Module	Section	Sample Name	Source
Bismark	alignment	CF01-CM02-Larvae_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/251/CF01-CM02-Larvae_1_val_1_bismark_bt2_PE_report.txt
Bismark	alignment	CF04-CM04-Zygote_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/246/CF04-CM04-Zygote_1_val_1_bismark_bt2_PE_report.txt
Bismark	alignment	CF06-CM02-Larvae_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/238/CF06-CM02-Larvae_1_val_1_bismark_bt2_PE_report.txt
Bismark	alignment	CF08-CM04-Larvae_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/234/CF08-CM04-Larvae_1_val_1_bismark_bt2_PE_report.txt
Bismark	alignment	EF04-EM05-Larvae_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/252/EF04-EM05-Larvae_1_val_1_bismark_bt2_PE_report.txt
Bismark	alignment	EF03-EM03-Zygote_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/240/EF03-EM03-Zygote_1_val_1_bismark_bt2_PE_report.txt
Bismark	alignment	CF08-CM03-Zygote_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/239/CF08-CM03-Zygote_1_val_1_bismark_bt2_PE_report.txt
Bismark	alignment	EF05-EM05-Zygote_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/235/EF05-EM05-Zygote_1_val_1_bismark_bt2_PE_report.txt
Bismark	alignment	EF08-EM04-Larvae_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/227/EF08-EM04-Larvae_1_val_1_bismark_bt2_PE_report.txt
Bismark	alignment	CF03-CM04-Larvae_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/253/CF03-CM04-Larvae_1_val_1_bismark_bt2_PE_report.txt
Bismark	alignment	CF06-CM01-Zygote_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/241/CF06-CM01-Zygote_1_val_1_bismark_bt2_PE_report.txt
Bismark	alignment	CF03-CM05-Larvae_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/228/CF03-CM05-Larvae_1_val_1_bismark_bt2_PE_report.txt
Bismark	alignment	EF07-EM01-Zygote_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/258/EF07-EM01-Zygote_1_val_1_bismark_bt2_PE_report.txt
Bismark	alignment	EF06-EM01-Larvae_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/254/EF06-EM01-Larvae_1_val_1_bismark_bt2_PE_report.txt
Bismark	alignment	CF03-CM03-Zygote_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/242/CF03-CM03-Zygote_1_val_1_bismark_bt2_PE_report.txt
Bismark	alignment	EF01-EM01-Zygote_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/230/EF01-EM01-Zygote_1_val_1_bismark_bt2_PE_report.txt
Bismark	alignment	EF02-EM02-Zygote_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/229/EF02-EM02-Zygote_1_val_1_bismark_bt2_PE_report.txt
Bismark	alignment	CF05-CM02-Larvae_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/255/CF05-CM02-Larvae_1_val_1_bismark_bt2_PE_report.txt
Bismark	alignment	EF06-EM02-Larvae_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/247/EF06-EM02-Larvae_1_val_1_bismark_bt2_PE_report.txt
Bismark	alignment	CF02-CM02-Zygote_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/243/CF02-CM02-Zygote_1_val_1_bismark_bt2_PE_report.txt
Bismark	alignment	EF06-EM06-Larvae_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/231/EF06-EM06-Larvae_1_val_1_bismark_bt2_PE_report.txt
Bismark	alignment	EF08-EM03-Larvae_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/256/EF08-EM03-Larvae_1_val_1_bismark_bt2_PE_report.txt
Bismark	alignment	EF03-EM05-Larvae_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/248/EF03-EM05-Larvae_1_val_1_bismark_bt2_PE_report.txt
Bismark	alignment	EF03-EM04-Larvae_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/244/EF03-EM04-Larvae_1_val_1_bismark_bt2_PE_report.txt
Bismark	alignment	CF08-CM05-Larvae_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/236/CF08-CM05-Larvae_1_val_1_bismark_bt2_PE_report.txt
Bismark	alignment	CF07-CM02-Zygote_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/232/CF07-CM02-Zygote_1_val_1_bismark_bt2_PE_report.txt
Bismark	alignment	EF07-EM03-Larvae_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/250/EF07-EM03-Larvae_1_val_1_bismark_bt2_PE_report.txt
Bismark	alignment	EF05-EM06-Larvae_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/257/EF05-EM06-Larvae_1_val_1_bismark_bt2_PE_report.txt
Bismark	alignment	CF05-CM05-Zygote_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/249/CF05-CM05-Zygote_1_val_1_bismark_bt2_PE_report.txt
Bismark	alignment	EF05-EM01-Larvae_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/245/EF05-EM01-Larvae_1_val_1_bismark_bt2_PE_report.txt
Bismark	alignment	EF04-EM04-Zygote_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/237/EF04-EM04-Zygote_1_val_1_bismark_bt2_PE_report.txt
Bismark	alignment	CF01-CM01-Zygote_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/233/CF01-CM01-Zygote_1_val_1_bismark_bt2_PE_report.txt
Bismark	deduplication	EF06-EM06-Larvae_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/199/EF06-EM06-Larvae_1_val_1_bismark_bt2_pe.deduplication_report.txt
Bismark	deduplication	EF03-EM03-Zygote_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/208/EF03-EM03-Zygote_1_val_1_bismark_bt2_pe.deduplication_report.txt
Bismark	deduplication	EF07-EM01-Zygote_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/226/EF07-EM01-Zygote_1_val_1_bismark_bt2_pe.deduplication_report.txt
Bismark	deduplication	EF06-EM01-Larvae_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/222/EF06-EM01-Larvae_1_val_1_bismark_bt2_pe.deduplication_report.txt
Bismark	deduplication	CF04-CM04-Zygote_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/214/CF04-CM04-Zygote_1_val_1_bismark_bt2_pe.deduplication_report.txt
Bismark	deduplication	CF03-CM03-Zygote_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/210/CF03-CM03-Zygote_1_val_1_bismark_bt2_pe.deduplication_report.txt
Bismark	deduplication	CF06-CM01-Zygote_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/209/CF06-CM01-Zygote_1_val_1_bismark_bt2_pe.deduplication_report.txt
Bismark	deduplication	CF05-CM02-Larvae_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/223/CF05-CM02-Larvae_1_val_1_bismark_bt2_pe.deduplication_report.txt
Bismark	deduplication	EF06-EM02-Larvae_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/215/EF06-EM02-Larvae_1_val_1_bismark_bt2_pe.deduplication_report.txt
Bismark	deduplication	CF02-CM02-Zygote_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/211/CF02-CM02-Zygote_1_val_1_bismark_bt2_pe.deduplication_report.txt
Bismark	deduplication	EF05-EM05-Zygote_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/203/EF05-EM05-Zygote_1_val_1_bismark_bt2_pe.deduplication_report.txt
Bismark	deduplication	EF08-EM03-Larvae_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/224/EF08-EM03-Larvae_1_val_1_bismark_bt2_pe.deduplication_report.txt
Bismark	deduplication	EF08-EM04-Larvae_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/195/EF08-EM04-Larvae_1_val_1_bismark_bt2_pe.deduplication_report.txt
Bismark	deduplication	EF03-EM05-Larvae_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/216/EF03-EM05-Larvae_1_val_1_bismark_bt2_pe.deduplication_report.txt
Bismark	deduplication	EF03-EM04-Larvae_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/212/EF03-EM04-Larvae_1_val_1_bismark_bt2_pe.deduplication_report.txt
Bismark	deduplication	CF08-CM05-Larvae_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/204/CF08-CM05-Larvae_1_val_1_bismark_bt2_pe.deduplication_report.txt
Bismark	deduplication	CF07-CM02-Zygote_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/200/CF07-CM02-Zygote_1_val_1_bismark_bt2_pe.deduplication_report.txt
