INFO:    Environment variable SINGULARITYENV_TMPDIR is set, but APPTAINERENV_TMPDIR is preferred
INFO:    Environment variable SINGULARITYENV_NXF_TASK_WORKDIR is set, but APPTAINERENV_NXF_TASK_WORKDIR is preferred
INFO:    Environment variable SINGULARITYENV_NXF_DEBUG is set, but APPTAINERENV_NXF_DEBUG is preferred
PAIRED_END_BAM_INPUT
Processed 1000000 records
Processed 2000000 records
Processed 3000000 records
Processed 4000000 records
Processed 5000000 records
Processed 6000000 records
Processed 7000000 records
Processed 8000000 records
Processed 9000000 records
Processed 10000000 records
Processed 11000000 records
Processed 12000000 records
Processed 13000000 records
Processed 14000000 records
Processed 15000000 records
Processed 16000000 records
Processed 17000000 records
Processed 18000000 records
Processed 19000000 records
Processed 20000000 records
Processed 21000000 records
Processed 22000000 records
Processed 23000000 records
Processed 24000000 records
Processed 25000000 records
Processed 26000000 records
Processed 27000000 records
Processed 28000000 records
Processed 29000000 records
paired = 14663031
unpaired = 0
MERGED PAIRED END READS = 14663031
MATES PROCESSED = 29326062
TOTAL READS     = 14663031
DISTINCT READS  = 6.24883e+06
DISTINCT COUNTS = 104
MAX COUNT       = 507
COUNTS OF 1     = 2.86623e+06
MAX TERMS       = 58
OBSERVED COUNTS (508)
1	2866232
2	1452408
3	784722
4	446289
5	263873
6	159341
7	98467
8	62145
9	39614
10	25365
11	16556
12	10562
13	7174
14	4726
15	3132
16	2220
17	1611
18	1058
19	777
20	599
21	417
22	329
23	198
24	163
25	117
26	122
27	77
28	70
29	54
30	45
31	39
32	26
33	35
34	25
35	26
36	21
37	17
38	12
39	12
40	7
41	5
42	6
43	6
44	11
45	6
46	5
47	8
48	6
49	8
50	6
51	6
52	2
53	2
54	4
55	1
56	3
57	1
58	2
59	1
61	6
62	4
64	2
65	1
66	1
67	4
68	1
69	1
70	1
72	1
76	2
77	1
78	1
79	1
85	1
87	2
91	1
92	2
94	1
96	1
97	1
102	1
105	1
106	1
107	1
119	1
124	1
130	1
144	1
148	1
153	2
158	1
159	1
161	1
165	1
170	1
179	2
180	1
194	1
199	1
228	1
240	1
274	1
374	1
507	1

[ESTIMATING YIELD CURVE]
[BOOTSTRAPPING HISTOGRAM]
..........._............................................................
.............................
[COMPUTING CONFIDENCE INTERVALS]
[WRITING OUTPUT]