zr3534_4_R1.fastp-trim.20201202_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 37692238 lines in total Total number of methylation call strings processed: 75384476 Final Cytosine Methylation Report ================================= Total number of C's analysed: 905767036 Total methylated C's in CpG context: 12781614 Total methylated C's in CHG context: 771949 Total methylated C's in CHH context: 3313636 Total C to T conversions in CpG context: 103354653 Total C to T conversions in CHG context: 155896761 Total C to T conversions in CHH context: 629648423 C methylated in CpG context: 11.0% C methylated in CHG context: 0.5% C methylated in CHH context: 0.5%