Bismark	deduplication	CF03-CM05-Larvae_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/196/CF03-CM05-Larvae_1_val_1_bismark_bt2_pe.deduplication_report.txt
Bismark	deduplication	CF05-CM05-Zygote_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/217/CF05-CM05-Zygote_1_val_1_bismark_bt2_pe.deduplication_report.txt
Bismark	deduplication	EF05-EM01-Larvae_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/213/EF05-EM01-Larvae_1_val_1_bismark_bt2_pe.deduplication_report.txt
Bismark	deduplication	EF04-EM04-Zygote_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/205/EF04-EM04-Zygote_1_val_1_bismark_bt2_pe.deduplication_report.txt
Bismark	deduplication	CF01-CM01-Zygote_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/201/CF01-CM01-Zygote_1_val_1_bismark_bt2_pe.deduplication_report.txt
Bismark	deduplication	EF02-EM02-Zygote_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/197/EF02-EM02-Zygote_1_val_1_bismark_bt2_pe.deduplication_report.txt
Bismark	deduplication	EF07-EM03-Larvae_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/218/EF07-EM03-Larvae_1_val_1_bismark_bt2_pe.deduplication_report.txt
Bismark	deduplication	CF06-CM02-Larvae_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/206/CF06-CM02-Larvae_1_val_1_bismark_bt2_pe.deduplication_report.txt
Bismark	deduplication	CF08-CM04-Larvae_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/202/CF08-CM04-Larvae_1_val_1_bismark_bt2_pe.deduplication_report.txt
Bismark	deduplication	EF04-EM05-Larvae_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/220/EF04-EM05-Larvae_1_val_1_bismark_bt2_pe.deduplication_report.txt
Bismark	deduplication	EF01-EM01-Zygote_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/198/EF01-EM01-Zygote_1_val_1_bismark_bt2_pe.deduplication_report.txt
Bismark	deduplication	CF01-CM02-Larvae_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/219/CF01-CM02-Larvae_1_val_1_bismark_bt2_pe.deduplication_report.txt
Bismark	deduplication	CF08-CM03-Zygote_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/207/CF08-CM03-Zygote_1_val_1_bismark_bt2_pe.deduplication_report.txt
Bismark	deduplication	EF05-EM06-Larvae_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/225/EF05-EM06-Larvae_1_val_1_bismark_bt2_pe.deduplication_report.txt
Bismark	deduplication	CF03-CM04-Larvae_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/221/CF03-CM04-Larvae_1_val_1_bismark_bt2_pe.deduplication_report.txt
Bismark	methylation_extraction	CF03-CM03-Zygote_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/338/CF03-CM03-Zygote_1_val_1_bismark_bt2_pe.deduplicated_splitting_report.txt
Bismark	methylation_extraction	CF06-CM02-Larvae_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/334/CF06-CM02-Larvae_1_val_1_bismark_bt2_pe.deduplicated_splitting_report.txt
Bismark	methylation_extraction	EF05-EM05-Zygote_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/326/EF05-EM05-Zygote_1_val_1_bismark_bt2_pe.deduplicated_splitting_report.txt
Bismark	methylation_extraction	EF08-EM03-Larvae_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/352/EF08-EM03-Larvae_1_val_1_bismark_bt2_pe.deduplicated_splitting_report.txt
Bismark	methylation_extraction	CF04-CM04-Zygote_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/340/CF04-CM04-Zygote_1_val_1_bismark_bt2_pe.deduplicated_splitting_report.txt
Bismark	methylation_extraction	EF05-EM01-Larvae_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/339/EF05-EM01-Larvae_1_val_1_bismark_bt2_pe.deduplicated_splitting_report.txt
Bismark	methylation_extraction	EF04-EM04-Zygote_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/327/EF04-EM04-Zygote_1_val_1_bismark_bt2_pe.deduplicated_splitting_report.txt
Bismark	methylation_extraction	CF03-CM05-Larvae_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/323/CF03-CM05-Larvae_1_val_1_bismark_bt2_pe.deduplicated_splitting_report.txt
Bismark	methylation_extraction	EF05-EM06-Larvae_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/353/EF05-EM06-Larvae_1_val_1_bismark_bt2_pe.deduplicated_splitting_report.txt
Bismark	methylation_extraction	EF08-EM04-Larvae_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/341/EF08-EM04-Larvae_1_val_1_bismark_bt2_pe.deduplicated_splitting_report.txt
Bismark	methylation_extraction	CF08-CM05-Larvae_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/328/CF08-CM05-Larvae_1_val_1_bismark_bt2_pe.deduplicated_splitting_report.txt
Bismark	methylation_extraction	EF07-EM01-Zygote_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/354/EF07-EM01-Zygote_1_val_1_bismark_bt2_pe.deduplicated_splitting_report.txt
Bismark	methylation_extraction	CF03-CM04-Larvae_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/346/CF03-CM04-Larvae_1_val_1_bismark_bt2_pe.deduplicated_splitting_report.txt
Bismark	methylation_extraction	EF03-EM04-Larvae_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/342/EF03-EM04-Larvae_1_val_1_bismark_bt2_pe.deduplicated_splitting_report.txt
Bismark	methylation_extraction	CF01-CM01-Zygote_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/330/CF01-CM01-Zygote_1_val_1_bismark_bt2_pe.deduplicated_splitting_report.txt
Bismark	methylation_extraction	CF07-CM02-Zygote_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/329/CF07-CM02-Zygote_1_val_1_bismark_bt2_pe.deduplicated_splitting_report.txt
Bismark	methylation_extraction	EF07-EM03-Larvae_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/347/EF07-EM03-Larvae_1_val_1_bismark_bt2_pe.deduplicated_splitting_report.txt
Bismark	methylation_extraction	EF03-EM05-Larvae_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/343/EF03-EM05-Larvae_1_val_1_bismark_bt2_pe.deduplicated_splitting_report.txt
Bismark	methylation_extraction	CF08-CM03-Zygote_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/335/CF08-CM03-Zygote_1_val_1_bismark_bt2_pe.deduplicated_splitting_report.txt
Bismark	methylation_extraction	EF01-EM01-Zygote_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/331/EF01-EM01-Zygote_1_val_1_bismark_bt2_pe.deduplicated_splitting_report.txt
Bismark	methylation_extraction	EF04-EM05-Larvae_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/348/EF04-EM05-Larvae_1_val_1_bismark_bt2_pe.deduplicated_splitting_report.txt
Bismark	methylation_extraction	EF06-EM02-Larvae_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/344/EF06-EM02-Larvae_1_val_1_bismark_bt2_pe.deduplicated_splitting_report.txt
Bismark	methylation_extraction	CF02-CM02-Zygote_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/336/CF02-CM02-Zygote_1_val_1_bismark_bt2_pe.deduplicated_splitting_report.txt
Bismark	methylation_extraction	EF02-EM02-Zygote_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/332/EF02-EM02-Zygote_1_val_1_bismark_bt2_pe.deduplicated_splitting_report.txt
Bismark	methylation_extraction	EF06-EM06-Larvae_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/324/EF06-EM06-Larvae_1_val_1_bismark_bt2_pe.deduplicated_splitting_report.txt
Bismark	methylation_extraction	EF06-EM01-Larvae_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/350/EF06-EM01-Larvae_1_val_1_bismark_bt2_pe.deduplicated_splitting_report.txt
Bismark	methylation_extraction	CF01-CM02-Larvae_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/349/CF01-CM02-Larvae_1_val_1_bismark_bt2_pe.deduplicated_splitting_report.txt
