Reading tree PAUP_2 Executing blformat command... Number of sites in sequences set to 1698 Branch lengths assumed to be in units of numbers of substitutions per site All branch lengths multipled by the 1698 sites in the sequence Branch lengths rounded to nearest integer (This may not be a good idea when using CALIBRATE on ultrametric user supplied input trees. Use ROUND=NO then) 7 zero-length branches collapsed Defining clade name: root Unfixing age of root (the age of this node WILL be estimated in future searches) Fixing age of CY011888_A_New_York_716_1994_H3N2_1994 at 20.000000 (The age of this node will no longer be estimated.) (This command overides any previous age constraints for this node.) (The total number of fixed ages is now 0) Fixing age of EU856894_A_Hong_Kong_CUHK20217_1997_H3N2_1997 at 17.000000 (The age of this node will no longer be estimated.) (This command overides any previous age constraints for this node.) (The total number of fixed ages is now 0) Fixing age of EU856893_A_Hong_Kong_CUHK20213_1997_H3N2_1997 at 17.000000 (The age of this node will no longer be estimated.) (This command overides any previous age constraints for this node.) (The total number of fixed ages is now 0) Fixing age of EU856882_A_Hong_Kong_CUHK18230_1998_H3N2_1998 at 16.000000 (The age of this node will no longer be estimated.) (This command overides any previous age constraints for this node.) (The total number of fixed ages is now 0) Fixing age of DQ487341_A_Moscow_10_1999_H3N2_1999 at 15.000000 (The age of this node will no longer be estimated.) (This command overides any previous age constraints for this node.) (The total number of fixed ages is now 0) Fixing age of EU856852_A_Hong_Kong_CUHK13033_2001_H3N2_2001 at 13.000000 (The age of this node will no longer be estimated.) (This command overides any previous age constraints for this node.) (The total number of fixed ages is now 0) Fixing age of EU856865_A_Hong_Kong_CUHK13658_2001_H3N2_2001 at 13.000000 (The age of this node will no longer be estimated.) (This command overides any previous age constraints for this node.) (The total number of fixed ages is now 0) Fixing age of EU856971_A_Hong_Kong_CUHK31490_1999_H3N2_1999 at 15.000000 (The age of this node will no longer be estimated.) (This command overides any previous age constraints for this node.) (The total number of fixed ages is now 0) Fixing age of EU856862_A_Hong_Kong_CUHK13483_2003_H3N2_2003 at 11.000000 (The age of this node will no longer be estimated.) (This command overides any previous age constraints for this node.) (The total number of fixed ages is now 0) Fixing age of EU856984_A_Hong_Kong_CUHK33851_2004_H3N2_2004 at 10.000000 (The age of this node will no longer be estimated.) (This command overides any previous age constraints for this node.) (The total number of fixed ages is now 0) Fixing age of CY038743_A_Hong_Kong_HKU71_2005_H3N2_2005 at 9.000000 (The age of this node will no longer be estimated.) (This command overides any previous age constraints for this node.) (The total number of fixed ages is now 0) Fixing age of EU857080_A_Hong_Kong_CUHK69904_2006_H3N2_2006 at 8.000000 (The age of this node will no longer be estimated.) (This command overides any previous age constraints for this node.) (The total number of fixed ages is now 0) Fixing age of EU199359_A_Pennsylvania_05_2007_H3N2_2007 at 7.000000 (The age of this node will no longer be estimated.) (This command overides any previous age constraints for this node.) (The total number of fixed ages is now 0) Fixing age of EU716426_A_Uruguay_716_2007_H3N2_2007 at 7.000000 (The age of this node will no longer be estimated.) (This command overides any previous age constraints for this node.) (The total number of fixed ages is now 0) Fixing age of EU199366_A_Brisbane_10_2007_H3N2_2007 at 7.000000 (The age of this node will no longer be estimated.) (This command overides any previous age constraints for this node.) (The total number of fixed ages is now 0) Fixing age of FJ532080_A_California_09_2008_H3N2_2008 at 6.000000 (The age of this node will no longer be estimated.) (This command overides any previous age constraints for this node.) (The total number of fixed ages is now 0) Fixing age of FJ966245_A_Victoria_502_2009_H3N2_2009 at 5.000000 (The age of this node will no longer be estimated.) (This command overides any previous age constraints for this node.) (The total number of fixed ages is now 0) Fixing age of A_Kenya_078_2010_H3N2_2010 at 4.000000 (The age of this node will no longer be estimated.) (This command overides any previous age constraints for this node.) (The total number of fixed ages is now 0) Fixing age of A_Nicaragua_5754_07_2013_H3N2_2013 at 1.000000 (The age of this node will no longer be estimated.) (This command overides any previous age constraints for this node.) (The total number of fixed ages is now 0) Fixing age of A_Czech_Republic_1_2014_H3N2_2014 at 0.000000 (The age of this node will no longer be estimated.) (This command overides any previous age constraints for this node.) (The total number of fixed ages is now 0) Fixing age of A_Hokkaido_M1_2014_H3N2_2014 at 0.000000 (The age of this node will no longer be estimated.) (This command overides any previous age constraints for this node.) (The total number of fixed ages is now 0) Fixing age of A_Ontario_41_2014_H3N2_2014 at 0.000000 (The age of this node will no longer be estimated.) (This command overides any previous age constraints for this node.) (The total number of fixed ages is now 0) Fixing age of A_Delhi_1191_2013_H3N2_2013 at 1.000000 (The age of this node will no longer be estimated.) (This command overides any previous age constraints for this node.) (The total number of fixed ages is now 0) Fixing age of A_Singapore_H2012_779_2012_H3N2_2012 at 2.000000 (The age of this node will no longer be estimated.) (This command overides any previous age constraints for this node.) (The total number of fixed ages is now 0) Fixing age of A_Arizona_M18_2012_H3N2_2012 at 