FastQCFastQC Report
Fri 26 Sep 2025
SRX18040010_1.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRX18040010_1.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences67483867
Total Bases10.1 Gbp
Sequences flagged as poor quality0
Sequence length151
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCCGATTTTGCGTATCACATCCTTAAAGAAATTAGTTCGAGAATTTACT1211670.17954958034636634No Hit
GGCACTATAAACCCTATTTCTCTTTCTAAAAATTGAAATATTAAAGAAAC1142880.16935603290190823No Hit
CTCGGCATTACGTCTTTAAAAATCTCTTTATTTCGGGAAAAACCATAAGG828100.12271081027410595No Hit
GCACTATAAACCCTATTTCTCTTTCTAAAAATTGAAATATTAAAGAAACT709580.10514809413633631No Hit
CCCGATTTTGCGTATCACATCCTTAAAGAAATTAGTTCGAGAATTTACTG701410.10393743440932333No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)