Bismark	methylation_extraction	CF05-CM05-Zygote_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/345/CF05-CM05-Zygote_1_val_1_bismark_bt2_pe.deduplicated_splitting_report.txt
Bismark	methylation_extraction	CF06-CM01-Zygote_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/337/CF06-CM01-Zygote_1_val_1_bismark_bt2_pe.deduplicated_splitting_report.txt
Bismark	methylation_extraction	EF03-EM03-Zygote_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/333/EF03-EM03-Zygote_1_val_1_bismark_bt2_pe.deduplicated_splitting_report.txt
Bismark	methylation_extraction	CF08-CM04-Larvae_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/325/CF08-CM04-Larvae_1_val_1_bismark_bt2_pe.deduplicated_splitting_report.txt
Bismark	methylation_extraction	CF05-CM02-Larvae_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/351/CF05-CM02-Larvae_1_val_1_bismark_bt2_pe.deduplicated_splitting_report.txt
Bismark	m_bias	EF06-EM02-Larvae_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/376/EF06-EM02-Larvae_1_val_1_bismark_bt2_pe.deduplicated.M-bias.txt
Bismark	m_bias	CF02-CM02-Zygote_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/368/CF02-CM02-Zygote_1_val_1_bismark_bt2_pe.deduplicated.M-bias.txt
Bismark	m_bias	EF02-EM02-Zygote_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/364/EF02-EM02-Zygote_1_val_1_bismark_bt2_pe.deduplicated.M-bias.txt
Bismark	m_bias	CF08-CM05-Larvae_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/360/CF08-CM05-Larvae_1_val_1_bismark_bt2_pe.deduplicated.M-bias.txt
Bismark	m_bias	EF06-EM01-Larvae_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/382/EF06-EM01-Larvae_1_val_1_bismark_bt2_pe.deduplicated.M-bias.txt
Bismark	m_bias	CF05-CM05-Zygote_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/377/CF05-CM05-Zygote_1_val_1_bismark_bt2_pe.deduplicated.M-bias.txt
Bismark	m_bias	CF06-CM01-Zygote_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/369/CF06-CM01-Zygote_1_val_1_bismark_bt2_pe.deduplicated.M-bias.txt
Bismark	m_bias	EF03-EM03-Zygote_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/365/EF03-EM03-Zygote_1_val_1_bismark_bt2_pe.deduplicated.M-bias.txt
Bismark	m_bias	CF08-CM04-Larvae_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/357/CF08-CM04-Larvae_1_val_1_bismark_bt2_pe.deduplicated.M-bias.txt
Bismark	m_bias	CF05-CM02-Larvae_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/383/CF05-CM02-Larvae_1_val_1_bismark_bt2_pe.deduplicated.M-bias.txt
Bismark	m_bias	EF05-EM01-Larvae_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/371/EF05-EM01-Larvae_1_val_1_bismark_bt2_pe.deduplicated.M-bias.txt
Bismark	m_bias	CF03-CM04-Larvae_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/378/CF03-CM04-Larvae_1_val_1_bismark_bt2_pe.deduplicated.M-bias.txt
Bismark	m_bias	CF06-CM02-Larvae_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/366/CF06-CM02-Larvae_1_val_1_bismark_bt2_pe.deduplicated.M-bias.txt
Bismark	m_bias	EF05-EM05-Zygote_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/358/EF05-EM05-Zygote_1_val_1_bismark_bt2_pe.deduplicated.M-bias.txt
Bismark	m_bias	EF08-EM03-Larvae_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/384/EF08-EM03-Larvae_1_val_1_bismark_bt2_pe.deduplicated.M-bias.txt
Bismark	m_bias	EF04-EM05-Larvae_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/380/EF04-EM05-Larvae_1_val_1_bismark_bt2_pe.deduplicated.M-bias.txt
Bismark	m_bias	CF04-CM04-Zygote_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/372/CF04-CM04-Zygote_1_val_1_bismark_bt2_pe.deduplicated.M-bias.txt
Bismark	m_bias	CF08-CM03-Zygote_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/367/CF08-CM03-Zygote_1_val_1_bismark_bt2_pe.deduplicated.M-bias.txt
Bismark	m_bias	EF04-EM04-Zygote_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/359/EF04-EM04-Zygote_1_val_1_bismark_bt2_pe.deduplicated.M-bias.txt
Bismark	m_bias	CF03-CM05-Larvae_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/355/CF03-CM05-Larvae_1_val_1_bismark_bt2_pe.deduplicated.M-bias.txt
Bismark	m_bias	EF05-EM06-Larvae_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/385/EF05-EM06-Larvae_1_val_1_bismark_bt2_pe.deduplicated.M-bias.txt
Bismark	m_bias	CF01-CM02-Larvae_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/381/CF01-CM02-Larvae_1_val_1_bismark_bt2_pe.deduplicated.M-bias.txt
Bismark	m_bias	EF08-EM04-Larvae_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/373/EF08-EM04-Larvae_1_val_1_bismark_bt2_pe.deduplicated.M-bias.txt
Bismark	m_bias	CF07-CM02-Zygote_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/361/CF07-CM02-Zygote_1_val_1_bismark_bt2_pe.deduplicated.M-bias.txt
Bismark	m_bias	EF06-EM06-Larvae_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/356/EF06-EM06-Larvae_1_val_1_bismark_bt2_pe.deduplicated.M-bias.txt
Bismark	m_bias	EF07-EM01-Zygote_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/386/EF07-EM01-Zygote_1_val_1_bismark_bt2_pe.deduplicated.M-bias.txt
Bismark	m_bias	EF03-EM04-Larvae_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/374/EF03-EM04-Larvae_1_val_1_bismark_bt2_pe.deduplicated.M-bias.txt
Bismark	m_bias	CF03-CM03-Zygote_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/370/CF03-CM03-Zygote_1_val_1_bismark_bt2_pe.deduplicated.M-bias.txt
Bismark	m_bias	CF01-CM01-Zygote_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/362/CF01-CM01-Zygote_1_val_1_bismark_bt2_pe.deduplicated.M-bias.txt
Bismark	m_bias	EF07-EM03-Larvae_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/379/EF07-EM03-Larvae_1_val_1_bismark_bt2_pe.deduplicated.M-bias.txt
Bismark	m_bias	EF03-EM05-Larvae_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/375/EF03-EM05-Larvae_1_val_1_bismark_bt2_pe.deduplicated.M-bias.txt
Bismark	m_bias	EF01-EM01-Zygote_1_val_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/363/EF01-EM01-Zygote_1_val_1_bismark_bt2_pe.deduplicated.M-bias.txt
QualiMap	genome_results	EF07-EM01-Zygote	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/322/EF07-EM01-Zygote/genome_results.txt
QualiMap	genome_results	CF01-CM02-Larvae	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/314/CF01-CM02-Larvae/genome_results.txt
QualiMap	genome_results	EF03-EM04-Larvae	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/310/EF03-EM04-Larvae/genome_results.txt
QualiMap	genome_results	EF06-EM02-Larvae	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/309/EF06-EM02-Larvae/genome_results.txt
QualiMap	genome_results	CF06-CM01-Zygote	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/294/CF06-CM01-Zygote/genome_results.txt
QualiMap	genome_results	EF04-EM05-Larvae	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/315/EF04-EM05-Larvae/genome_results.txt
QualiMap	genome_results	CF05-CM05-Zygote	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/311/CF05-CM05-Zygote/genome_results.txt
QualiMap	genome_results	CF08-CM04-Larvae	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/303/CF08-CM04-Larvae/genome_results.txt
QualiMap	genome_results	CF03-CM03-Zygote	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/295/CF03-CM03-Zygote/genome_results.txt
QualiMap	genome_results	CF03-CM05-Larvae	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/291/CF03-CM05-Larvae/genome_results.txt
QualiMap	genome_results	EF06-EM01-Larvae	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/316/EF06-EM01-Larvae/genome_results.txt
