023-04-25 16:00:22,982] multiqc [DEBUG ] Command : /opt/anaconda/anaconda3/bin/multiqc . [2023-04-25 16:00:22,982] multiqc [DEBUG ] Working dir : /home/shared/8TB_HDD_02/sarahyerrace/Yerrace_metabarcoding/Output [2023-04-25 16:00:22,983] multiqc [DEBUG ] Template : default [2023-04-25 16:00:22,983] multiqc [DEBUG ] Running Python 3.9.7 (default, Sep 16 2021, 13:09:58) [GCC 7.5.0] [2023-04-25 16:00:22,984] multiqc [DEBUG ] Analysing modules: custom_content, ccs, ngsderive, purple, conpair, lima, peddy, somalier, methylQA, mosdepth, phantompeakqualtools, qualimap, preseq, quast, qorts, rna_seqc, rockhopper, rsem, rseqc, busco, bustools, goleft_indexcov, gffcompare, disambiguate, supernova, deeptools, sargasso, verifybamid, mirtrace, happy, mirtop, sambamba, homer, hops, macs2, theta2, snpeff, gatk, htseq, bcftools, featureCounts, fgbio, dragen, dedup, pbmarkdup, damageprofiler, biobambam2, jcvi, mtnucratio, picard, vep, sentieon, prokka, qc3C, nanostat, samblaster, samtools, sexdeterrmine, eigenstratdatabasetools, bamtools, jellyfish, vcftools, longranger, stacks, varscan2, snippy, bbmap, bismark, biscuit, hicexplorer, hicup, hicpro, salmon, kallisto, slamdunk, star, hisat2, tophat, bowtie2, bowtie1, snpsplit, odgi, pangolin, kat, leehom, adapterRemoval, clipandmerge, cutadapt, flexbar, kaiju, kraken, malt, trimmomatic, sickle, skewer, sortmerna, biobloomtools, fastq_screen, afterqc, fastp, fastqc, pychopper, pycoqc, minionqc, multivcfanalyzer, clusterflow, checkqc, bcl2fastq, bclconvert, interop, ivar, flash, seqyclean, optitype, whatshap [2023-04-25 16:00:22,984] multiqc [DEBUG ] Using temporary directory for creating report: /tmp/tmpos_1bta3 [2023-04-25 16:00:23,073] multiqc [INFO ] Search path : /home/shared/8TB_HDD_02/sarahyerrace/Yerrace_metabarcoding/Output [2023-04-25 16:00:23,077] multiqc [DEBUG ] Ignoring directory as matched fn_ignore_dirs: ./multiqc_data [2023-04-25 16:00:23,097] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: JV173_UniCOI_Tornabene_S043447.1.R1_fastqc.html [2023-04-25 16:00:23,098] 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16:00:23,787] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: JV173_UniCOI_Tornabene_S043451.1.R1_fastqc.html [2023-04-25 16:00:23,795] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: JV173_UniCOI_Tornabene_S043451.1.R2_fastqc.html [2023-04-25 16:00:23,795] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: JV173_UniCOI_Tornabene_S043451.1.R2_fastqc.html [2023-04-25 16:00:23,796] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: JV173_UniCOI_Tornabene_S043451.1.R2_fastqc.html [2023-04-25 16:00:23,797] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: JV173_UniCOI_Tornabene_S043451.1.R2_fastqc.html [2023-04-25 16:00:23,797] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: 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nanostat because it exceeded search pattern filesize limit: JV173_UniCOI_Tornabene_S043451.1.R2_fastqc.html [2023-04-25 16:00:23,868] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: JV173_UniCOI_Tornabene_S043448.1.R1_fastqc.html [2023-04-25 16:00:23,869] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: JV173_UniCOI_Tornabene_S043448.1.R1_fastqc.html [2023-04-25 16:00:23,869] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: JV173_UniCOI_Tornabene_S043448.1.R1_fastqc.html [2023-04-25 16:00:23,870] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: JV173_UniCOI_Tornabene_S043448.1.R1_fastqc.html [2023-04-25 16:00:23,870] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: JV173_UniCOI_Tornabene_S043448.1.R1_fastqc.html [2023-04-25 16:00:23,870] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: JV173_UniCOI_Tornabene_S043448.1.R1_fastqc.html [2023-04-25 16:00:23,870] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: JV173_UniCOI_Tornabene_S043448.1.R1_fastqc.html [2023-04-25 16:00:23,870] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: JV173_UniCOI_Tornabene_S043448.1.R1_fastqc.html [2023-04-25 16:00:23,870] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: JV173_UniCOI_Tornabene_S043448.1.R1_fastqc.html [2023-04-25 16:00:23,870] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: JV173_UniCOI_Tornabene_S043448.1.R1_fastqc.html [2023-04-25 16:00:23,932] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: JV173_UniCOI_Tornabene_S043448.1.R1_fastqc.html [2023-04-25 16:00:25,145] multiqc.plots.linegraph [DEBUG ] Using matplotlib version 3.4.3 [2023-04-25 16:00:25,146] multiqc.plots.bargraph [DEBUG ] Using matplotlib version 3.4.3 [2023-04-25 16:00:25,268] multiqc.modules.fastqc.fastqc [INFO ] Found 10 reports [2023-04-25 16:00:25,373] multiqc [INFO ] Compressing plot data [2023-04-25 16:00:25,465] multiqc [WARNING] Previous MultiQC output found! Adjusting filenames.. [2023-04-25 16:00:25,465] multiqc [WARNING] Use -f or --force to overwrite existing reports instead [2023-04-25 16:00:25,465] multiqc [INFO ] Report : multiqc_report_1.html [2023-04-25 16:00:25,465] multiqc [INFO ] Data : multiqc_data_1 [2023-04-25 16:00:25,465] multiqc [DEBUG ] Moving data file from '/tmp/tmpos_1bta3/multiqc_data' to '/home/shared/8TB_HDD_02/sarahyerrace/Yerrace_metabarcoding/Output/multiqc_data_1' [2023-04-25 16:00:25,657] multiqc [INFO ] MultiQC complete