WARNING: you specified the options for cutting by quality, but forogt to enable any of cut_front/cut_tail/cut_right. This will have no effect. Detecting adapter sequence for read1... No adapter detected for read1 Read1 before filtering: total reads: 3334863 total bases: 302671301 Q20 bases: 295780346(97.7233%) Q30 bases: 286641583(94.7039%) Read1 after filtering: total reads: 2413676 total bases: 207914417 Q20 bases: 203095645(97.6823%) Q30 bases: 196778971(94.6442%) Filtering result: reads passed filter: 2413676 reads failed due to low quality: 3778 reads failed due to too many N: 0 reads failed due to too short: 917409 reads with adapter trimmed: 0 bases trimmed due to adapters: 0 Duplication rate (may be overestimated since this is SE data): 28.1687% JSON report: SRX7656969.fastp.json HTML report: SRX7656969.fastp.html fastp --in1 SRX7656969.fastq.gz --out1 SRX7656969.fastp.fastq.gz --thread 6 --json SRX7656969.fastp.json --html SRX7656969.fastp.html --cut_mean_quality 30 --trim_front1 10 --trim_front2 10 --adapter_fasta /mmfs1/gscratch/scrubbed/strigg/analyses/20250415_RNAseq/polyA.fa fastp v0.23.4, time used: 9 seconds