QualiMap	genome_results	EF03-EM05-Larvae	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/312/EF03-EM05-Larvae/genome_results.txt
QualiMap	genome_results	CF08-CM05-Larvae	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/304/CF08-CM05-Larvae/genome_results.txt
QualiMap	genome_results	CF07-CM02-Zygote	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/300/CF07-CM02-Zygote/genome_results.txt
QualiMap	genome_results	EF06-EM06-Larvae	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/296/EF06-EM06-Larvae/genome_results.txt
QualiMap	genome_results	EF03-EM03-Zygote	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/292/EF03-EM03-Zygote/genome_results.txt
QualiMap	genome_results	EF07-EM03-Larvae	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/317/EF07-EM03-Larvae/genome_results.txt
QualiMap	genome_results	CF06-CM02-Larvae	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/305/CF06-CM02-Larvae/genome_results.txt
QualiMap	genome_results	EF05-EM05-Zygote	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/301/EF05-EM05-Zygote/genome_results.txt
QualiMap	genome_results	EF02-EM02-Zygote	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/297/EF02-EM02-Zygote/genome_results.txt
QualiMap	genome_results	EF01-EM01-Zygote	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/293/EF01-EM01-Zygote/genome_results.txt
QualiMap	genome_results	CF03-CM04-Larvae	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/318/CF03-CM04-Larvae/genome_results.txt
QualiMap	genome_results	CF02-CM02-Zygote	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/306/CF02-CM02-Zygote/genome_results.txt
QualiMap	genome_results	EF04-EM04-Zygote	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/302/EF04-EM04-Zygote/genome_results.txt
QualiMap	genome_results	EF08-EM03-Larvae	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/320/EF08-EM03-Larvae/genome_results.txt
QualiMap	genome_results	EF08-EM04-Larvae	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/298/EF08-EM04-Larvae/genome_results.txt
QualiMap	genome_results	CF05-CM02-Larvae	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/319/CF05-CM02-Larvae/genome_results.txt
QualiMap	genome_results	CF04-CM04-Zygote	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/307/CF04-CM04-Zygote/genome_results.txt
QualiMap	genome_results	EF05-EM06-Larvae	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/321/EF05-EM06-Larvae/genome_results.txt
QualiMap	genome_results	CF08-CM03-Zygote	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/313/CF08-CM03-Zygote/genome_results.txt
QualiMap	genome_results	CF01-CM01-Zygote	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/299/CF01-CM01-Zygote/genome_results.txt
QualiMap	genome_results	EF05-EM01-Larvae	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/308/EF05-EM01-Larvae/genome_results.txt
QualiMap	coverage_histogram	EF07-EM01-Zygote	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/322/EF07-EM01-Zygote/raw_data_qualimapReport/coverage_histogram.txt
QualiMap	coverage_histogram	CF01-CM02-Larvae	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/314/CF01-CM02-Larvae/raw_data_qualimapReport/coverage_histogram.txt
QualiMap	coverage_histogram	EF03-EM04-Larvae	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/310/EF03-EM04-Larvae/raw_data_qualimapReport/coverage_histogram.txt
QualiMap	coverage_histogram	EF06-EM02-Larvae	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/309/EF06-EM02-Larvae/raw_data_qualimapReport/coverage_histogram.txt
QualiMap	coverage_histogram	CF06-CM01-Zygote	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/294/CF06-CM01-Zygote/raw_data_qualimapReport/coverage_histogram.txt
QualiMap	coverage_histogram	EF04-EM05-Larvae	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/315/EF04-EM05-Larvae/raw_data_qualimapReport/coverage_histogram.txt
QualiMap	coverage_histogram	CF05-CM05-Zygote	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/311/CF05-CM05-Zygote/raw_data_qualimapReport/coverage_histogram.txt
QualiMap	coverage_histogram	CF08-CM04-Larvae	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/303/CF08-CM04-Larvae/raw_data_qualimapReport/coverage_histogram.txt
QualiMap	coverage_histogram	CF03-CM03-Zygote	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/295/CF03-CM03-Zygote/raw_data_qualimapReport/coverage_histogram.txt
QualiMap	coverage_histogram	CF03-CM05-Larvae	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/291/CF03-CM05-Larvae/raw_data_qualimapReport/coverage_histogram.txt
QualiMap	coverage_histogram	EF06-EM01-Larvae	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/316/EF06-EM01-Larvae/raw_data_qualimapReport/coverage_histogram.txt
QualiMap	coverage_histogram	EF03-EM05-Larvae	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/312/EF03-EM05-Larvae/raw_data_qualimapReport/coverage_histogram.txt
QualiMap	coverage_histogram	CF08-CM05-Larvae	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/304/CF08-CM05-Larvae/raw_data_qualimapReport/coverage_histogram.txt
QualiMap	coverage_histogram	CF07-CM02-Zygote	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/300/CF07-CM02-Zygote/raw_data_qualimapReport/coverage_histogram.txt
QualiMap	coverage_histogram	EF06-EM06-Larvae	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/296/EF06-EM06-Larvae/raw_data_qualimapReport/coverage_histogram.txt
QualiMap	coverage_histogram	EF03-EM03-Zygote	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/292/EF03-EM03-Zygote/raw_data_qualimapReport/coverage_histogram.txt
QualiMap	coverage_histogram	EF07-EM03-Larvae	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/317/EF07-EM03-Larvae/raw_data_qualimapReport/coverage_histogram.txt
QualiMap	coverage_histogram	CF06-CM02-Larvae	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/305/CF06-CM02-Larvae/raw_data_qualimapReport/coverage_histogram.txt
QualiMap	coverage_histogram	EF05-EM05-Zygote	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/301/EF05-EM05-Zygote/raw_data_qualimapReport/coverage_histogram.txt
QualiMap	coverage_histogram	EF02-EM02-Zygote	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/297/EF02-EM02-Zygote/raw_data_qualimapReport/coverage_histogram.txt
QualiMap	coverage_histogram	EF01-EM01-Zygote	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/293/EF01-EM01-Zygote/raw_data_qualimapReport/coverage_histogram.txt
QualiMap	coverage_histogram	CF03-CM04-Larvae	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/318/CF03-CM04-Larvae/raw_data_qualimapReport/coverage_histogram.txt
QualiMap	coverage_histogram	CF02-CM02-Zygote	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/306/CF02-CM02-Zygote/raw_data_qualimapReport/coverage_histogram.txt
QualiMap	coverage_histogram	EF04-EM04-Zygote	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/302/EF04-EM04-Zygote/raw_data_qualimapReport/coverage_histogram.txt
QualiMap	coverage_histogram	EF08-EM03-Larvae	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/320/EF08-EM03-Larvae/raw_data_qualimapReport/coverage_histogram.txt
QualiMap	coverage_histogram	EF08-EM04-Larvae	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/298/EF08-EM04-Larvae/raw_data_qualimapReport/coverage_histogram.txt
QualiMap	coverage_histogram	CF05-CM02-Larvae	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/319/CF05-CM02-Larvae/raw_data_qualimapReport/coverage_histogram.txt
