WARNING: you specified the options for cutting by quality, but forogt to enable any of cut_front/cut_tail/cut_right. This will have no effect.
Detecting adapter sequence for read1...
No adapter detected for read1

Read1 before filtering:
total reads: 3071918
total bases: 279945444
Q20 bases: 273595145(97.7316%)
Q30 bases: 265095106(94.6953%)

Read1 after filtering:
total reads: 2179950
total bases: 187130884
Q20 bases: 182816660(97.6945%)
Q30 bases: 177150037(94.6664%)

Filtering result:
reads passed filter: 2179950
reads failed due to low quality: 3510
reads failed due to too many N: 0
reads failed due to too short: 888458
reads with adapter trimmed: 0
bases trimmed due to adapters: 0

Duplication rate (may be overestimated since this is SE data): 25.6552%

JSON report: SRX7656984.fastp.json
HTML report: SRX7656984.fastp.html

fastp --in1 SRX7656984.fastq.gz --out1 SRX7656984.fastp.fastq.gz --thread 6 --json SRX7656984.fastp.json --html SRX7656984.fastp.html --cut_mean_quality 30 --trim_front1 10 --trim_front2 10 --adapter_fasta /mmfs1/gscratch/scrubbed/strigg/analyses/20250415_RNAseq_2/polyA.fa 
fastp v0.23.4, time used: 10 seconds