WARNING: you specified the options for cutting by quality, but forogt to enable any of cut_front/cut_tail/cut_right. This will have no effect. Detecting adapter sequence for read1... No adapter detected for read1 Read1 before filtering: total reads: 50000 total bases: 4409081 Q20 bases: 4320919(98.0004%) Q30 bases: 4199414(95.2447%) Read1 after filtering: total reads: 29217 total bases: 2516709 Q20 bases: 2462061(97.8286%) Q30 bases: 2391316(95.0176%) Filtering result: reads passed filter: 29217 reads failed due to low quality: 42 reads failed due to too many N: 0 reads failed due to too short: 20741 reads with adapter trimmed: 0 bases trimmed due to adapters: 0 Duplication rate (may be overestimated since this is SE data): 19.34% JSON report: SRX7656975.fastp.json HTML report: SRX7656975.fastp.html fastp --in1 SRX7656975.fastq.gz --out1 SRX7656975.fastp.fastq.gz --thread 6 --json SRX7656975.fastp.json --html SRX7656975.fastp.html --cut_mean_quality 30 --trim_front1 10 --trim_front2 10 --reads_to_process 50000 --adapter_fasta /mmfs1/gscratch/scrubbed/strigg/analyses/20250407_RNAseq/adapter_fasta/polyA.fa fastp v0.23.4, time used: 2 seconds