QualiMap	coverage_histogram	CF04-CM04-Zygote	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/307/CF04-CM04-Zygote/raw_data_qualimapReport/coverage_histogram.txt
QualiMap	coverage_histogram	EF05-EM06-Larvae	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/321/EF05-EM06-Larvae/raw_data_qualimapReport/coverage_histogram.txt
QualiMap	coverage_histogram	CF08-CM03-Zygote	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/313/CF08-CM03-Zygote/raw_data_qualimapReport/coverage_histogram.txt
QualiMap	coverage_histogram	CF01-CM01-Zygote	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/299/CF01-CM01-Zygote/raw_data_qualimapReport/coverage_histogram.txt
QualiMap	coverage_histogram	EF05-EM01-Larvae	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/308/EF05-EM01-Larvae/raw_data_qualimapReport/coverage_histogram.txt
QualiMap	insert_size_histogram	EF07-EM01-Zygote	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/322/EF07-EM01-Zygote/raw_data_qualimapReport/insert_size_histogram.txt
QualiMap	insert_size_histogram	CF01-CM02-Larvae	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/314/CF01-CM02-Larvae/raw_data_qualimapReport/insert_size_histogram.txt
QualiMap	insert_size_histogram	EF03-EM04-Larvae	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/310/EF03-EM04-Larvae/raw_data_qualimapReport/insert_size_histogram.txt
QualiMap	insert_size_histogram	EF06-EM02-Larvae	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/309/EF06-EM02-Larvae/raw_data_qualimapReport/insert_size_histogram.txt
QualiMap	insert_size_histogram	CF06-CM01-Zygote	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/294/CF06-CM01-Zygote/raw_data_qualimapReport/insert_size_histogram.txt
QualiMap	insert_size_histogram	EF04-EM05-Larvae	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/315/EF04-EM05-Larvae/raw_data_qualimapReport/insert_size_histogram.txt
QualiMap	insert_size_histogram	CF05-CM05-Zygote	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/311/CF05-CM05-Zygote/raw_data_qualimapReport/insert_size_histogram.txt
QualiMap	insert_size_histogram	CF08-CM04-Larvae	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/303/CF08-CM04-Larvae/raw_data_qualimapReport/insert_size_histogram.txt
QualiMap	insert_size_histogram	CF03-CM03-Zygote	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/295/CF03-CM03-Zygote/raw_data_qualimapReport/insert_size_histogram.txt
QualiMap	insert_size_histogram	CF03-CM05-Larvae	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/291/CF03-CM05-Larvae/raw_data_qualimapReport/insert_size_histogram.txt
QualiMap	insert_size_histogram	EF06-EM01-Larvae	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/316/EF06-EM01-Larvae/raw_data_qualimapReport/insert_size_histogram.txt
QualiMap	insert_size_histogram	EF03-EM05-Larvae	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/312/EF03-EM05-Larvae/raw_data_qualimapReport/insert_size_histogram.txt
QualiMap	insert_size_histogram	CF08-CM05-Larvae	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/304/CF08-CM05-Larvae/raw_data_qualimapReport/insert_size_histogram.txt
QualiMap	insert_size_histogram	CF07-CM02-Zygote	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/300/CF07-CM02-Zygote/raw_data_qualimapReport/insert_size_histogram.txt
QualiMap	insert_size_histogram	EF06-EM06-Larvae	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/296/EF06-EM06-Larvae/raw_data_qualimapReport/insert_size_histogram.txt
QualiMap	insert_size_histogram	EF03-EM03-Zygote	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/292/EF03-EM03-Zygote/raw_data_qualimapReport/insert_size_histogram.txt
QualiMap	insert_size_histogram	EF07-EM03-Larvae	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/317/EF07-EM03-Larvae/raw_data_qualimapReport/insert_size_histogram.txt
QualiMap	insert_size_histogram	CF06-CM02-Larvae	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/305/CF06-CM02-Larvae/raw_data_qualimapReport/insert_size_histogram.txt
QualiMap	insert_size_histogram	EF05-EM05-Zygote	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/301/EF05-EM05-Zygote/raw_data_qualimapReport/insert_size_histogram.txt
QualiMap	insert_size_histogram	EF02-EM02-Zygote	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/297/EF02-EM02-Zygote/raw_data_qualimapReport/insert_size_histogram.txt
QualiMap	insert_size_histogram	EF01-EM01-Zygote	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/293/EF01-EM01-Zygote/raw_data_qualimapReport/insert_size_histogram.txt
QualiMap	insert_size_histogram	CF03-CM04-Larvae	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/318/CF03-CM04-Larvae/raw_data_qualimapReport/insert_size_histogram.txt
QualiMap	insert_size_histogram	CF02-CM02-Zygote	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/306/CF02-CM02-Zygote/raw_data_qualimapReport/insert_size_histogram.txt
QualiMap	insert_size_histogram	EF04-EM04-Zygote	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/302/EF04-EM04-Zygote/raw_data_qualimapReport/insert_size_histogram.txt
QualiMap	insert_size_histogram	EF08-EM03-Larvae	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/320/EF08-EM03-Larvae/raw_data_qualimapReport/insert_size_histogram.txt
QualiMap	insert_size_histogram	EF08-EM04-Larvae	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/298/EF08-EM04-Larvae/raw_data_qualimapReport/insert_size_histogram.txt
QualiMap	insert_size_histogram	CF05-CM02-Larvae	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/319/CF05-CM02-Larvae/raw_data_qualimapReport/insert_size_histogram.txt
QualiMap	insert_size_histogram	CF04-CM04-Zygote	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/307/CF04-CM04-Zygote/raw_data_qualimapReport/insert_size_histogram.txt
QualiMap	insert_size_histogram	EF05-EM06-Larvae	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/321/EF05-EM06-Larvae/raw_data_qualimapReport/insert_size_histogram.txt
QualiMap	insert_size_histogram	CF08-CM03-Zygote	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/313/CF08-CM03-Zygote/raw_data_qualimapReport/insert_size_histogram.txt
QualiMap	insert_size_histogram	CF01-CM01-Zygote	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/299/CF01-CM01-Zygote/raw_data_qualimapReport/insert_size_histogram.txt
QualiMap	insert_size_histogram	EF05-EM01-Larvae	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/308/EF05-EM01-Larvae/raw_data_qualimapReport/insert_size_histogram.txt
QualiMap	mapped_gc_distribution	EF07-EM01-Zygote	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/322/EF07-EM01-Zygote/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt
QualiMap	mapped_gc_distribution	CF01-CM02-Larvae	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/314/CF01-CM02-Larvae/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt
QualiMap	mapped_gc_distribution	EF03-EM04-Larvae	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/310/EF03-EM04-Larvae/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt
QualiMap	mapped_gc_distribution	EF06-EM02-Larvae	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/309/EF06-EM02-Larvae/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt
QualiMap	mapped_gc_distribution	CF06-CM01-Zygote	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/294/CF06-CM01-Zygote/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt
QualiMap	mapped_gc_distribution	EF04-EM05-Larvae	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/315/EF04-EM05-Larvae/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt
