INFO:    Environment variable SINGULARITYENV_TMPDIR is set, but APPTAINERENV_TMPDIR is preferred
INFO:    Environment variable SINGULARITYENV_NXF_TASK_WORKDIR is set, but APPTAINERENV_NXF_TASK_WORKDIR is preferred
INFO:    Environment variable SINGULARITYENV_NXF_DEBUG is set, but APPTAINERENV_NXF_DEBUG is preferred
PAIRED_END_BAM_INPUT
Processed 1000000 records
Processed 2000000 records
Processed 3000000 records
Processed 4000000 records
Processed 5000000 records
Processed 6000000 records
Processed 7000000 records
Processed 8000000 records
Processed 9000000 records
Processed 10000000 records
Processed 11000000 records
paired = 5600693
unpaired = 0
MERGED PAIRED END READS = 5600693
MATES PROCESSED = 11201386
TOTAL READS     = 5600693
DISTINCT READS  = 3.28257e+06
DISTINCT COUNTS = 98
MAX COUNT       = 701
COUNTS OF 1     = 1.96248e+06
MAX TERMS       = 48
OBSERVED COUNTS (702)
1	1962484
2	771904
3	313616
4	130130
5	56217
6	25116
7	11600
8	5335
9	2631
10	1337
11	724
12	405
13	259
14	161
15	106
16	74
17	58
18	57
19	34
20	21
21	19
22	24
23	22
24	20
25	19
26	17
27	11
28	12
29	10
30	8
31	7
32	3
33	5
34	6
35	6
36	8
37	7
38	5
39	4
40	4
41	2
42	2
43	2
44	1
45	1
46	3
47	2
48	1
51	1
52	2
53	3
54	1
55	1
56	1
57	2
58	2
60	2
61	2
63	1
64	3
65	2
66	1
67	3
68	3
70	1
72	1
73	1
74	1
79	1
80	1
81	1
82	3
89	1
98	1
99	1
104	1
107	2
110	1
111	1
119	1
123	1
136	1
141	1
145	1
161	1
195	1
220	1
227	2
236	1
237	1
286	1
315	1
422	1
438	1
516	1
540	1
675	1
701	1

[ESTIMATING YIELD CURVE]
[BOOTSTRAPPING HISTOGRAM]
_..._....._._..__._.........._._.._._..........._......................_
.....................__..._....._............
[COMPUTING CONFIDENCE INTERVALS]
[WRITING OUTPUT]