WARNING: you specified the options for cutting by quality, but forogt to enable any of cut_front/cut_tail/cut_right. This will have no effect.
Detecting adapter sequence for read1...
No adapter detected for read1

Read1 before filtering:
total reads: 3440122
total bases: 313025318
Q20 bases: 306180988(97.8135%)
Q30 bases: 296983686(94.8753%)

Read1 after filtering:
total reads: 2439396
total bases: 209185768
Q20 bases: 204552868(97.7853%)
Q30 bases: 198425978(94.8563%)

Filtering result:
reads passed filter: 2439396
reads failed due to low quality: 3655
reads failed due to too many N: 0
reads failed due to too short: 997071
reads with adapter trimmed: 0
bases trimmed due to adapters: 0

Duplication rate (may be overestimated since this is SE data): 23.3904%

JSON report: SRX7656992.fastp.json
HTML report: SRX7656992.fastp.html

fastp --in1 SRX7656992.fastq.gz --out1 SRX7656992.fastp.fastq.gz --thread 6 --json SRX7656992.fastp.json --html SRX7656992.fastp.html --cut_mean_quality 30 --trim_front1 10 --trim_front2 10 --adapter_fasta /mmfs1/gscratch/scrubbed/strigg/analyses/20250415_RNAseq_2/polyA.fa 
fastp v0.23.4, time used: 9 seconds