QualiMap	mapped_gc_distribution	CF05-CM05-Zygote	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/311/CF05-CM05-Zygote/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt
QualiMap	mapped_gc_distribution	CF08-CM04-Larvae	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/303/CF08-CM04-Larvae/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt
QualiMap	mapped_gc_distribution	CF03-CM03-Zygote	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/295/CF03-CM03-Zygote/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt
QualiMap	mapped_gc_distribution	CF03-CM05-Larvae	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/291/CF03-CM05-Larvae/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt
QualiMap	mapped_gc_distribution	EF06-EM01-Larvae	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/316/EF06-EM01-Larvae/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt
QualiMap	mapped_gc_distribution	EF03-EM05-Larvae	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/312/EF03-EM05-Larvae/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt
QualiMap	mapped_gc_distribution	CF08-CM05-Larvae	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/304/CF08-CM05-Larvae/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt
QualiMap	mapped_gc_distribution	CF07-CM02-Zygote	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/300/CF07-CM02-Zygote/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt
QualiMap	mapped_gc_distribution	EF06-EM06-Larvae	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/296/EF06-EM06-Larvae/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt
QualiMap	mapped_gc_distribution	EF03-EM03-Zygote	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/292/EF03-EM03-Zygote/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt
QualiMap	mapped_gc_distribution	EF07-EM03-Larvae	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/317/EF07-EM03-Larvae/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt
QualiMap	mapped_gc_distribution	CF06-CM02-Larvae	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/305/CF06-CM02-Larvae/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt
QualiMap	mapped_gc_distribution	EF05-EM05-Zygote	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/301/EF05-EM05-Zygote/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt
QualiMap	mapped_gc_distribution	EF02-EM02-Zygote	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/297/EF02-EM02-Zygote/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt
QualiMap	mapped_gc_distribution	EF01-EM01-Zygote	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/293/EF01-EM01-Zygote/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt
QualiMap	mapped_gc_distribution	CF03-CM04-Larvae	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/318/CF03-CM04-Larvae/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt
QualiMap	mapped_gc_distribution	CF02-CM02-Zygote	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/306/CF02-CM02-Zygote/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt
QualiMap	mapped_gc_distribution	EF04-EM04-Zygote	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/302/EF04-EM04-Zygote/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt
QualiMap	mapped_gc_distribution	EF08-EM03-Larvae	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/320/EF08-EM03-Larvae/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt
QualiMap	mapped_gc_distribution	EF08-EM04-Larvae	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/298/EF08-EM04-Larvae/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt
QualiMap	mapped_gc_distribution	CF05-CM02-Larvae	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/319/CF05-CM02-Larvae/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt
QualiMap	mapped_gc_distribution	CF04-CM04-Zygote	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/307/CF04-CM04-Zygote/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt
QualiMap	mapped_gc_distribution	EF05-EM06-Larvae	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/321/EF05-EM06-Larvae/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt
QualiMap	mapped_gc_distribution	CF08-CM03-Zygote	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/313/CF08-CM03-Zygote/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt
QualiMap	mapped_gc_distribution	CF01-CM01-Zygote	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/299/CF01-CM01-Zygote/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt
QualiMap	mapped_gc_distribution	EF05-EM01-Larvae	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/308/EF05-EM01-Larvae/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt
Cutadapt	all_sections	CF07-CM02-Zygote_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/157/CF07-CM02-Zygote_1.fastq.gz_trimming_report.txt
Cutadapt	all_sections	CF06-CM01-Zygote_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/149/CF06-CM01-Zygote_1.fastq.gz_trimming_report.txt
Cutadapt	all_sections	CF05-CM02-Larvae_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/145/CF05-CM02-Larvae_1.fastq.gz_trimming_report.txt
Cutadapt	all_sections	EF07-EM01-Zygote_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/187/EF07-EM01-Zygote_1.fastq.gz_trimming_report.txt
Cutadapt	all_sections	CF03-CM03-Zygote_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/137/CF03-CM03-Zygote_1.fastq.gz_trimming_report.txt
Cutadapt	all_sections	CF01-CM02-Larvae_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/133/CF01-CM02-Larvae_1.fastq.gz_trimming_report.txt
Cutadapt	all_sections	EF05-EM01-Larvae_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/175/EF05-EM01-Larvae_1.fastq.gz_trimming_report.txt
Cutadapt	all_sections	EF04-EM05-Larvae_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/171/EF04-EM05-Larvae_1.fastq.gz_trimming_report.txt
Cutadapt	all_sections	EF01-EM01-Zygote_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/163/EF01-EM01-Zygote_1.fastq.gz_trimming_report.txt
Cutadapt	all_sections	CF06-CM02-Larvae_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/151/CF06-CM02-Larvae_1.fastq.gz_trimming_report.txt
Cutadapt	all_sections	CF05-CM02-Larvae_2	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/146/CF05-CM02-Larvae_2.fastq.gz_trimming_report.txt
Cutadapt	all_sections	EF07-EM01-Zygote_2	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/188/EF07-EM01-Zygote_2.fastq.gz_trimming_report.txt
Cutadapt	all_sections	CF03-CM03-Zygote_2	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/138/CF03-CM03-Zygote_2.fastq.gz_trimming_report.txt
Cutadapt	all_sections	CF01-CM02-Larvae_2	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/134/CF01-CM02-Larvae_2.fastq.gz_trimming_report.txt
Cutadapt	all_sections	EF05-EM01-Larvae_2	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/176/EF05-EM01-Larvae_2.fastq.gz_trimming_report.txt
Cutadapt	all_sections	EF01-EM01-Zygote_2	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/164/EF01-EM01-Zygote_2.fastq.gz_trimming_report.txt
Cutadapt	all_sections	CF08-CM05-Larvae_2	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/160/CF08-CM05-Larvae_2.fastq.gz_trimming_report.txt
Cutadapt	all_sections	CF06-CM02-Larvae_2	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/152/CF06-CM02-Larvae_2.fastq.gz_trimming_report.txt