2.000000 (The age of this node will no longer be estimated.) (This command overides any previous age constraints for this node.) (The total number of fixed ages is now 0) Fixing age of A_Uttarakhand_8853_2011_H3N2_2011 at 3.000000 (The age of this node will no longer be estimated.) (This command overides any previous age constraints for this node.) (The total number of fixed ages is now 0) Fixing age of A_Moscow_RII05_2012_H3N2_2012 at 2.000000 (The age of this node will no longer be estimated.) (This command overides any previous age constraints for this node.) (The total number of fixed ages is now 0) Fixing age of A_Tennessee_F2084c83_2011_H3N2_2011 at 3.000000 (The age of this node will no longer be estimated.) (This command overides any previous age constraints for this node.) (The total number of fixed ages is now 0) Fixing age of A_New_York_3135_2009_H3N2_2009 at 5.000000 (The age of this node will no longer be estimated.) (This command overides any previous age constraints for this node.) (The total number of fixed ages is now 0) Fixing age of A_Thailand_CU_H1071_2009_H3N2_2009 at 5.000000 (The age of this node will no longer be estimated.) (This command overides any previous age constraints for this node.) (The total number of fixed ages is now 0) Fixing age of A_Singapore_KK581_2011_H3N2_2011 at 3.000000 (The age of this node will no longer be estimated.) (This command overides any previous age constraints for this node.) (The total number of fixed ages is now 0) Fixing age of A_Belgrade_WRAIR2379N_2010_H3N2_2010 at 4.000000 (The age of this node will no longer be estimated.) (This command overides any previous age constraints for this node.) (The total number of fixed ages is now 0) Fixing age of EU857082_A_Hong_Kong_CUHK7047_2005_H3N2_2005 at 9.000000 (The age of this node will no longer be estimated.) (This command overides any previous age constraints for this node.) (The total number of fixed ages is now 0) Fixing age of YGSIV1044_Sw_Binh_Duong_03_08_2010 at 4.000000 (The age of this node will no longer be estimated.) (This command overides any previous age constraints for this node.) (The total number of fixed ages is now 0) Fixing age of YGSIV1046_Sw_Binh_Duong_03_10_2010 at 4.000000 (The age of this node will no longer be estimated.) (This command overides any previous age constraints for this node.) (The total number of fixed ages is now 0) Fixing age of YGSIV1427_SW_HK_2857_2011 at 3.000000 (The age of this node will no longer be estimated.) (This command overides any previous age constraints for this node.) (The total number of fixed ages is now 0) Fixing age of YGSIV1522_SW_HK_1071_2012 at 2.000000 (The age of this node will no longer be estimated.) (This command overides any previous age constraints for this node.) (The total number of fixed ages is now 0) Fixing age of YGSIV1534_SW_HK_2454_2012 at 2.000000 (The age of this node will no longer be estimated.) (This command overides any previous age constraints for this node.) (The total number of fixed ages is now 0) Fixing age of YGSIV1352_SW_GX_2803_2011 at 3.000000 (The age of this node will no longer be estimated.) (This command overides any previous age constraints for this node.) (The total number of fixed ages is now 0) Fixing age of YGSIV1369_SW_GX_NS3106_2011 at 3.000000 (The age of this node will no longer be estimated.) (This command overides any previous age constraints for this node.) (The total number of fixed ages is now 0) Fixing age of YGSIV1370_SW_GX_NS3108_2011 at 3.000000 (The age of this node will no longer be estimated.) (This command overides any previous age constraints for this node.) (The total number of fixed ages is now 0) Fixing age of YGSIV1052_Sw_GX_NS2783_2010 at 4.000000 (The age of this node will no longer be estimated.) (This command overides any previous age constraints for this node.) (The total number of fixed ages is now 0) Fixing age of YGSIV1598_SW_HK_NS2733_2012 at 2.000000 (The age of this node will no longer be estimated.) (This command overides any previous age constraints for this node.) (The total number of fixed ages is now 0) Fixing age of YGSIV1165_Sw_HK_2503_2011 at 3.000000 (The age of this node will no longer be estimated.) (This command overides any previous age constraints for this node.) (The total number of fixed ages is now 0) Fixing age of YGSIV1166_Sw_HK_NS2439_2011 at 3.000000 (The age of this node will no longer be estimated.) (This command overides any previous age constraints for this node.) (The total number of fixed ages is now 0) Fixing age of YGSIV1315_SW_GD_3767_2011 at 3.000000 (The age of this node will no longer be estimated.) (This command overides any previous age constraints for this node.) (The total number of fixed ages is now 0) Fixing age of YGSIV1586_SW_GX_NS2394_2012 at 2.000000 (The age of this node will no longer be estimated.) (This command overides any previous age constraints for this node.) (The total number of fixed ages is now 0) Fixing age of YGSIV1416_SW_HK_NS2810_2011 at 3.000000 (The age of this node will no longer be estimated.) (This command overides any previous age constraints for this node.) (The total number of fixed ages is now 0) Fixing age of YGSIV1597_SW_HK_NS2698_2012 at 2.000000 (The age of this node will no longer be estimated.) (This command overides any previous age constraints for this node.) (The total number of fixed ages is now 0) Fixing age of YGSIV1447_SW_HK_3700_2011 at 3.000000 (The age of this node will no longer be estimated.) (This command overides any previous age constraints for this node.) (The total number of fixed ages is now 0) Fixing age of YGSIV1501_SW_HK_168_2012 at 2.000000 (The age of this node will no longer be estimated.) (This command overides any previous age constraints for this node.) (The total number of fixed ages is now 0) Fixing age of YGSIV1338_SW_GD_1599_2012 at 2.000000 (The age of this node will no longer be estimated.) (This command overides any previous age constraints for this node.) (The total number of fixed