INFO:    Environment variable SINGULARITYENV_TMPDIR is set, but APPTAINERENV_TMPDIR is preferred
INFO:    Environment variable SINGULARITYENV_NXF_TASK_WORKDIR is set, but APPTAINERENV_NXF_TASK_WORKDIR is preferred
INFO:    Environment variable SINGULARITYENV_NXF_DEBUG is set, but APPTAINERENV_NXF_DEBUG is preferred
PAIRED_END_BAM_INPUT
Processed 1000000 records
Processed 2000000 records
Processed 3000000 records
Processed 4000000 records
Processed 5000000 records
Processed 6000000 records
Processed 7000000 records
Processed 8000000 records
Processed 9000000 records
Processed 10000000 records
Processed 11000000 records
Processed 12000000 records
Processed 13000000 records
Processed 14000000 records
Processed 15000000 records
Processed 16000000 records
Processed 17000000 records
Processed 18000000 records
Processed 19000000 records
Processed 20000000 records
Processed 21000000 records
Processed 22000000 records
Processed 23000000 records
Processed 24000000 records
Processed 25000000 records
Processed 26000000 records
Processed 27000000 records
paired = 13862701
unpaired = 0
MERGED PAIRED END READS = 13862701
MATES PROCESSED = 27725402
TOTAL READS     = 13862701
DISTINCT READS  = 9.96369e+06
DISTINCT COUNTS = 71
MAX COUNT       = 390
COUNTS OF 1     = 7.15191e+06
MAX TERMS       = 38
OBSERVED COUNTS (391)
1	7151910
2	2046078
3	553674
4	149311
5	41800
6	12654
7	4141
8	1704
9	818
10	448
11	251
12	173
13	128
14	98
15	80
16	50
17	41
18	48
19	39
20	29
21	32
22	15
23	16
24	14
25	10
26	12
27	7
28	13
29	6
30	8
31	8
32	3
33	5
34	1
35	6
36	5
37	2
38	5
39	2
42	3
43	3
44	1
45	3
46	2
49	1
50	1
51	1
53	1
54	3
55	1
58	1
61	2
62	1
63	1
64	1
65	1
69	1
73	1
74	1
82	1
88	1
101	1
111	1
128	1
131	1
145	1
166	1
176	1
283	1
322	1
390	1

[ESTIMATING YIELD CURVE]
[BOOTSTRAPPING HISTOGRAM]
..__............._...._.__......_........._......_._........._.._.__.._.
...._.........._........__........__._._.__...._.._._._._.
[COMPUTING CONFIDENCE INTERVALS]
[WRITING OUTPUT]