FastQCFastQC Report
Thu 20 Apr 2023
SRR13013756.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR13013756.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8047341
Sequences flagged as poor quality0
Sequence length35-151
%GC39

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN289600.35987042179522405No Hit
GTCCTTTCGTACAAAATTAGCTCATTTCAAAAAGAGGATAGAAACTGAAC131290.16314705689742737No Hit
CTTTCGTACAAAATTAGCTCATTTCAAAAAGAGGATAGAAACTGAACTAG118310.14701750553381546No Hit
GCTCATTTCAAAAAGAGGATAGAAACTGAACTAGCTCACGCCGTTCTGAA108020.1342306732124313No Hit
GCCGTTCTGAACTCAGCTCATGTTAGATTTTAAAGGGCGAACAGACCCAC107350.13339810006808459No Hit
CTCCCATCAAAATCGTATAAGAGCCTGAAAGCTCCAATTAAGATAAAGCT104150.1294216313189661No Hit
CTCATTTCAAAAAGAGGATAGAAACTGAACTAGCTCACGCCGTTCTGAAC88640.11014818435058238No Hit
CCAACATCGAGGTCGCAATCTTCCCCTCCAATACCATCTTTCGGGAGAAA84570.1050906131602973No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)