Cutadapt	all_sections	EF08-EM04-Larvae_2	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/194/EF08-EM04-Larvae_2.fastq.gz_trimming_report.txt
Cutadapt	all_sections	EF07-EM03-Larvae_2	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/190/EF07-EM03-Larvae_2.fastq.gz_trimming_report.txt
Cutadapt	all_sections	CF03-CM04-Larvae_2	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/140/CF03-CM04-Larvae_2.fastq.gz_trimming_report.txt
Cutadapt	all_sections	EF07-EM03-Larvae_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/189/EF07-EM03-Larvae_1.fastq.gz_trimming_report.txt
Cutadapt	all_sections	CF03-CM04-Larvae_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/139/CF03-CM04-Larvae_1.fastq.gz_trimming_report.txt
Cutadapt	all_sections	CF02-CM02-Zygote_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/135/CF02-CM02-Zygote_1.fastq.gz_trimming_report.txt
Cutadapt	all_sections	EF05-EM05-Zygote_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/177/EF05-EM05-Zygote_1.fastq.gz_trimming_report.txt
Cutadapt	all_sections	EF04-EM04-Zygote_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/169/EF04-EM04-Zygote_1.fastq.gz_trimming_report.txt
Cutadapt	all_sections	EF03-EM03-Zygote_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/165/EF03-EM03-Zygote_1.fastq.gz_trimming_report.txt
Cutadapt	all_sections	EF02-EM02-Zygote_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/161/EF02-EM02-Zygote_1.fastq.gz_trimming_report.txt
Cutadapt	all_sections	CF08-CM03-Zygote_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/153/CF08-CM03-Zygote_1.fastq.gz_trimming_report.txt
Cutadapt	all_sections	EF08-EM03-Larvae_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/191/EF08-EM03-Larvae_1.fastq.gz_trimming_report.txt
Cutadapt	all_sections	CF03-CM05-Larvae_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/141/CF03-CM05-Larvae_1.fastq.gz_trimming_report.txt
Cutadapt	all_sections	EF06-EM02-Larvae_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/183/EF06-EM02-Larvae_1.fastq.gz_trimming_report.txt
Cutadapt	all_sections	EF05-EM05-Zygote_2	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/178/EF05-EM05-Zygote_2.fastq.gz_trimming_report.txt
Cutadapt	all_sections	EF03-EM03-Zygote_2	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/166/EF03-EM03-Zygote_2.fastq.gz_trimming_report.txt
Cutadapt	all_sections	CF07-CM02-Zygote_2	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/158/CF07-CM02-Zygote_2.fastq.gz_trimming_report.txt
Cutadapt	all_sections	CF08-CM03-Zygote_2	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/154/CF08-CM03-Zygote_2.fastq.gz_trimming_report.txt
Cutadapt	all_sections	CF06-CM01-Zygote_2	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/150/CF06-CM01-Zygote_2.fastq.gz_trimming_report.txt
Cutadapt	all_sections	EF08-EM03-Larvae_2	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/192/EF08-EM03-Larvae_2.fastq.gz_trimming_report.txt
Cutadapt	all_sections	CF03-CM05-Larvae_2	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/142/CF03-CM05-Larvae_2.fastq.gz_trimming_report.txt
Cutadapt	all_sections	EF06-EM02-Larvae_2	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/184/EF06-EM02-Larvae_2.fastq.gz_trimming_report.txt
Cutadapt	all_sections	EF05-EM06-Larvae_2	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/180/EF05-EM06-Larvae_2.fastq.gz_trimming_report.txt
Cutadapt	all_sections	EF04-EM05-Larvae_2	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/172/EF04-EM05-Larvae_2.fastq.gz_trimming_report.txt
Cutadapt	all_sections	EF05-EM06-Larvae_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/179/EF05-EM06-Larvae_1.fastq.gz_trimming_report.txt
Cutadapt	all_sections	EF03-EM05-Larvae_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/167/EF03-EM05-Larvae_1.fastq.gz_trimming_report.txt
Cutadapt	all_sections	CF08-CM05-Larvae_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/159/CF08-CM05-Larvae_1.fastq.gz_trimming_report.txt
Cutadapt	all_sections	CF08-CM04-Larvae_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/155/CF08-CM04-Larvae_1.fastq.gz_trimming_report.txt
Cutadapt	all_sections	EF08-EM04-Larvae_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/193/EF08-EM04-Larvae_1.fastq.gz_trimming_report.txt
Cutadapt	all_sections	CF05-CM05-Zygote_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/147/CF05-CM05-Zygote_1.fastq.gz_trimming_report.txt
Cutadapt	all_sections	CF04-CM04-Zygote_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/143/CF04-CM04-Zygote_1.fastq.gz_trimming_report.txt
Cutadapt	all_sections	EF06-EM06-Larvae_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/185/EF06-EM06-Larvae_1.fastq.gz_trimming_report.txt
Cutadapt	all_sections	EF06-EM01-Larvae_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/181/EF06-EM01-Larvae_1.fastq.gz_trimming_report.txt
Cutadapt	all_sections	CF01-CM01-Zygote_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/131/CF01-CM01-Zygote_1.fastq.gz_trimming_report.txt
Cutadapt	all_sections	EF03-EM04-Larvae_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/173/EF03-EM04-Larvae_1.fastq.gz_trimming_report.txt
Cutadapt	all_sections	EF03-EM05-Larvae_2	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/168/EF03-EM05-Larvae_2.fastq.gz_trimming_report.txt
Cutadapt	all_sections	CF08-CM04-Larvae_2	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/156/CF08-CM04-Larvae_2.fastq.gz_trimming_report.txt
Cutadapt	all_sections	CF05-CM05-Zygote_2	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/148/CF05-CM05-Zygote_2.fastq.gz_trimming_report.txt
Cutadapt	all_sections	CF04-CM04-Zygote_2	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/144/CF04-CM04-Zygote_2.fastq.gz_trimming_report.txt
Cutadapt	all_sections	EF06-EM06-Larvae_2	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/186/EF06-EM06-Larvae_2.fastq.gz_trimming_report.txt
Cutadapt	all_sections	EF06-EM01-Larvae_2	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/182/EF06-EM01-Larvae_2.fastq.gz_trimming_report.txt
Cutadapt	all_sections	CF02-CM02-Zygote_2	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/136/CF02-CM02-Zygote_2.fastq.gz_trimming_report.txt
Cutadapt	all_sections	CF01-CM01-Zygote_2	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/132/CF01-CM01-Zygote_2.fastq.gz_trimming_report.txt
Cutadapt	all_sections	EF03-EM04-Larvae_2	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/174/EF03-EM04-Larvae_2.fastq.gz_trimming_report.txt
Cutadapt	all_sections	EF04-EM04-Zygote_2	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/170/EF04-EM04-Zygote_2.fastq.gz_trimming_report.txt
Cutadapt	all_sections	EF02-EM02-Zygote_2	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/162/EF02-EM02-Zygote_2.fastq.gz_trimming_report.txt
FastQC	all_sections	CF01-CM02-Larvae_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/69/CF01-CM02-Larvae_1_fastqc.zip
FastQC	all_sections	EF01-EM01-Zygote_2	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/34/EF01-EM01-Zygote_2_fastqc.zip
FastQC	all_sections	EF03-EM04-Larvae_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/37/EF03-EM04-Larvae_1_fastqc.zip
FastQC	all_sections	CF06-CM01-Zygote_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/85/CF06-CM01-Zygote_1_fastqc.zip
FastQC	all_sections	CF04-CM04-Zygote_2	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/80/CF04-CM04-Zygote_2_fastqc.zip