ages is now 0) Fixing age of YGSIV1507_SW_HK_459_2012 at 2.000000 (The age of this node will no longer be estimated.) (This command overides any previous age constraints for this node.) (The total number of fixed ages is now 0) Fixing age of YGSIV1527_SW_HK_NS1651_2012 at 2.000000 (The age of this node will no longer be estimated.) (This command overides any previous age constraints for this node.) (The total number of fixed ages is now 0) Fixing age of YGSIV1574_Sw_GD_2919_2012 at 2.000000 (The age of this node will no longer be estimated.) (This command overides any previous age constraints for this node.) (The total number of fixed ages is now 0) Fixing age of YGSIV1603_SW_HK_3280_2012 at 2.000000 (The age of this node will no longer be estimated.) (This command overides any previous age constraints for this node.) (The total number of fixed ages is now 0) Fixing age of YGSIV1407_SW_GX_NS1409_2012 at 2.000000 (The age of this node will no longer be estimated.) (This command overides any previous age constraints for this node.) (The total number of fixed ages is now 0) Fixing age of YGSIV1562_Sw_GD_NS2701_2012 at 2.000000 (The age of this node will no longer be estimated.) (This command overides any previous age constraints for this node.) (The total number of fixed ages is now 0) Fixing age of YGSIV1569_Sw_GD_NS2892_2012 at 2.000000 (The age of this node will no longer be estimated.) (This command overides any previous age constraints for this node.) (The total number of fixed ages is now 0) Fixing age of YGSIV1405_SW_GX_650_2012 at 2.000000 (The age of this node will no longer be estimated.) (This command overides any previous age constraints for this node.) (The total number of fixed ages is now 0) Fixing age of YGSIV1347_SW_GX_2242_2011 at 3.000000 (The age of this node will no longer be estimated.) (This command overides any previous age constraints for this node.) (The total number of fixed ages is now 0) Fixing age of YGSIV1404_SW_GX_508_2012 at 2.000000 (The age of this node will no longer be estimated.) (This command overides any previous age constraints for this node.) (The total number of fixed ages is now 0) Fixing age of YGSIV1441_SW_HK_3238_2011 at 3.000000 (The age of this node will no longer be estimated.) (This command overides any previous age constraints for this node.) (The total number of fixed ages is now 0) ********************* WARNING ********************** You are trying to estimate the age of the root but with the given constraints it is possible that a range of solutions exist **************************************************** ---------------------------------------- LINEAGE RATE/TIME ANALYSIS FOR TREE PAUP_2 Method = Langley and Fitch Optimization via Powell's method ---------------------------------------- Substitution Model Rates are equal across sites Global/Local Search Parameters Number of searches from random starts = 1 Number of restarts after each search = 1 Local perturbation on restarts = 0.01 Local fractional tolerance after restarts = 0.01 Optimization parameters Maximum number of iterations = 500 Function Tolerance = 1e-08 linminOffset = 0.05 Contract Factor = 0.1 Max number of contract iterations = 10 Length of tree input = 682 Number of taxa = 64 Number of sites in sequences = 1698 ---------------------------------------- Starting optimization (random starting point 1) ...Checking the starting point...(for some barrier constant)... ...Passed...now optimizing... ...Initial solution=245.404873 ......starting perturbation 1 ......solution for perturbation 1=245.404873...best=245.404873 *** Using analytical formula for gradient in check gradient step *** ...checking gradient of the solution... Norm for free parameters in gradient (10.607648) should be less than cutoff (0.534133) Checking active constraints for node times only (activeEpsilon=0.001000 and window [actEps*rootage]=0.022304) Param Estimate Gradient Active* Taxon [1] 22.304482 0.000466 0 root [2] 19.441203 0.001059 0 [3] 18.394595 0.001007 0 [4] 17.144431 0.002418 0 [5] 16.642890 0.001861 0 [6] 16.051500 0.003662 0 [7] 15.727290 0.002724 0 [8] 15.422617 0.000143 0 [9] 11.915352 0.000299 0 [10] 11.437733 0.000080 0 [11] 10.340940 0.000033 0 [12] 9.246936 -0.001871 0 [13] 9.140003 -0.000123 0 [14] 8.665209 0.000065 0 [15] 7.607649 0.000051 0 [16] 7.486943 0.000100 0 [17] 7.449325 0.000264 0 [18] 6.541445 0.001058 0 [19] 6.250227 0.000727 0 [20] 5.335267 0.000184 0 [21] 3.967139 0.000766 0 [22] 3.179963 0.000627 0 [23] 2.880065 0.000972 0 [24] 2.013751 0.000160 0 [25] 1.258663 0.000100 0 [26] 2.664956 0.000100 0 [27] 3.788151 0.000101 0 [28] 5.858037 0.000486 0 [29] 5.474610 0.000157 0 [30] 4.563364 0.000100 0 [31] 10.054564 0.000173 0 [32] 6.283664 0.000341 0 [33] 4.157776 0.000100 0 [34] 5.145632 0.000389 0 [35] 3.317025 0.000748 0 [36] 3.182595 0.000101 0 [37] 4.453305 0.000671 0 [38] 3.572507 0.000250 0 [39] 3.256614 0.000100 0 [40] 4.154323 0.000336 0 [41] 3.836884 0.000198 0 [42] 3.593886 0.001646 0 [43] 3.203523 0.000200 0 [44] 3.440333 0.000769 0 [45] 3.003371 0.000099 0 [46] 3.266063 0.000460 0 [47] 2.784178 0.000427 0 [48] 2.548633 0.000098 0 [49] 3.000000 -10.607646 0 Gradients for rate parameters (if any) Param Estimate Gradient [50] 6.090638 -0.000000 ------------------------------------------------------------------------------ *Key +1 = maximum age constraint is reached (gradient may not be 0) -1 = minimum age constraint is reached (gradient may not be 0) 0 = no constraint present or constraint not reached (gradient should be 0) (note that small gradient values (< |0.000053|) are not examined with respect to active constraints to avoid spurious roundoff issues) *** Gradient check FAILED *** Optimization replicates used in first pass...73 Optimization replicates used in LAST restart...19 Using optimization from starting point 1 as best estimate Test of molecular clock on soln. 1 (best): Chi squared = 102.025928 (df=63) Parameter estimates: 1 Times p[ 1] 0.0131 p[ 2] 0.0114 p[ 3] 0.0108 p[ 4] 0.0101 p[ 5] 