Sample	Deduplicated reads (remaining)	Duplicate reads (removed)
CF01-CM01-Zygote_1_val_1	648539.0	210346.0
CF01-CM02-Larvae_1_val_1	8531036.0	2987570.0
CF02-CM02-Zygote_1_val_1	3282993.0	2317700.0
CF03-CM03-Zygote_1_val_1	5408591.0	1994208.0
CF03-CM04-Larvae_1_val_1	6248524.0	8414507.0
CF03-CM05-Larvae_1_val_1	5394572.0	1800185.0
CF04-CM04-Zygote_1_val_1	5399716.0	2713370.0
CF05-CM02-Larvae_1_val_1	9966593.0	3896108.0
CF05-CM05-Zygote_1_val_1	5755531.0	2326615.0
CF06-CM01-Zygote_1_val_1	4505273.0	1599419.0
CF06-CM02-Larvae_1_val_1	2936849.0	1089544.0
CF07-CM02-Zygote_1_val_1	3742462.0	2139593.0
CF08-CM03-Zygote_1_val_1	3519601.0	2160282.0
CF08-CM04-Larvae_1_val_1	68011.0	53993.0
CF08-CM05-Larvae_1_val_1	48600.0	364028.0
EF01-EM01-Zygote_1_val_1	3397988.0	1224190.0
EF02-EM02-Zygote_1_val_1	5435056.0	2069445.0
EF03-EM03-Zygote_1_val_1	2732086.0	1112953.0
EF03-EM04-Larvae_1_val_1	5834335.0	2298543.0
EF03-EM05-Larvae_1_val_1	5181292.0	1676687.0
EF04-EM04-Zygote_1_val_1	881638.0	455225.0
EF04-EM05-Larvae_1_val_1	8393540.0	3505385.0
EF05-EM01-Larvae_1_val_1	4247630.0	1690383.0
EF05-EM05-Zygote_1_val_1	1028289.0	483639.0
EF05-EM06-Larvae_1_val_1	7127664.0	8704128.0
EF06-EM01-Larvae_1_val_1	8379580.0	3032216.0
EF06-EM02-Larvae_1_val_1	5879859.0	2311514.0
EF06-EM06-Larvae_1_val_1	1247531.0	5792109.0
EF07-EM01-Zygote_1_val_1	2816202.0	3460494.0
EF07-EM03-Larvae_1_val_1	7184024.0	3558846.0
EF08-EM03-Larvae_1_val_1	8901904.0	7330639.0
EF08-EM04-Larvae_1_val_1	6675146.0	2555757.0