[2024-12-05 07:52:25,601] multiqc.config                                     [INFO   ]  Loading config settings from: multiqc_config.yml
[2024-12-05 07:52:26,199] multiqc.core.version_check                         [WARNING]  MultiQC Version v1.25.2 now available!
[2024-12-05 07:52:26,200] multiqc.core.file_search                           [INFO   ]  Search path: /gscratch/scrubbed/srlab/nxf.d16ND2AUG7
[2024-12-05 07:53:05,497] multiqc.modules.bismark.bismark                    [INFO   ]  Found 32 alignment reports
[2024-12-05 07:53:05,940] multiqc.modules.bismark.bismark                    [INFO   ]  Found 32 dedup reports
[2024-12-05 07:53:05,951] multiqc.modules.bismark.bismark                    [INFO   ]  Found 32 methextract reports
[2024-12-05 07:53:06,013] multiqc.modules.custom_content.custom_content      [WARNING]  HTML plot type found with more than one dataset in nf-core-methylseq-summary
[2024-12-05 07:53:06,013] multiqc.modules.custom_content.custom_content      [INFO   ]  nf-core-methylseq-summary: Found 1 sample (html)
[2024-12-05 07:53:06,013] multiqc.modules.custom_content.custom_content      [WARNING]  HTML plot type found with more than one dataset in nf-core-methylseq-methods-description
[2024-12-05 07:53:06,013] multiqc.modules.custom_content.custom_content      [INFO   ]  nf-core-methylseq-methods-description: Found 1 sample (html)
[2024-12-05 07:53:06,119] multiqc.modules.qualimap.qualimap                  [INFO   ]  Found 32 BamQC reports
[2024-12-05 07:53:06,195] multiqc.modules.cutadapt.cutadapt                  [INFO   ]  Found 64 reports
[2024-12-05 07:53:07,150] multiqc.modules.fastqc.fastqc                      [INFO   ]  Found 64 reports
[2024-12-05 07:53:07,326] multiqc.core.write_results                         [INFO   ]  Rendering plots. Export plots to formats png, svg, pdf is requested, so it might take a while. To disable plot export, set `export_plots: false` in config, or remove the `--export-plots` command line flag