0.0098 p[ 6] 0.00945 p[ 7] 0.00926 p[ 8] 0.00908 p[ 9] 0.00702 p[10] 0.00674 p[11] 0.00609 p[12] 0.00545 p[13] 0.00538 p[14] 0.0051 p[15] 0.00448 p[16] 0.00441 p[17] 0.00439 p[18] 0.00385 p[19] 0.00368 p[20] 0.00314 p[21] 0.00234 p[22] 0.00187 p[23] 0.0017 p[24] 0.00119 p[25] 0.000741 p[26] 0.00157 p[27] 0.00223 p[28] 0.00345 p[29] 0.00322 p[30] 0.00269 p[31] 0.00592 p[32] 0.0037 p[33] 0.00245 p[34] 0.00303 p[35] 0.00195 p[36] 0.00187 p[37] 0.00262 p[38] 0.0021 p[39] 0.00192 p[40] 0.00245 p[41] 0.00226 p[42] 0.00212 p[43] 0.00189 p[44] 0.00203 p[45] 0.00177 p[46] 0.00192 p[47] 0.00164 p[48] 0.0015 p[49] 0.00177 Rates (substitutions per site per unit time) p[50] 0.00359 FAILED(2) __________________ Result codes: PASSED = OK FAILED(1) = Optimization routine returned error FAILED(2) = Solution's gradient was not 0 __________________ Obj-> -245.405 [Printing tree 1] [CHRONOGRAM of tree PAUP_2] Tree is so large that it has been compressed horizontally and resolution may be lost: WINWIDTH=96 treeWidth=43 +----CY011888_A_New_York_716_1994_H3N2_1994 | +root+----EU856894_A_Hong_Kong_CUHK20217_1997_H3N2_1997 | | +----+3+--EU856893_A_Hong_Kong_CUHK20213_1997_H3N2_1997 | | +-+5+--EU856882_A_Hong_Kong_CUHK18230_1998_H3N2_1998 | | +-+7---DQ487341_A_Moscow_10_1999_H3N2_1999 || ++9------EU856852_A_Hong_Kong_CUHK13033_2001_H3N2_2001 || ++11----EU856865_A_Hong_Kong_CUHK13658_2001_H3N2_2001 || |+-EU856971_A_Hong_Kong_CUHK31490_1999_H3N2_1999 +|13 | +--EU856862_A_Hong_Kong_CUHK13483_2003_H3N2_2003 | | +15 |+---EU856984_A_Hong_Kong_CUHK33851_2004_H3N2_2004 | || | || +-CY038743_A_Hong_Kong_HKU71_2005_H3N2_2005 | || | | || +-+22EU857080_A_Hong_Kong_CUHK69904_2006_H3N2_2006 +------+17| | || | +24--EU199359_A_Pennsylvania_05_2007_H3N2_2007 || | || || | || +-EU716426_A_Uruguay_716_2007_H3N2_2007 || | ++2629 || | | +-EU199366_A_Brisbane_10_2007_H3N2_2007 || | | | || | | +---FJ532080_A_California_09_2008_H3N2_2008 ++19 +-|28 | | | +---FJ966245_A_Victoria_502_2009_H3N2_2009 | | | | | | | | +---A_Kenya_078_2010_H3N2_2010 | | +32 | | | | | | +--A_Nicaragua_5754_07_2013_H3N2_2013 | | | | | +-+42 | | | | | | |+---A_Czech_Republic_1_2014_H3N2_2014 | | | | | | ++44 | | +-+3437 +41+---A_Hokkaido_M1_2014_H3N2_2014 | | ||| | | | ||| +------A_Ontario_41_2014_H3N2_2014 | | ||| +47 | | ||| +-+40--A_Delhi_1191_2013_H3N2_2013 +-+21 ||| | | | ||| | |--A_Singapore_H2012_779_2012_H3N2_2012 | ||+--+39 | ++36 | +--A_Arizona_M18_2012_H3N2_2012 | | | | | +--A_Uttarakhand_8853_2011_H3N2_2011 | | +53 | | +----A_Moscow_RII05_2012_H3N2_2012 | | | +------A_Tennessee_F2084c83_2011_H3N2_2011 | | | +56A_New_York_3135_2009_H3N2_2009 | | | |+-A_Thailand_CU_H1071_2009_H3N2_2009 | ++60 | | +---A_Singapore_KK581_2011_H3N2_2011 | +-+62 | +-A_Belgrade_WRAIR2379N_2010_H3N2_2010 | |+--EU857082_A_Hong_Kong_CUHK7047_2005_H3N2_2005 || || +YGSIV1044_Sw_Binh_Duong_03_08_2010 || +---+68 ++65 | +YGSIV1046_Sw_Binh_Duong_03_10_2010 | | | | +-YGSIV1427_SW_HK_2857_2011 | | +--+72 | | | |+--YGSIV1522_SW_HK_1071_2012 +------+67 ++74 | | +--YGSIV1534_SW_HK_2454_2012 | | | | +-YGSIV1352_SW_GX_2803_2011 | |+-+79 | || +-YGSIV1369_SW_GX_NS3106_2011 +-+71+81 || +-YGSIV1370_SW_GX_NS3108_2011 || ||+YGSIV1052_Sw_GX_NS2783_2010 ||| |++84--YGSIV1598_SW_HK_NS2733_2012 ||| ||+86YGSIV1165_Sw_HK_2503_2011 ||| ++77-YGSIV1166_Sw_HK_NS2439_2011 | | +-YGSIV1315_SW_GD_3767_2011 | | | +---YGSIV1586_SW_GX_NS2394_2012 | | | +-YGSIV1416_SW_HK_NS2810_2011 | | | +---YGSIV1597_SW_HK_NS2698_2012 | | | +-YGSIV1447_SW_HK_3700_2011 | | | +101YGSIV1501_SW_HK_168_2012 | | | +---YGSIV1338_SW_GD_1599_2012 | | +-+91-YGSIV1507_SW_HK_459_2012 | |+--YGSIV1527_SW_HK_NS1651_2012 |+109 |+--YGSIV1574_Sw_GD_2919_2012 | |---YGSIV1603_SW_HK_3280_2012 |108 |+--YGSIV1407_SW_GX_NS1409_2012 |+115 ||+-YGSIV1562_Sw_GD_NS2701_2012 |11117 | +-YGSIV1569_Sw_GD_NS2892_2012 | |---YGSIV1405_SW_GX_650_2012 | |+YGSIV1347_SW_GX_2242_2011 |+122 |+--YGSIV1404_SW_GX_508_2012 | |-YGSIV1441_SW_HK_3238_2011 | +-------YGSIV1526_SW_HK_1284_2012 [Printing tree 1] [RATOGRAM of tree PAUP_2] Tree is so large that it has been compressed horizontally and resolution may be lost: WINWIDTH=96 treeWidth=43 +-CY011888_A_New_York_716_1994_H3N2_1994 | +roEU856894_A_Hong_Kong_CUHK20217_1997_H3N2_1997 || ++3-EU856893_A_Hong_Kong_CUHK20213_1997_H3N2_1997 || ++5-EU856882_A_Hong_Kong_CUHK18230_1998_H3N2_1998 || ++7-DQ487341_A_Moscow_10_1999_H3N2_1999 || ++9-EU856852_A_Hong_Kong_CUHK13033_2001_H3N2_2001 || ++11EU856865_A_Hong_Kong_CUHK13658_2001_H3N2_2001 || ||+-EU856971_A_Hong_Kong_CUHK31490_1999_H3N2_1999 ++13 ||+-EU856862_A_Hong_Kong_CUHK13483_2003_H3N2_2003 ||| ++15-EU856984_A_Hong_Kong_CUHK33851_2004_H3N2_2004 ||| ||| +-CY038743_A_Hong_Kong_HKU71_2005_H3N2_2005 ||| | |||++22EU857080_A_Hong_Kong_CUHK69904_2006_H3N2_2006 ++17|| |||++24EU199359_A_Pennsylvania_05_2007_H3N2_2007 ||| || ||| || +-EU716426_A_Uruguay_716_2007_H3N2_2007 ||| ++2629 ||| ||+-EU199366_A_Brisbane_10_2007_H3N2_2007 ||| || ||| ||+-FJ532080_A_California_09_2008_H3N2_2008 ++19 ++28 || ||+-FJ966245_A_Victoria_502_2009_H3N2_2009 || ||| || ||| +-A_Kenya_078_2010_H3N2_2010 || ++32| || || | +-A_Nicaragua_5754_07_2013_H3N2_2013 || || | ++42 || || | ||+-A_Czech_Republic_1_2014_H3N2_2014 || || | |++44 || ++3437+41-A_Hokkaido_M1_2014_H3N2_2014 || ||| || || ||| ||+-A_Ontario_41_2014_H3N2_2014 || ||| |++47 || |||++40-A_Delhi_1191_2013_H3N2_2013 ++21 ||||| | |||||-A_Singapore_H2012_779_2012_H3N2_2012 | ||++39 | ++36+-A_Arizona_M18_2012_H3N2_2012 | | | | | |+-A_Uttarakhand_8853_2011_H3N2_2011 | | ++53 | | +-A_Moscow_RII05_2012_H3N2_2012 | | | |+-A_Tennessee_F2084c83_2011_H3N2_2011 | || | ++5A_New_York_3135_2009_H3N2_2009 | | | |+-A_Thailand_CU_H1071_2009_H3N2_2009 | ++60 | |+-A_Singapore_KK581_2011_H3N2_2011 | ++62 | +-A_Belgrade_WRAIR2379N_2010_H3N2_2010 | |+-EU857082_A_Hong_Kong_CUHK7047_2005_H3N2_2005 || || +-YGSIV1044_Sw_Binh_Duong_03_08_2010 ||++68 ++65-YGSIV1046_Sw_Binh_Duong_03_10_2010 || || +-YGSIV1427_SW_HK_2857_2011 ||++72 ||||+-YGSIV1522_SW_HK_1071_2012 ++67+74 || +-YGSIV1534_SW_HK_2454_2012 || || +-YGSIV1352_SW_GX_2803_2011 ||++79 ||||+-YGSIV1369_SW_GX_NS3106_2011 ++71+81 || +-YGSIV1370_SW_GX_NS3108_2011 || ||+-YGSIV1052_Sw_GX_NS2783_2010 ||| |++84YGSIV1598_SW_HK_NS2733_2012 |||| ||++8YGSIV1165_Sw_HK_2503_2011 || | ++77-YGSIV1166_Sw_HK_NS2439_2011 | |+-YGSIV1315_SW_GD_3767_2011 || |+-YGSIV1586_SW_GX_NS2394_2012 || |+-YGSIV1416_SW_HK_NS2810_2011 || |+-YGSIV1597_SW_HK_NS2698_2012 || ||+-YGSIV1447_SW_HK_3700_2011 ||| |++1YGSIV1501_SW_HK_168_2012 ||| ||+-YGSIV1338_SW_GD_1599_2012 || ++9YGSIV1507_SW_HK_459_2012 | | +-YGSIV1527_SW_HK_NS1651_2012 |++109 ||+-YGSIV1574_Sw_GD_2919_2012 || ||+-YGSIV1603_SW_HK_3280_2012 |+108 |||+-YGSIV1407_SW_GX_NS1409_2012 ||++115 ||||+-YGSIV1562_Sw_GD_NS2701_2012 |++11117 | | +-YGSIV1569_Sw_GD_NS2892_2012 | | | |-YGSIV1405_SW_GX_650_2012 | | | |+-YGSIV1347_SW_GX_2242_2011 | ++122 | +-YGSIV1404_SW_GX_508_2012 | |-YGSIV1441_SW_HK_3238_2011 | +-YGSIV1526_SW_HK_1284_2012 [Printing tree 1] [TREE DESCRIPTION of tree PAUP_2] tree PAUP_2 = (CY011888_A_New_York_716_1994_H3N2_1994:2.304482,(EU856894_A_Hong_Kong_CUHK20217_1997_H3N2_1997:2.441203,(EU856893_A_Hong_Kong_CUHK20213_1997_H3N2_1997:1.394595,(EU856882_A_Hong_Kong_CUHK18230_1998_H3N2_1998:1.144431,(DQ487341_A_Moscow_10_1999_H3N2_1999:1.642890,(EU856852_A_Hong_Kong_CUHK13033_2001_H3N2_2001:3.051500,(EU856865_A_Hong_Kong_CUHK13658_2001_H3N2_2001:2.727290,(EU856971_A_Hong_Kong_CUHK31490_1999_H3N2_1999:0.422617,(EU856862_A_Hong_Kong_CUHK13483_2003_H3N2_2003:0.915352,(EU856984_A_Hong_Kong_CUHK33851_2004_H3N2_2004:1.437733,((CY038743_A_Hong_Kong_HKU71_2005_H3N2_2005:0.246936,(EU857080_A_Hong_Kong_CUHK69904_2006_H3N2_2006:1.140003,(EU199359_A_Pennsylvania_05_2007_H3N2_2007:1.665209,((EU716426_A_Uruguay_716_2007_H3N2_2007:0.486943,EU199366_A_Brisbane_10_2007_H3N2_2007:0.486943):0.120705,(FJ532080_A_California_09_2008_H3N2_2008:1.449325,(FJ966245_A_Victoria_502_2009_H3N2_2009:1.541445,((A_Kenya_078_2010_H3N2_2010:1.335267,((((A_Nicaragua_5754_07_2013_H3N2_2013:1.013751,(A_Czech_Republic_1_2014_H3N2_2014:1.258663,A_Hokkaido_M1_2014_H3N2_2014:1.258663):0.755088):0.866314,(A_Ontario_41_2014_H3N2_2014:2.664956,A_Delhi_1191_2013_H3N2_2013:1.664956):0.215109):0.299898,A_Singapore_H2012_779_2012_H3N2_2012:1.179963,A_Arizona_M18_2012_H3N2_2012:1.179963):0.787176,(A_Uttarakhand_8853_2011_H3N2_2011:0.788151,A_Moscow_RII05_2012_H3N2_2012:1.788151):0.178987):1.368128):0.914960,(A_Tennessee_F2084c83_2011_H3N2_2011:2.858037,A_New_York_3135_2009_H3N2_2009:0.858037,(A_Thailand_CU_H1071_2009_H3N2_2009:0.474610,(A_Singapore_KK581_2011_H3N2_2011:1.563364,A_Belgrade_WRAIR2379N_2010_H3N2_2010:0.563364):0.911246):0.383427):0.392190):0.291218):0.907880):0.158323):1.057560):0.474794):0.106932):1.094005,(EU857082_A_Hong_Kong_CUHK7047_2005_H3N2_2005:1.054564,((YGSIV1044_Sw_Binh_Duong_03_08_2010:0.157776,YGSIV1046_Sw_Binh_Duong_03_10_2010:0.157776):2.125888,((YGSIV1427_SW_HK_2857_2011:0.317025,(YGSIV1522_SW_HK_1071_2012:1.182595,YGSIV1534_SW_HK_2454_2012:1.182595):0.134430):1.828607,((YGSIV1352_SW_GX_2803_2011:0.572507,(YGSIV1369_SW_GX_NS3106_2011:0.256614,YGSIV1370_SW_GX_NS3108_2011:0.256614):0.315893):0.880799,(YGSIV1052_Sw_GX_NS2783_2010:0.154323,(YGSIV1598_SW_HK_NS2733_2012:1.836884,YGSIV1165_Sw_HK_2503_2011:0.836884,YGSIV1166_Sw_HK_NS2439_2011:0.836884):0.317439):0.298982,(YGSIV1315_SW_GD_3767_2011:0.593886,YGSIV1586_SW_GX_NS2394_2012:1.593886,YGSIV1416_SW_HK_NS2810_2011:0.593886,YGSIV1597_SW_HK_NS2698_2012:1.593886,(YGSIV1447_SW_HK_3700_2011:0.203523,YGSIV1501_SW_HK_168_2012:1.203523,YGSIV1338_SW_GD_1599_2012:1.203523):0.390362,YGSIV1507_SW_HK_459_2012:1.593886,((YGSIV1527_SW_HK_NS1651_2012:1.003371,YGSIV1574_Sw_GD_2919_2012:1.003371):0.436962,(YGSIV1603_SW_HK_3280_2012:1.266063,(YGSIV1407_SW_GX_NS1409_2012:0.784178,(YGSIV1562_Sw_GD_NS2701_2012:0.548633,YGSIV1569_Sw_GD_NS2892_2012:0.548633):0.235545):0.481885,YGSIV1405_SW_GX_650_2012:1.266063,(YGSIV1347_SW_GX_2242_2011:0.000000,YGSIV1404_SW_GX_508_2012:1.000000):0.266063):0.174270):0.153553,YGSIV1441_SW_HK_3238_2011:0.593886,YGSIV1526_SW_HK_1284_2012:3.593886):0.859419):0.692327):1.138032):3.770900):0.286376):1.096793):0.477619):3.507265):0.304673):0.324211):0.591390):0.501540):1.250164):1.046608):2.863279)root; [Printing tree 1] [RATO DESCRIPTION of tree PAUP_2] tree PAUP_2 = (CY011888_A_New_York_716_1994_H3N2_1994:0.003587,(EU856894_A_Hong_Kong_CUHK20217_1997_H3N2_1997:0.003587,(EU856893_A_Hong_Kong_CUHK20213_1997_H3N2_1997:0.003587,(EU856882_A_Hong_Kong_CUHK18230_1998_H3N2_1998:0.003587,(DQ487341_A_Moscow_10_1999_H3N2_1999:0.003587,(EU856852_A_Hong_Kong_CUHK13033_2001_H3N2_2001:0.003587,(EU856865_A_Hong_Kong_CUHK13658_2001_H3N2_2001:0.003587,(EU856971_A_Hong_Kong_CUHK31490_1999_H3N2_1999:0.003587,(EU856862_A_Hong_Kong_CUHK13483_2003_H3N2_2003:0.003587,(EU856984_A_Hong_Kong_CUHK33851_2004_H3N2_2004:0.003587,((CY038743_A_Hong_Kong_HKU71_2005_H3N2_2005:0.003587,(EU857080_A_Hong_Kong_CUHK69904_2006_H3N2_2006:0.003587,(EU199359_A_Pennsylvania_05_2007_H3N2_2007:0.003587,((EU716426_A_Uruguay_716_2007_H3N2_2007:0.003587,EU199366_A_Brisbane_10_2007_H3N2_2007:0.003587):0.003587,(FJ532080_A_California_09_2008_H3N2_2008:0.003587,(FJ966245_A_Victoria_502_2009_H3N2_2009:0.003587,((A_Kenya_078_2010_H3N2_2010:0.003587,((((A_Nicaragua_5754_07_2013_H3N2_2013:0.003587,(A_Czech_Republic_1_2014_H3N2_2014:0.003587,A_Hokkaido_M1_2014_H3N2_2014:0.003587):0.003587):0.003587,(A_Ontario_41_2014_H3N2_2014:0.003587,A_Delhi_1191_2013_H3N2_2013:0.003587):0.003587):0.003587,A_Singapore_H2012_779_2012_H3N2_2012:0.003587,A_Arizona_M18_2012_H3N2_2012:0.003587):0.003587,(A_Uttarakhand_8853_2011_H3N2_2011:0.003587,A_Moscow_RII05_2012_H3N2_2012:0.003587):0.003587):0.003587):0.003587,(A_Tennessee_F2084c83_2011_H3N2_2011:0.003587,A_New_York_3135_2009_H3N2_2009:0.003587,(A_Thailand_CU_H1071_2009_H3N2_2009:0.003587,(A_Singapore_KK581_2011_H3N2_2011:0.003587,A_Belgrade_WRAIR2379N_2010_H3N2_2010:0.003587):0.003587):0.003587):0.003587):0.003587):0.003587):0.003587):0.003587):0.003587):0.003587):0.003587,(EU857082_A_Hong_Kong_CUHK7047_2005_H3N2_2005:0.003587,((YGSIV1044_Sw_Binh_Duong_03_08_2010