WARNING: you specified the options for cutting by quality, but forogt to enable any of cut_front/cut_tail/cut_right. This will have no effect. Detecting adapter sequence for read1... No adapter detected for read1 Read1 before filtering: total reads: 3513359 total bases: 322055749 Q20 bases: 314949976(97.7936%) Q30 bases: 305420813(94.8348%) Read1 after filtering: total reads: 2574095 total bases: 220053637 Q20 bases: 215116595(97.7564%) Q30 bases: 208610689(94.7999%) Filtering result: reads passed filter: 2574095 reads failed due to low quality: 4319 reads failed due to too many N: 0 reads failed due to too short: 934945 reads with adapter trimmed: 0 bases trimmed due to adapters: 0 Duplication rate (may be overestimated since this is SE data): 24.7515% JSON report: SRX7656965.fastp.json HTML report: SRX7656965.fastp.html fastp --in1 SRX7656965.fastq.gz --out1 SRX7656965.fastp.fastq.gz --thread 6 --json SRX7656965.fastp.json --html SRX7656965.fastp.html --cut_mean_quality 30 --trim_front1 10 --trim_front2 10 --adapter_fasta /mmfs1/gscratch/scrubbed/strigg/analyses/20250415_RNAseq/polyA.fa fastp v0.23.4, time used: 10 seconds