Sample	SE mapped uniquely	SE multimapped	SE not aligned
A1-T001F_S100_hisat	1349621.0	447432.0	694669.0
A1-T030F_S196_hisat	1322000.0	470053.0	842434.0
A10-T015F_S172_hisat	1528740.0	531952.0	853251.0
A11-T027F_S180_hisat	1390820.0	529248.0	826098.0
A12-T021G_S188_hisat	1417621.0	517666.0	1082064.0
A2-T009F_S108_hisat	1258364.0	459452.0	617061.0
A2-T039F_S204_hisat	1592589.0	593570.0	1045634.0
A3-T005G_S116_hisat	1588821.0	552782.0	1308690.0
A3-T035G_S212_hisat	1142723.0	461755.0	872650.0
A4-T002FX_S220_hisat	1225838.0	379349.0	631927.0
A4-T126F_S124_hisat	992385.0	499970.0	641062.0
A5-T010FX_S228_hisat	1239794.0	327859.0	617096.0
A5-T134F_S132_hisat	1584640.0	487073.0	926584.0
A6-T130G_S140_hisat	1332242.0	571242.0	1127926.0
A7-T046F_S148_hisat	1475597.0	433340.0	928431.0
A8-T110F_S156_hisat	1469724.0	500579.0	878100.0
A9-T055G_S164_hisat	1339298.0	535280.0	1092305.0
B1-T002F_S101_hisat	1389390.0	513154.0	741394.0
B1-T031F_S197_hisat	1394513.0	478441.0	839630.0
B10-T016F_S173_hisat	1109818.0	414566.0	709552.0
B11-T118F_S181_hisat	1143291.0	348623.0	606913.0
B12-T023G_S189_hisat	1270302.0	513621.0	1000795.0
B2-T010F_S109_hisat	1398388.0	474903.0	716301.0
B2-T040F_S205_hisat	1757003.0	553838.0	1211147.0
B3-T006G_S117_hisat	1478740.0	595379.0	1187698.0
B3-T036G_S213_hisat	1181622.0	436054.0	919353.0
B4-T003FX_S221_hisat	1440625.0	383632.0	752636.0
B4-T127F_S125_hisat	1644308.0	590198.0	955502.0
B5-T011FX_S229_hisat	1243759.0	357662.0	682551.0
B5-T135F_S133_hisat	1534384.0	584917.0	1008797.0
B6-T131G_S141_hisat	1671770.0	685999.0	1374537.0
B7-T049F_S149_hisat	1513908.0	453499.0	961246.0
B8-T111F_S157_hisat	1513276.0	529434.0	914345.0
B9-T056G_S165_hisat	1401357.0	540363.0	1128327.0
C1-T003F_S102_hisat	1197333.0	451737.0	616148.0
C1-T033F_S198_hisat	1480792.0	526831.0	937099.0
C10-T017F_S174_hisat	1131998.0	496583.0	766664.0
C11-T119F_S182_hisat	1351706.0	415782.0	730862.0
C12-T025G_S190_hisat	1127420.0	458846.0	1023210.0
C2-T011F_S110_hisat	1093172.0	353655.0	569867.0
C2-T041F_S206_hisat	1515541.0	523071.0	946334.0
C3-T007G_S118_hisat	1307209.0	395710.0	851757.0
C3-T037G_S214_hisat	1189979.0	417076.0	929469.0
C4-T004FX_S222_hisat	1702272.0	400669.0	871586.0
C4-T128F_S126_hisat	1465964.0	445976.0	842636.0
C5-T012FX_S230_hisat	1486729.0	378067.0	792597.0
C5-T136F_S134_hisat	1521956.0	513838.0	924853.0
C6-T132G_S142_hisat	1093525.0	443214.0	857639.0
C7-T051F_S150_hisat	235807.0	508946.0	197950.0
C8-T112F_S158_hisat	1349009.0	433235.0	773462.0
C9-T057G_S166_hisat	1536970.0	591363.0	1148703.0
D1-T004F_S103_hisat	1265987.0	393184.0	633452.0
D1-T034F_S199_hisat	1343878.0	478654.0	742592.0
D10-T019F_S175_hisat	1436028.0	515485.0	854363.0
D11-T014G_S183_hisat	1349886.0	574864.0	1045433.0
D12-T026G_S191_hisat	1435512.0	567573.0	1147586.0
D2-T012F_S111_hisat	1564814.0	466839.0	838281.0
D2-T029G_S207_hisat	1278617.0	595416.0	1126199.0
D3-T008G_S119_hisat	1914709.0	639485.0	1310287.0
D3-T038G_S215_hisat	1477377.0	544511.0	1181779.0
D4-T005FX_S223_hisat	1470478.0	384032.0	765856.0
D4-T129F_S127_hisat	1645431.0	533493.0	962550.0
D5-T137F_S135_hisat	1356947.0	513077.0	858770.0
D6-T133G_S143_hisat	1703152.0	642508.0	1296059.0
D7-T052F_S151_hisat	1647809.0	476947.0	1006044.0
