WARNING: you specified the options for cutting by quality, but forogt to enable any of cut_front/cut_tail/cut_right. This will have no effect.
Detecting adapter sequence for read1...
No adapter detected for read1

Read1 before filtering:
total reads: 3749065
total bases: 338820235
Q20 bases: 331442275(97.8225%)
Q30 bases: 321452722(94.8741%)

Read1 after filtering:
total reads: 2554314
total bases: 218085374
Q20 bases: 213223207(97.7705%)
Q30 bases: 206731327(94.7938%)

Filtering result:
reads passed filter: 2554314
reads failed due to low quality: 4093
reads failed due to too many N: 0
reads failed due to too short: 1190658
reads with adapter trimmed: 0
bases trimmed due to adapters: 0

Duplication rate (may be overestimated since this is SE data): 23.8955%

JSON report: SRX7656968.fastp.json
HTML report: SRX7656968.fastp.html

fastp --in1 SRX7656968.fastq.gz --out1 SRX7656968.fastp.fastq.gz --thread 6 --json SRX7656968.fastp.json --html SRX7656968.fastp.html --cut_mean_quality 30 --trim_front1 10 --trim_front2 10 --adapter_fasta /mmfs1/gscratch/scrubbed/strigg/analyses/20250415_RNAseq_2/polyA.fa 
fastp v0.23.4, time used: 9 seconds