Sample	total_reads	mapped_reads	mapped_bases	sequenced_bases	duplication_rate	mean_insert_size	median_insert_size	mean_mapping_quality	gc_percentage	general_error_rate	homopolymer_indels	mean_coverage	percentage_aligned
CF01-CM01-Zygote	1297078	1297078	122157532	121977015	42.95	98.5008	91.0	15.677	20.03	16.31	44.85	0.1784	100.0
CF01-CM02-Larvae	17062072	17062072	1696468093	1693914502	41.79	105.2772	97.0	18.6288	24.42	19.29	45.59	2.4775	100.0
CF02-CM02-Zygote	6565986	6565986	590903534	589841617	41.11	93.0411	87.0	13.6864	18.57	14.44	44.73	0.863	100.0
CF03-CM03-Zygote	10817182	10817182	993581701	991961969	41.05	95.8901	88.0	16.3056	21.31	16.16	45.38	1.451	100.0
CF03-CM04-Larvae	12497048	12497048	1364700291	1362818250	36.87	128.5759	112.0	19.2399	23.04	19.580000000000002	47.04	1.993	100.0
CF03-CM05-Larvae	10789144	10789144	1167302003	1165252280	34.54	119.9378	109.0	15.0862	24.56	19.43	44.63	1.7047	100.0
CF04-CM04-Zygote	10799432	10799432	1067662811	1065766154	38.36	105.8671	96.0	16.975	21.65	17.080000000000002	45.95	1.5592	100.0
CF05-CM02-Larvae	19933186	19933186	2083902347	2081262041	39.87	114.4094	104.0	19.0647	23.95	19.59	46.16	3.0433	100.0
CF05-CM05-Zygote	11511062	11511062	1130526975	1128437592	38.25	104.4134	95.0	15.9603	23.45	17.98	45.09	1.651	100.0
CF06-CM01-Zygote	9010546	9010546	845722300	844274244	39.32	97.8563	91.0	13.7869	21.32	16.21	43.45	1.2351	100.0
CF06-CM02-Larvae	5873698	5873698	614149593	613125269	33.05	114.2239	104.0	13.7499	23.62	17.11	42.75	0.8969	100.0
CF07-CM02-Zygote	7484924	7484924	683673240	682653910	39.61	96.9211	87.0	17.9296	21.24	17.4	45.81	0.9984	100.0
CF08-CM03-Zygote	7039202	7039202	648585799	647427991	39.3	96.487	89.0	14.3751	18.62	14.940000000000001	45.67	0.9472	100.0
CF08-CM04-Larvae	136022	136022	14568577	14549499	29.84	129.8452	113.0	18.9348	22.64	18.94	46.58	0.0213	100.0
CF08-CM05-Larvae	97200	97200	11787919	11771445	22.44	166.1429	147.0	18.1712	20.6	18.95	47.68	0.0172	100.0
EF01-EM01-Zygote	6795976	6795976	693792290	692677420	33.61	111.6717	101.0	13.766	22.81	16.950000000000003	42.93	1.0132	100.0
EF02-EM02-Zygote	10870112	10870112	935940830	934579988	42.63	89.0007	82.0	17.3632	23.02	19.5	45.1	1.3669	100.0
EF03-EM03-Zygote	5464172	5464172	499433142	498563739	37.7	95.4312	88.0	14.0685	20.36	15.78	44.68	0.7294	100.0
EF03-EM04-Larvae	11668670	11668670	1175792149	1173508610	37.28	107.8819	99.0	15.4382	23.96	18.310000000000002	43.88	1.7171	100.0
EF03-EM05-Larvae	10362584	10362584	1099552791	1097766299	33.63	117.6916	106.0	14.8508	23.79	18.7	43.7	1.6058	100.0
EF04-EM04-Zygote	1763276	1763276	131053861	130869385	44.19	75.3873	72.0	12.4223	20.36	18.33	41.19	0.1914	100.0
EF04-EM05-Larvae	16787080	16787080	1855973614	1853447968	36.43	125.5406	112.0	18.9642	23.64	19.62	46.27	2.7105	100.0
EF05-EM01-Larvae	8495260	8495260	932576887	931183388	37.21	122.1592	111.0	16.2567	24.66	19.48	44.16	1.3619	100.0
EF05-EM05-Zygote	2056578	2056578	133973611	133815505	43.64	66.292	62.0	17.6439	19.03	18.029999999999998	45.94	0.1957	100.0
EF05-EM06-Larvae	14255328	14255328	1801547263	1798719120	27.84	165.3215	149.0	18.2568	22.96	17.849999999999998	46.16	2.631	100.0
EF06-EM01-Larvae	16759160	16759160	1851881581	1849378426	34.62	128.0221	113.0	19.543	23.06	19.28	46.41	2.7045	100.0
EF06-EM02-Larvae	11759718	11759718	1214420347	1212396453	36.93	112.2018	102.0	16.6311	24.38	19.32	44.84	1.7735	100.0
EF06-EM06-Larvae	2495062	2495062	262281545	261732789	33.29	111.8583	105.0	15.2023	20.63	16.35	44.5	0.383	100.0
EF07-EM01-Zygote	5632404	5632404	486775578	486071665	41.49	90.9028	81.0	17.5013	19.04	16.91	46.52	0.7109	100.0
EF07-EM03-Larvae	14368048	14368048	1535023560	1533021911	36.9	120.8974	107.0	19.5937	23.1	19.27	46.6	2.2418	100.0
EF08-EM03-Larvae	17803808	17803808	1810806669	1808559427	42.6	113.9201	100.0	19.8704	24.18	19.650000000000002	46.65	2.6445	100.0
EF08-EM04-Larvae	13350292	13350292	1260560196	1258647265	40.79	100.1468	91.0	17.4543	24.57	19.27	45.14	1.8409	100.0