WARNING: you specified the options for cutting by quality, but forogt to enable any of cut_front/cut_tail/cut_right. This will have no effect.
Detecting adapter sequence for read1...
No adapter detected for read1

Read1 before filtering:
total reads: 50000
total bases: 4433604
Q20 bases: 4341976(97.9333%)
Q30 bases: 4215235(95.0747%)

Read1 after filtering:
total reads: 29419
total bases: 2528708
Q20 bases: 2472539(97.7787%)
Q30 bases: 2397991(94.8307%)

Filtering result:
reads passed filter: 29419
reads failed due to low quality: 44
reads failed due to too many N: 0
reads failed due to too short: 20537
reads with adapter trimmed: 0
bases trimmed due to adapters: 0

Duplication rate (may be overestimated since this is SE data): 17.978%

JSON report: SRX7656979.fastp.json
HTML report: SRX7656979.fastp.html

fastp --in1 SRX7656979.fastq.gz --out1 SRX7656979.fastp.fastq.gz --thread 6 --json SRX7656979.fastp.json --html SRX7656979.fastp.html --cut_mean_quality 30 --trim_front1 10 --trim_front2 10 --reads_to_process 50000 --adapter_fasta /mmfs1/gscratch/scrubbed/strigg/analyses/20250407_RNAseq/adapter_fasta/3ILL-30_5ILL/polyA.fa 
fastp v0.23.4, time used: 3 seconds