FastQCFastQC Report
Fri 26 Sep 2025
SRX18040024_2.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRX18040024_2.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences66411518
Total Bases10 Gbp
Sequences flagged as poor quality0
Sequence length151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTGTTAAGTAGCGGTTCTTAAACTTTTAGGTGGTTGAGTATAGGAGTAT1468140.22106707453969054No Hit
GAAGTTGTTAAGTAGCGGTTCTTAAACTTTTAGGTGGTTGAGTATAGGAG1040360.15665354916296295No Hit
AGAAGTTGTTAAGTAGCGGTTCTTAAACTTTTAGGTGGTTGAGTATAGGA868780.1308176693085076No Hit
ATTTGATACAGTAAATTCTCGAACTAATTTCTTTAAGGATGTGATACGCA844880.12721889597524333No Hit
GGAGTATTAGAAAGCCCATAATCTAGCTATATTAAGTCTGACTAGACGCA795760.11982258860578975No Hit
CGCAAAATCGGGCTTTATGATAGCTGGTTGTTCAAAAAATGCTTTTAAGT748990.11278013551805878No Hit
CATTATTGAAGCTTGTTTATACAGTACCTTTAGCAGAATGGCCTTTTGAG667560.10051870821564417No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)