:0.003587,YGSIV1046_Sw_Binh_Duong_03_10_2010:0.003587):0.003587,((YGSIV1427_SW_HK_2857_2011:0.003587,(YGSIV1522_SW_HK_1071_2012:0.003587,YGSIV1534_SW_HK_2454_2012:0.003587):0.003587):0.003587,((YGSIV1352_SW_GX_2803_2011:0.003587,(YGSIV1369_SW_GX_NS3106_2011:0.003587,YGSIV1370_SW_GX_NS3108_2011:0.003587):0.003587):0.003587,(YGSIV1052_Sw_GX_NS2783_2010:0.003587,(YGSIV1598_SW_HK_NS2733_2012:0.003587,YGSIV1165_Sw_HK_2503_2011:0.003587,YGSIV1166_Sw_HK_NS2439_2011:0.003587):0.003587):0.003587,(YGSIV1315_SW_GD_3767_2011:0.003587,YGSIV1586_SW_GX_NS2394_2012:0.003587,YGSIV1416_SW_HK_NS2810_2011:0.003587,YGSIV1597_SW_HK_NS2698_2012:0.003587,(YGSIV1447_SW_HK_3700_2011:0.003587,YGSIV1501_SW_HK_168_2012:0.003587,YGSIV1338_SW_GD_1599_2012:0.003587):0.003587,YGSIV1507_SW_HK_459_2012:0.003587,((YGSIV1527_SW_HK_NS1651_2012:0.003587,YGSIV1574_Sw_GD_2919_2012:0.003587):0.003587,(YGSIV1603_SW_HK_3280_2012:0.003587,(YGSIV1407_SW_GX_NS1409_2012:0.003587,(YGSIV1562_Sw_GD_NS2701_2012:0.003587,YGSIV1569_Sw_GD_NS2892_2012:0.003587):0.003587):0.003587,YGSIV1405_SW_GX_650_2012:0.003587,(YGSIV1347_SW_GX_2242_2011:0.003587,YGSIV1404_SW_GX_508_2012:0.003587):0.003587):0.003587):0.003587,YGSIV1441_SW_HK_3238_2011:0.003587,YGSIV1526_SW_HK_1284_2012:0.003587):0.003587):0.003587):0.003587):0.003587):0.003587):0.003587):0.003587):0.003587):0.003587):0.003587):0.003587):0.003587):0.003587):0.003587):0.003587)root; [Printing tree 1] [PHYLO DESCRIPTION of tree PAUP_2] tree PAUP_2 = (CY011888_A_New_York_716_1994_H3N2_1994:16.000000,(EU856894_A_Hong_Kong_CUHK20217_1997_H3N2_1997:9.000000,(EU856893_A_Hong_Kong_CUHK20213_1997_H3N2_1997:8.000000,(EU856882_A_Hong_Kong_CUHK18230_1998_H3N2_1998:7.000000,(DQ487341_A_Moscow_10_1999_H3N2_1999:12.000000,(EU856852_A_Hong_Kong_CUHK13033_2001_H3N2_2001:11.000000,(EU856865_A_Hong_Kong_CUHK13658_2001_H3N2_2001:15.000000,(EU856971_A_Hong_Kong_CUHK31490_1999_H3N2_1999:3.000000,(EU856862_A_Hong_Kong_CUHK13483_2003_H3N2_2003:6.000000,(EU856984_A_Hong_Kong_CUHK33851_2004_H3N2_2004:9.000000,((CY038743_A_Hong_Kong_HKU71_2005_H3N2_2005:1.000000,(EU857080_A_Hong_Kong_CUHK69904_2006_H3N2_2006:8.000000,(EU199359_A_Pennsylvania_05_2007_H3N2_2007:10.000000,((EU716426_A_Uruguay_716_2007_H3N2_2007:4.000000,EU199366_A_Brisbane_10_2007_H3N2_2007:3.000000):1.000000,(FJ532080_A_California_09_2008_H3N2_2008:10.000000,(FJ966245_A_Victoria_502_2009_H3N2_2009:2.000000,((A_Kenya_078_2010_H3N2_2010:12.000000,((((A_Nicaragua_5754_07_2013_H3N2_2013:7.000000,(A_Czech_Republic_1_2014_H3N2_2014:4.000000,A_Hokkaido_M1_2014_H3N2_2014:7.000000):2.000000):3.000000,(A_Ontario_41_2014_H3N2_2014:17.000000,A_Delhi_1191_2013_H3N2_2013:15.000000):2.000000):2.000000,A_Singapore_H2012_779_2012_H3N2_2012:6.000000,A_Arizona_M18_2012_H3N2_2012:8.000000):5.000000,(A_Uttarakhand_8853_2011_H3N2_2011:7.000000,A_Moscow_RII05_2012_H3N2_2012:5.000000):1.000000):8.000000):8.000000,(A_Tennessee_F2084c83_2011_H3N2_2011:11.000000,A_New_York_3135_2009_H3N2_2009:7.000000,(A_Thailand_CU_H1071_2009_H3N2_2009:4.000000,(A_Singapore_KK581_2011_H3N2_2011:7.000000,A_Belgrade_WRAIR2379N_2010_H3N2_2010:4.000000):5.000000):3.000000):3.000000):3.000000):5.000000):1.000000):9.000000):4.000000):1.000000):8.000000,(EU857082_A_Hong_Kong_CUHK7047_2005_H3N2_2005:4.000000,((YGSIV1044_Sw_Binh_Duong_03_08_2010:2.000000,YGSIV1046_Sw_Binh_Duong_03_10_2010:0.000000):14.000000,((YGSIV1427_SW_HK_2857_2011:2.000000,(YGSIV1522_SW_HK_1071_2012:10.000000,YGSIV1534_SW_HK_2454_2012:6.000000):1.000000):14.000000,((YGSIV1352_SW_GX_2803_2011:0.000000,(YGSIV1369_SW_GX_NS3106_2011:3.000000,YGSIV1370_SW_GX_NS3108_2011:1.000000):3.000000):3.000000,(YGSIV1052_Sw_GX_NS2783_2010:1.000000,(YGSIV1598_SW_HK_NS2733_2012:12.000000,YGSIV1165_Sw_HK_2503_2011:4.000000,YGSIV1166_Sw_HK_NS2439_2011:6.000000):2.000000):2.000000,(YGSIV1315_SW_GD_3767_2011:8.000000,YGSIV1586_SW_GX_NS2394_2012:6.000000,YGSIV1416_SW_HK_NS2810_2011:5.000000,YGSIV1597_SW_HK_NS2698_2012:13.000000,(YGSIV1447_SW_HK_3700_2011:2.000000,YGSIV1501_SW_HK_168_2012:2.000000,YGSIV1338_SW_GD_1599_2012:7.000000):2.000000,YGSIV1507_SW_HK_459_2012:8.000000,((YGSIV1527_SW_HK_NS1651_2012:10.000000,YGSIV1574_Sw_GD_2919_2012:3.000000):3.000000,(YGSIV1603_SW_HK_3280_2012:7.000000,(YGSIV1407_SW_GX_NS1409_2012:3.000000,(YGSIV1562_Sw_GD_NS2701_2012:4.000000,YGSIV1569_Sw_GD_NS2892_2012:4.000000):2.000000):3.000000,YGSIV1405_SW_GX_650_2012:6.000000,(YGSIV1347_SW_GX_2242_2011:0.000000,YGSIV1404_SW_GX_508_2012:3.000000):2.000000):1.000000):1.000000,YGSIV1441_SW_HK_3238_2011:4.000000,YGSIV1526_SW_HK_1284_2012:3.000000):8.000000):5.000000):10.000000):35.000000):2.000000):9.000000):4.000000):31.000000):3.000000):3.000000):4.000000):4.000000):10.000000):8.000000):15.000000)root; [Printing tree 1] [NODE INFORMATION of tree PAUP_2] node 1 (root) age=22.30 len=1.7e+38 node 2 (CY011888_A_New_York_716_1994_H3N2_1994) age= 20 | anc 1 (root) age= 22 | dur= 2.3 len= 16 rate= 6.09 nodeReal= 0 age bounds=[20..20] node 3 () age= 19 | anc 1 (root) age= 22 | dur= 2.9 len= 15 rate= 6.09 nodeReal= 0 age bounds=[1e+20..17] node 4 (EU856894_A_Hong_Kong_CUHK20217_1997_H3N2_1997) age= 17 | anc 3 () age= 19 | dur= 2.4 len= 9 rate= 6.09 nodeReal= 0 age bounds=[17..17] node 5 () age= 18 | anc 3 () age= 19 | dur= 1 len= 8 rate= 6.09 nodeReal= 0 age bounds=[1e+20..17] node 6 (EU856893_A_Hong_Kong_CUHK20213_1997_H3N2_1997) age= 17 | anc 5 () age= 18 | dur= 1.4 len= 8 rate= 6.09 nodeReal= 0 age bounds=[17..17] node 7 () age= 17 | anc 5 () age= 18 | dur= 1.3 len= 10 rate= 6.09 nodeReal= 0 age bounds=[1e+20..16] node 8 (EU856882_A_Hong_Kong_CUHK18230_1998_H3N2_1998) age= 16 | anc 7 () age= 17 | dur= 1.1 len= 7 rate= 6.09 nodeReal= 0 age bounds=[16..16] node 9 () age= 17 | anc 7 () age= 17 | dur= 0.5 len= 4 rate= 6.09 nodeReal= 0 age bounds=[1e+20..15] node 10 (DQ487341_A_Moscow_10_1999_H3N2_1999) age= 15 | anc 9 () age= 17 | dur= 1.6 len= 12 rate= 6.09 nodeReal= 0 age bounds=[15..15] node 11 () age= 16 | anc 9 () age= 17 | dur=0.59 len= 4 rate= 6.09 nodeReal= 0 age bounds=[1e+20..15] node 12 (EU856852_A_Hong_Kong_CUHK13033_2001_H3N2_2001) age= 13 | anc 11 () age= 16 | dur= 3.1 len= 11 rate= 6.09 nodeReal= 0 age bounds=[13..13] node 13 () age= 16 | anc 11 () age= 16 | dur=0.32 len= 3 rate= 6.09 nodeReal= 0 age bounds=[1e+20..15] node 14 (EU856865_A_Hong_Kong_CUHK13658_2001_H3N2_2001) age= 13 | anc 13 () age= 16 | dur= 2.7 len= 15 rate= 6.09 nodeReal= 0 age bounds=[13..13] node 15 () age= 15 | anc 13 () age= 16 | dur= 0.3 len= 3 rate= 6.09 nodeReal= 0 age bounds=[1e+20..15] node 16 (EU856971_A_Hong_Kong_CUHK31490_1999_H3N2_1999) age= 15 | anc 15 () age= 15 | dur=0.42 len= 3 rate= 6.09 nodeReal= 0 age bounds=[15..15] node 17 () age= 12 | anc 15 () age= 15 | dur= 3.5 len= 31 rate= 6.09 nodeReal= 0 age bounds=[1e+20..11] node 18 (EU856862_A_Hong_Kong_CUHK13483_2003_H3N2_2003) age= 11 | anc 17 () age= 12 | dur=0.92 len= 6 rate= 6.09 nodeReal= 0 age bounds=[11..11] node 19 () age= 11 | anc 17 () age= 12 | dur=0.48 len= 4 rate= 6.09 nodeReal= 0 age bounds=[1e+20..10] node 20 (EU856984_A_Hong_Kong_CUHK33851_2004_H3N2_2004) age= 10 | anc 19 () age= 11 | dur= 1.4 len= 9 rate= 6.09 nodeReal= 0 age bounds=[10..10] node 21 () age= 10 | anc 19 () age= 11 | dur= 1.1 len= 9 rate= 6.09 nodeReal= 0 age bounds=[1e+20..9] node 22 () age= 9.2 | anc 21 () age= 10 | dur= 1.1 len= 8 rate= 6.09 nodeReal= 0 age bounds=[1e+20..9] node 23 (CY038743_A_Hong_Kong_HKU71_2005_H3N2_2005) age= 9 | anc 22 () age= 9.2 | dur=0.25 len= 1 rate= 6.09 nodeReal= 0 age bounds=[9..9] node 24 () age= 9.1 | anc 22 () age= 9.2 | dur=0.11 len= 1 rate= 6.09 nodeReal= 0 age bounds=[1e+20..8] node 25 (EU857080_A_Hong_Kong_CUHK69904_2006_H3N2_2006) age= 8 | anc 24 () age= 9.1 | dur= 1.1 len= 8 rate= 6.09 nodeReal= 0 age bounds=[8..8] node 26 () age= 8.7 | anc 24 () age= 9.1 | dur=0.47 len= 4 rate= 6.09 nodeReal= 0 age bounds=[1e+20..7] node 27 (EU199359_A_Pennsylvania_05_2007_H3N2_2007) age= 7 | anc 26 () age= 8.7 | dur= 1.7 len= 10 rate= 6.09 nodeReal= 0 age bounds=[7..7] node 28 () age= 7.6 | anc 26 () age= 8.7 | dur= 1.1 len= 9 rate= 6.09 nodeReal= 0 age bounds=[1e+20..7] node 29 () age= 7.5 | anc 28 () age= 7.6 | dur=0.12 len= 1 rate= 6.09 nodeReal= 0 age bounds=[1e+20..7] node 30 (EU716426_A_Uruguay_716_2007_H3N2_2007) age= 7 | anc 29 () age= 7.5 | dur=0.49 len= 4 rate= 6.09 nodeReal= 0 age bounds=[7..7] node 31 (EU199366_A_Brisbane_10_2007_H3N2_2007) age= 7 | anc 29 () age= 7.5 | dur=0.49 len= 3 rate= 6.09 nodeReal= 0 age bounds=[7..7] node 32 () age= 7.4 | anc 28 () age= 7.6 | dur=0.16 len= 1 rate= 6.09 nodeReal= 0 age bounds=[1e+20..6] node 33 (FJ532080_A_California_09_2008_H3N2_2008) age= 6 | anc 32 () age= 7.4 | dur= 1.4 len= 10 rate= 6.09 nodeReal= 0 age bounds=[6..6] node 34 () age= 6.5 | anc 32 () age= 7.4 | dur=0.91 len= 5 rate= 6.09 nodeReal= 0 age bounds=[1e+20..5] node 35 (FJ966245_A_Victoria_502_2009_H3N2_2009) age= 5 | anc 34 () age= 6.5 | dur= 1.5 len= 2 rate= 6.09 nodeReal= 0 age bounds=[5..5] node 36 () age= 6.3 | anc 34 () age= 6.5 | dur=0.29 len= 3 rate= 6.09 nodeReal= 0 age bounds=[1e+20..5] node 37 () age= 5.3 | anc 36 () age= 6.3 | dur=0.91 len= 8 rate= 6.09 nodeReal= 0 age bounds=[1e+20..4] node 38 (A_Kenya_078_2010_H3N2_2010) age= 4 | anc 37 () age= 5.3 | dur= 1.3 len= 12 rate= 6.09 nodeReal= 0 age bounds=[4..4] node 39 () age= 4 | anc 37 () age= 5.3 | dur= 1.4 len= 8 rate= 6.09 nodeReal= 0 age bounds=[1e+20..3] node 40 () age= 3.2 | anc 39 () age= 4 | dur=0.79 len= 5 rate= 6.09 nodeReal= 0 age bounds=[1e+20..2] node 41 () age= 2.9 | anc 40 () age= 3.2 | dur= 0.3 len= 2 rate= 6.09 nodeReal= 0 age bounds=[1e+20..1] node 42 () age= 2 | anc 41 () age= 2.9 | dur=0.87 len= 3 rate= 6.09 nodeReal= 0 age bounds=[1e+20..1] node 43 (A_Nicaragua_5754_07_2013_H3N2_2013) age= 1 | anc 42 () age= 2 | dur= 1 len= 7 rate= 6.09 nodeReal= 0 age bounds=[1..1] node 44 () age= 1.3 | anc 42 () age= 2 | dur=0.76 len= 2 rate= 6.09 nodeReal= 0 age bounds=[1e+20..0] node 45 (A_Czech_Republic_1_2014_H3N2_2014) age= 0 | anc 44 () age= 1.3 | dur= 1.3 len= 4 rate= 6.09 nodeReal= 0 age bounds=[0..0] node 46 (A_Hokkaido_M1_2014_H3N2_2014) age= 0 | anc 44 () age= 1.3 | dur= 1.3 len= 7 rate= 6.09 nodeReal= 0 age bounds=[0..0] node 47 () age= 2.7 | anc 41 () age= 2.9 | dur=0.22 len= 2 rate= 6.09 nodeReal= 0 age bounds=[1e+20..1] node 48 (A_Ontario_41_2014_H3N2_2014) age= 0 | anc 47 () age= 2.7 | dur= 2.7 len= 17 rate= 6.09 nodeReal= 0 age bounds=[0..0] node 49 (A_Delhi_1191_2013_H3N2_2013) age= 1 | anc 47 () age= 2.7 | dur= 1.7 len= 15 rate= 6.09 nodeReal= 0 age bounds=[1..1] node 51 (A_Singapore_H2012_779_2012_H3N2_2012) age= 2 | anc 40 () age= 3.2 | dur= 1.2 len= 6 rate= 6.09 nodeReal= 0 age bounds=[2..2] node 52 (A_Arizona_M18_2012_H3N2_2012) age= 2 | anc 40 () age= 3.2 | dur= 1.2 len= 8 rate= 6.09 nodeReal= 0 age bounds=[2..2] node 53 () age= 3.8 | anc 39 () age= 4 | dur=0.18 len= 1 rate= 6.09 nodeReal= 0 age bounds=[1e+20..3] node 54 (A_Uttarakhand_8853_2011_H3N2_2011) age= 3 | anc 53 () age= 3.8 | dur=0.79 len= 7 rate= 6.09 nodeReal= 0 age bounds=[3..3] node 55 (A_Moscow_RII05_2012_H3N2_2012) age= 2 | anc 53 () age= 3.8 | dur= 1.8 len= 5 rate= 6.09 nodeReal= 0 age bounds=[2..2] node 56 () age= 5.9 | anc 36 () age= 6.3 | dur=0.39 len= 3 rate= 6.09 nodeReal= 0 age bounds=[1e+20..5] node 57 (A_Tennessee_F2084c83_2011_H3N2_2011) age= 3 | anc 56 () age= 5.9 | dur= 2.9 len= 11 rate= 6.09 nodeReal= 0 age bounds=[3..3] node 59 (A_New_York_3135_2009_H3N2_2009) age= 5 | anc 56 () age= 5.9 | dur=0.86 len= 7 rate= 6.09 nodeReal= 0 age bounds=[5..5] node 60 () age= 5.5 | anc 56 () age= 5.9 | dur=0.38 len= 3 rate= 6.09 nodeReal= 0 age bounds=[1e+20..5] node 61 (A_Thailand_CU_H1071_2009_H3N2_2009) age= 5 | anc 60 () age= 5.5 | dur=0.47 len= 4 rate= 6.09 nodeReal= 0 age bounds=[5..5] node 62 () age= 4.6 | anc 60 () age= 5.5 | dur=0.91 len= 5 rate= 6.09 nodeReal= 0 age bounds=[1e+20..4] node 63 (A_Singapore_KK581_2011_H3N2_2011) age= 3 | anc 62 () age= 4.6 | dur= 1.6 len= 7 rate= 6.09 nodeReal= 0 age bounds=[3..3] node 64 (A_Belgrade_WRAIR2379N_2010_H3N2_2010) age= 4 | anc 62 () age= 4.6 | dur=0.56 len= 