FastQCFastQC Report
Fri 26 Sep 2025
SRX18040026_2.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRX18040026_2.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences40185031
Total Bases6 Gbp
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGAGAAGTTACGCCGGGGATAACAGGCCAATCCTCTAGTAAAGTTCGTAT500730.12460610021676978No Hit
ATTTGATACAGTAAATTCTCGAACTAATTTCTTTAAGGATGTGATACGCA493000.12268249836612047No Hit
ATTCAACTTTATCTAAAGGAACTCGGCAAATACTAAGCCTCGCCTGTTTA472070.11747409128538436No Hit
CGCAAAATCGGGCTTTATGATAGCTGGTTGTTCAAAAAATGCCTTTAAGT470310.1170361172547061No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)