FastQCFastQC Report
Thu 20 Apr 2023
SRR16771870_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR16771870_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19661720
Sequences flagged as poor quality0
Sequence length35-75
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG968990.49283073912150105No Hit
CCTGCCAGTAGTCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAGTACATACTTTTACATAGTGAAACC305650.1554543549597899No Hit
GTTCGGTCGAGCTCGGACCGCTGTCTTAACCGTCGCGTGGACTGCCTCAGCTGTGCTGCGGCTCTCGCGGTCGTT262190.13335049019109213No Hit
GTTAGTTTTACCCTACTGATGACAAGTCGTTGCAATGGTAATCCTGCTCAGTACGAGAGGAACCGCAGGTTC235430.11974028721800534No Hit
GTGAAATTCTTGGATCGCCGTAAGACGAACTACTGCGAAAGCATTTGCCAAGCATGTTTTCATTAGTCAAGAACG226790.11534596159440783No Hit
AGAAAAGTTACCACAGGGATAACTGGCTTGTGGCAGCCAAGCGTTCATAGCGACGTTGCTTTTTGATCCTTCGAT202070.10277330772689265No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)