FastQC	all_sections	EF06-EM06-Larvae_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/119/EF06-EM06-Larvae_1_fastqc.zip
FastQC	all_sections	CF06-CM02-Larvae_2	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/88/CF06-CM02-Larvae_2_fastqc.zip
FastQC	all_sections	EF04-EM05-Larvae_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/107/EF04-EM05-Larvae_1_fastqc.zip
FastQC	all_sections	CF05-CM05-Zygote_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/83/CF05-CM05-Zygote_1_fastqc.zip
FastQC	all_sections	EF03-EM05-Larvae_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/103/EF03-EM05-Larvae_1_fastqc.zip
FastQC	all_sections	EF06-EM01-Larvae_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/53/EF06-EM01-Larvae_1_fastqc.zip
FastQC	all_sections	CF02-CM02-Zygote_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/7/CF02-CM02-Zygote_1_fastqc.zip
FastQC	all_sections	EF06-EM06-Larvae_2	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/56/EF06-EM06-Larvae_2_fastqc.zip
FastQC	all_sections	EF05-EM05-Zygote_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/51/EF05-EM05-Zygote_1_fastqc.zip
FastQC	all_sections	EF08-EM03-Larvae_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/125/EF08-EM03-Larvae_1_fastqc.zip
FastQC	all_sections	EF07-EM01-Zygote_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/121/EF07-EM01-Zygote_1_fastqc.zip
FastQC	all_sections	EF07-EM03-Larvae_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/59/EF07-EM03-Larvae_1_fastqc.zip
FastQC	all_sections	CF08-CM03-Zygote_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/27/CF08-CM03-Zygote_1_fastqc.zip
FastQC	all_sections	CF03-CM04-Larvae_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/75/CF03-CM04-Larvae_1_fastqc.zip
FastQC	all_sections	CF01-CM02-Larvae_2	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/70/CF01-CM02-Larvae_2_fastqc.zip
FastQC	all_sections	CF03-CM05-Larvae_2	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/78/CF03-CM05-Larvae_2_fastqc.zip
FastQC	all_sections	CF03-CM03-Zygote_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/73/CF03-CM03-Zygote_1_fastqc.zip
FastQC	all_sections	CF01-CM01-Zygote_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/3/CF01-CM01-Zygote_1_fastqc.zip
FastQC	all_sections	EF04-EM05-Larvae_2	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/108/EF04-EM05-Larvae_2_fastqc.zip
FastQC	all_sections	EF05-EM01-Larvae_2	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/46/EF05-EM01-Larvae_2_fastqc.zip
FastQC	all_sections	EF04-EM04-Zygote_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/41/EF04-EM04-Zygote_1_fastqc.zip
FastQC	all_sections	EF05-EM06-Larvae_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/49/EF05-EM06-Larvae_1_fastqc.zip
FastQC	all_sections	EF01-EM01-Zygote_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/97/EF01-EM01-Zygote_1_fastqc.zip
FastQC	all_sections	EF08-EM03-Larvae_2	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/126/EF08-EM03-Larvae_2_fastqc.zip
FastQC	all_sections	CF08-CM03-Zygote_2	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/92/CF08-CM03-Zygote_2_fastqc.zip
FastQC	all_sections	EF07-EM01-Zygote_2	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/122/EF07-EM01-Zygote_2_fastqc.zip
FastQC	all_sections	EF05-EM06-Larvae_2	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/114/EF05-EM06-Larvae_2_fastqc.zip
FastQC	all_sections	CF05-CM02-Larvae_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/17/CF05-CM02-Larvae_1_fastqc.zip
FastQC	all_sections	EF06-EM02-Larvae_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/65/EF06-EM02-Larvae_1_fastqc.zip
FastQC	all_sections	EF07-EM03-Larvae_2	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/60/EF07-EM03-Larvae_2_fastqc.zip
FastQC	all_sections	CF01-CM01-Zygote_2	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/68/CF01-CM01-Zygote_2_fastqc.zip
FastQC	all_sections	EF08-EM04-Larvae_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/63/EF08-EM04-Larvae_1_fastqc.zip
FastQC	all_sections	EF03-EM03-Zygote_2	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/36/EF03-EM03-Zygote_2_fastqc.zip
FastQC	all_sections	CF08-CM05-Larvae_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/31/CF08-CM05-Larvae_1_fastqc.zip
FastQC	all_sections	EF05-EM01-Larvae_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/109/EF05-EM01-Larvae_1_fastqc.zip
FastQC	all_sections	CF06-CM02-Larvae_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/87/CF06-CM02-Larvae_1_fastqc.zip
FastQC	all_sections	CF05-CM02-Larvae_2	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/82/CF05-CM02-Larvae_2_fastqc.zip
FastQC	all_sections	EF02-EM02-Zygote_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/111/EF02-EM02-Zygote_1_fastqc.zip
FastQC	all_sections	CF07-CM02-Zygote_2	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/26/CF07-CM02-Zygote_2_fastqc.zip
FastQC	all_sections	CF03-CM03-Zygote_2	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/74/CF03-CM03-Zygote_2_fastqc.zip
FastQC	all_sections	CF08-CM04-Larvae_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/29/CF08-CM04-Larvae_1_fastqc.zip
FastQC	all_sections	CF03-CM05-Larvae_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/77/CF03-CM05-Larvae_1_fastqc.zip
FastQC	all_sections	CF02-CM02-Zygote_2	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/72/CF02-CM02-Zygote_2_fastqc.zip
FastQC	all_sections	EF03-EM05-Larvae_2	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/40/EF03-EM05-Larvae_2_fastqc.zip
FastQC	all_sections	EF08-EM04-Larvae_2	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/128/EF08-EM04-Larvae_2_fastqc.zip
FastQC	all_sections	EF02-EM02-Zygote_2	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/48/EF02-EM02-Zygote_2_fastqc.zip
FastQC	all_sections	CF08-CM05-Larvae_2	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/96/CF08-CM05-Larvae_2_fastqc.zip
FastQC	all_sections	EF05-EM05-Zygote_2	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/116/EF05-EM05-Zygote_2_fastqc.zip
FastQC	all_sections	EF03-EM03-Zygote_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/99/EF03-EM03-Zygote_1_fastqc.zip
FastQC	all_sections	CF08-CM04-Larvae_2	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/94/CF08-CM04-Larvae_2_fastqc.zip
FastQC	all_sections	EF06-EM02-Larvae_2	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/130/EF06-EM02-Larvae_2_fastqc.zip
FastQC	all_sections	EF03-EM04-Larvae_2	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/38/EF03-EM04-Larvae_2_fastqc.zip
FastQC	all_sections	CF06-CM01-Zygote_2	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/86/CF06-CM01-Zygote_2_fastqc.zip
FastQC	all_sections	CF07-CM02-Zygote_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/89/CF07-CM02-Zygote_1_fastqc.zip
FastQC	all_sections	CF05-CM05-Zygote_2	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/84/CF05-CM05-Zygote_2_fastqc.zip
FastQC	all_sections	EF06-EM01-Larvae_2	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/54/EF06-EM01-Larvae_2_fastqc.zip
FastQC	all_sections	CF03-CM04-Larvae_2	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/76/CF03-CM04-Larvae_2_fastqc.zip
FastQC	all_sections	CF04-CM04-Zygote_1	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/79/CF04-CM04-Zygote_1_fastqc.zip
FastQC	all_sections	EF04-EM04-Zygote_2	/gscratch/scrubbed/srlab/nxf.d16ND2AUG7/42/EF04-EM04-Zygote_2_fastqc.zip