Q-value estimation for false discovery rate control

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Documentation for package ‘qvalue’ version 2.30.0

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

empPvals	Calculate p-values from a set of observed test statistics and simulated null test statistics
hedenfalk	P-values and test-statistics from the Hedenfalk et al. (2001) gene expression dataset
hist,	Histogram of p-values
hist.qvalue	Histogram of p-values
lfdr	Estimate local False Discovery Rate (FDR)
pi0est	Proportion of true null p-values
plot,	Plotting function for q-value object
plot.qvalue	Plotting function for q-value object
qvalue	Estimate the q-values for a given set of p-values
summary,	Display q-value object
summary.qvalue	Display q-value object
write.qvalue	Write results to file