D8-T046G_S159_hisat	1357298.0	553627.0	1105836.0
D9-T058G_S167_hisat	1637849.0	619947.0	1245915.0
E1-T005F_S104_hisat	976902.0	369201.0	521771.0
E1-T035F_S200_hisat	1280717.0	493029.0	799167.0
E10-T021F_S176_hisat	1287942.0	532242.0	882810.0
E11-T015G_S184_hisat	1365331.0	603567.0	1076197.0
E12-T027G_S192_hisat	1046798.0	487109.0	880734.0
E2-T001G_S112_hisat	1455611.0	550617.0	988968.0
E2-T030G_S208_hisat	1423105.0	520978.0	1178149.0
E3-T009G_S120_hisat	1658838.0	540909.0	1111607.0
E3-T039G_S216_hisat	1064383.0	391532.0	843817.0
E4-T006FX_S224_hisat	1419735.0	434477.0	765706.0
E4-T130F_S128_hisat	1154019.0	513943.0	693499.0
E5-T126G_S136_hisat	1288550.0	534140.0	1068127.0
E6-T134G_S144_hisat	1480176.0	632467.0	1241586.0
E7-T055F_S152_hisat	1531536.0	516286.0	948663.0
E8-T047G_S160_hisat	1471494.0	650481.0	1178668.0
E9-T110G_S168_hisat	1356844.0	540294.0	1090278.0
F1-T006F_S105_hisat	1050119.0	453617.0	522428.0
F1-T036F_S201_hisat	992059.0	406777.0	608569.0
F10-T023F_S177_hisat	1560687.0	491062.0	864124.0
F11-T016G_S185_hisat	1174114.0	508675.0	1039232.0
F12-T118G_S193_hisat	1112761.0	444910.0	833384.0
F2-T002G_S113_hisat	1131749.0	462424.0	778442.0
F2-T031G_S209_hisat	1067260.0	396483.0	841930.0
F3-T010G_S121_hisat	1441756.0	448350.0	969101.0
F3-T040G_S217_hisat	1359407.0	475637.0	1059474.0
F4-T007FX_S225_hisat	1143255.0	388853.0	543793.0
F4-T131F_S129_hisat	1731432.0	529796.0	987054.0
F5-T127G_S137_hisat	1105471.0	448128.0	865376.0
F6-T135G_S145_hisat	1256296.0	467103.0	996961.0
F7-T056F_S153_hisat	1247055.0	437883.0	785380.0
F8-T049G_S161_hisat	1243423.0	501988.0	1022086.0
F9-T111G_S169_hisat	816578.0	342975.0	660184.0
G1-T007F_S106_hisat	1335648.0	431312.0	682552.0
G1-T037F_S202_hisat	1188350.0	444074.0	641017.0
G10-T025F_S178_hisat	1278741.0	465274.0	867429.0
G11-T017G_S186_hisat	1222797.0	503311.0	961442.0
G12-T119G_S194_hisat	1372503.0	549252.0	1058222.0
G2-T003G_S114_hisat	1298580.0	480103.0	929495.0
G2-T033G_S210_hisat	1020968.0	419350.0	905171.0
G3-T011G_S122_hisat	1457712.0	485646.0	1003871.0
G3-T041G_S218_hisat	1375238.0	518779.0	1081796.0
G4-T008FX_S226_hisat	1051274.0	324714.0	585799.0
G4-T132F_S130_hisat	1230366.0	463731.0	699517.0
G5-T128G_S138_hisat	1374225.0	504910.0	1055608.0
G6-T136G_S146_hisat	1226004.0	462502.0	959474.0
G7-T057F_S154_hisat	1760535.0	559792.0	967333.0
G8-T051G_S162_hisat	139532.0	355754.0	280694.0
G9-T112G_S170_hisat	1538020.0	610456.0	1248673.0
H1-T008F_S107_hisat	1473719.0	479709.0	818187.0
H1-T038F_S203_hisat	1261811.0	394251.0	753777.0
H10-T026F_S179_hisat	1260431.0	526009.0	763423.0
H11-T019G_S187_hisat	1306067.0	502687.0	979397.0
H12-T029F_S195_hisat	1441555.0	498603.0	736979.0
H2-T004G_S115_hisat	1199722.0	413735.0	840672.0
H2-T034G_S211_hisat	1282313.0	572365.0	1102303.0
H3-T001FX_S219_hisat	1339904.0	359629.0	667397.0
H3-T012G_S123_hisat	1285087.0	404135.0	922294.0
H4-T009FX_S227_hisat	1302320.0	413676.0	652893.0
H4-T133F_S131_hisat	1174350.0	449730.0	715217.0
H5-T129G_S139_hisat	1342930.0	569334.0	1155594.0
H6-T137G_S147_hisat	1386692.0	667083.0	1251368.0
H7-T058F_S155_hisat	1559075.0	640979.0	1041463.0
H8-T052G_S163_hisat	1187261.0	444543.0	915307.0
H9-T014F_S171_hisat	1158963.0	507396.0	681534.0