4 rate= 6.09 nodeReal= 0 age bounds=[4..4] node 65 () age= 10 | anc 21 () age= 10 | dur=0.29 len= 2 rate= 6.09 nodeReal= 0 age bounds=[1e+20..9] node 66 (EU857082_A_Hong_Kong_CUHK7047_2005_H3N2_2005) age= 9 | anc 65 () age= 10 | dur= 1.1 len= 4 rate= 6.09 nodeReal= 0 age bounds=[9..9] node 67 () age= 6.3 | anc 65 () age= 10 | dur= 3.8 len= 35 rate= 6.09 nodeReal= 0 age bounds=[1e+20..4] node 68 () age= 4.2 | anc 67 () age= 6.3 | dur= 2.1 len= 14 rate= 6.09 nodeReal= 0 age bounds=[1e+20..4] node 69 (YGSIV1044_Sw_Binh_Duong_03_08_2010) age= 4 | anc 68 () age= 4.2 | dur=0.16 len= 2 rate= 6.09 nodeReal= 0 age bounds=[4..4] node 70 (YGSIV1046_Sw_Binh_Duong_03_10_2010) age= 4 | anc 68 () age= 4.2 | dur=0.16 len= 0 rate= 6.09 nodeReal= 0 age bounds=[4..4] node 71 () age= 5.1 | anc 67 () age= 6.3 | dur= 1.1 len= 10 rate= 6.09 nodeReal= 0 age bounds=[1e+20..4] node 72 () age= 3.3 | anc 71 () age= 5.1 | dur= 1.8 len= 14 rate= 6.09 nodeReal= 0 age bounds=[1e+20..3] node 73 (YGSIV1427_SW_HK_2857_2011) age= 3 | anc 72 () age= 3.3 | dur=0.32 len= 2 rate= 6.09 nodeReal= 0 age bounds=[3..3] node 74 () age= 3.2 | anc 72 () age= 3.3 | dur=0.13 len= 1 rate= 6.09 nodeReal= 0 age bounds=[1e+20..2] node 75 (YGSIV1522_SW_HK_1071_2012) age= 2 | anc 74 () age= 3.2 | dur= 1.2 len= 10 rate= 6.09 nodeReal= 0 age bounds=[2..2] node 76 (YGSIV1534_SW_HK_2454_2012) age= 2 | anc 74 () age= 3.2 | dur= 1.2 len= 6 rate= 6.09 nodeReal= 0 age bounds=[2..2] node 77 () age= 4.5 | anc 71 () age= 5.1 | dur=0.69 len= 5 rate= 6.09 nodeReal= 0 age bounds=[1e+20..4] node 79 () age= 3.6 | anc 77 () age= 4.5 | dur=0.88 len= 3 rate= 6.09 nodeReal= 0 age bounds=[1e+20..3] node 80 (YGSIV1352_SW_GX_2803_2011) age= 3 | anc 79 () age= 3.6 | dur=0.57 len= 0 rate= 6.09 nodeReal= 0 age bounds=[3..3] node 81 () age= 3.3 | anc 79 () age= 3.6 | dur=0.32 len= 3 rate= 6.09 nodeReal= 0 age bounds=[1e+20..3] node 82 (YGSIV1369_SW_GX_NS3106_2011) age= 3 | anc 81 () age= 3.3 | dur=0.26 len= 3 rate= 6.09 nodeReal= 0 age bounds=[3..3] node 83 (YGSIV1370_SW_GX_NS3108_2011) age= 3 | anc 81 () age= 3.3 | dur=0.26 len= 1 rate= 6.09 nodeReal= 0 age bounds=[3..3] node 84 () age= 4.2 | anc 77 () age= 4.5 | dur= 0.3 len= 2 rate= 6.09 nodeReal= 0 age bounds=[1e+20..4] node 85 (YGSIV1052_Sw_GX_NS2783_2010) age= 4 | anc 84 () age= 4.2 | dur=0.15 len= 1 rate= 6.09 nodeReal= 0 age bounds=[4..4] node 86 () age= 3.8 | anc 84 () age= 4.2 | dur=0.32 len= 2 rate= 6.09 nodeReal= 0 age bounds=[1e+20..3] node 87 (YGSIV1598_SW_HK_NS2733_2012) age= 2 | anc 86 () age= 3.8 | dur= 1.8 len= 12 rate= 6.09 nodeReal= 0 age bounds=[2..2] node 89 (YGSIV1165_Sw_HK_2503_2011) age= 3 | anc 86 () age= 3.8 | dur=0.84 len= 4 rate= 6.09 nodeReal= 0 age bounds=[3..3] node 90 (YGSIV1166_Sw_HK_NS2439_2011) age= 3 | anc 86 () age= 3.8 | dur=0.84 len= 6 rate= 6.09 nodeReal= 0 age bounds=[3..3] node 91 () age= 3.6 | anc 77 () age= 4.5 | dur=0.86 len= 8 rate= 6.09 nodeReal= 0 age bounds=[1e+20..3] node 92 (YGSIV1315_SW_GD_3767_2011) age= 3 | anc 91 () age= 3.6 | dur=0.59 len= 8 rate= 6.09 nodeReal= 0 age bounds=[3..3] node 94 (YGSIV1586_SW_GX_NS2394_2012) age= 2 | anc 91 () age= 3.6 | dur= 1.6 len= 6 rate= 6.09 nodeReal= 0 age bounds=[2..2] node 96 (YGSIV1416_SW_HK_NS2810_2011) age= 3 | anc 91 () age= 3.6 | dur=0.59 len= 5 rate= 6.09 nodeReal= 0 age bounds=[3..3] node 100 (YGSIV1597_SW_HK_NS2698_2012) age= 2 | anc 91 () age= 3.6 | dur= 1.6 len= 13 rate= 6.09 nodeReal= 0 age bounds=[2..2] node 101 () age= 3.2 | anc 91 () age= 3.6 | dur=0.39 len= 2 rate= 6.09 nodeReal= 0 age bounds=[1e+20..3] node 102 (YGSIV1447_SW_HK_3700_2011) age= 3 | anc 101 () age= 3.2 | dur= 0.2 len= 2 rate= 6.09 nodeReal= 0 age bounds=[3..3] node 104 (YGSIV1501_SW_HK_168_2012) age= 2 | anc 101 () age= 3.2 | dur= 1.2 len= 2 rate= 6.09 nodeReal= 0 age bounds=[2..2] node 105 (YGSIV1338_SW_GD_1599_2012) age= 2 | anc 101 () age= 3.2 | dur= 1.2 len= 7 rate= 6.09 nodeReal= 0 age bounds=[2..2] node 107 (YGSIV1507_SW_HK_459_2012) age= 2 | anc 91 () age= 3.6 | dur= 1.6 len= 8 rate= 6.09 nodeReal= 0 age bounds=[2..2] node 108 () age= 3.4 | anc 91 () age= 3.6 | dur=0.15 len= 1 rate= 6.09 nodeReal= 0 age bounds=[1e+20..3] node 109 () age= 3 | anc 108 () age= 3.4 | dur=0.44 len= 3 rate= 6.09 nodeReal= 0 age bounds=[1e+20..2] node 110 (YGSIV1527_SW_HK_NS1651_2012) age= 2 | anc 109 () age= 3 | dur= 1 len= 10 rate= 6.09 nodeReal= 0 age bounds=[2..2] node 111 (YGSIV1574_Sw_GD_2919_2012) age= 2 | anc 109 () age= 3 | dur= 1 len= 3 rate= 6.09 nodeReal= 0 age bounds=[2..2] node 112 () age= 3.3 | anc 108 () age= 3.4 | dur=0.17 len= 1 rate= 6.09 nodeReal= 0 age bounds=[1e+20..3] node 113 (YGSIV1603_SW_HK_3280_2012) age= 2 | anc 112 () age= 3.3 | dur= 1.3 len= 7 rate= 6.09 nodeReal= 0 age bounds=[2..2] node 115 () age= 2.8 | anc 112 () age= 3.3 | dur=0.48 len= 3 rate= 6.09 nodeReal= 0 age bounds=[1e+20..2] node 116 (YGSIV1407_SW_GX_NS1409_2012) age= 2 | anc 115 () age= 2.8 | dur=0.78 len= 3 rate= 6.09 nodeReal= 0 age bounds=[2..2] node 117 () age= 2.5 | anc 115 () age= 2.8 | dur=0.24 len= 2 rate= 6.09 nodeReal= 0 age bounds=[1e+20..2] node 118 (YGSIV1562_Sw_GD_NS2701_2012) age= 2 | anc 117 () age= 2.5 | dur=0.55 len= 4 rate= 6.09 nodeReal= 0 age bounds=[2..2] node 119 (YGSIV1569_Sw_GD_NS2892_2012) age= 2 | anc 117 () age= 2.5 | dur=0.55 len= 4 rate= 6.09 nodeReal= 0 age bounds=[2..2] node 121 (YGSIV1405_SW_GX_650_2012) age= 2 | anc 112 () age= 3.3 | dur= 1.3 len= 6 rate= 6.09 nodeReal= 0 age bounds=[2..2] node 122 () age= 3 | anc 112 () age= 3.3 | dur=0.27 len= 2 rate= 6.09 nodeReal= 0 age bounds=[1e+20..3] node 123 (YGSIV1347_SW_GX_2242_2011) age= 3 | anc 122 () age= 3 | dur=9e-11 len= 0 rate= 6.09 nodeReal= 0 age bounds=[3..3] node 124 (YGSIV1404_SW_GX_508_2012) age= 2 | anc 122 () age= 3 | dur= 1 len= 3 rate= 6.09 nodeReal= 0 age bounds=[2..2] node 126 (YGSIV1441_SW_HK_3238_2011) age= 3 | anc 91 () age= 3.6 | dur=0.59 len= 4 rate= 6.09 nodeReal= 0 age bounds=[3..3] node 127 (YGSIV1526_SW_HK_1284_2012) age= 0 | anc 91 () age= 3.6 | dur= 3.6 len= 3 rate= 6.09 nodeReal= 0 age bounds=[0..0]