Nov-08 18:03:09.329 [main] DEBUG nextflow.cli.Launcher - Setting http proxy: ProxyConfig[protocol=http; host=klone-dip1; port=3128] Nov-08 18:03:09.383 [main] DEBUG nextflow.cli.Launcher - $> nextflow run nf-core/fetchngs -resume -c /gscratch/srlab/strigg/bin/uw_hyak_srlab.config --input /gscratch/scrubbed/strigg/analyses/20241104_RNAseq/ids.csv --outdir /gscratch/scrubbed/strigg/analyses/20241108_RNAseq --download_method sratools Nov-08 18:03:09.478 [main] DEBUG nextflow.cli.CmdRun - N E X T F L O W ~ version 24.04.4 Nov-08 18:03:09.569 [main] DEBUG nextflow.plugin.PluginsFacade - Setting up plugin manager > mode=prod; embedded=false; plugins-dir=/mmfs1/home/strigg/.nextflow/plugins; core-plugins: nf-amazon@2.5.3,nf-azure@1.6.1,nf-cloudcache@0.4.1,nf-codecommit@0.2.1,nf-console@1.1.3,nf-ga4gh@1.3.0,nf-google@1.13.2-patch1,nf-tower@1.9.1,nf-wave@1.4.2-patch1 Nov-08 18:03:09.593 [main] INFO o.pf4j.DefaultPluginStatusProvider - Enabled plugins: [] Nov-08 18:03:09.594 [main] INFO o.pf4j.DefaultPluginStatusProvider - Disabled plugins: [] Nov-08 18:03:09.596 [main] INFO org.pf4j.DefaultPluginManager - PF4J version 3.12.0 in 'deployment' mode Nov-08 18:03:09.622 [main] INFO org.pf4j.AbstractPluginManager - No plugins Nov-08 18:03:09.646 [main] DEBUG nextflow.scm.ProviderConfig - Using SCM config path: /mmfs1/home/strigg/.nextflow/scm Nov-08 18:03:11.349 [main] DEBUG nextflow.scm.AssetManager - Git config: /mmfs1/home/strigg/.nextflow/assets/nf-core/fetchngs/.git/config; branch: master; remote: origin; url: https://github.com/nf-core/fetchngs.git Nov-08 18:03:11.405 [main] DEBUG nextflow.scm.RepositoryFactory - Found Git repository result: [RepositoryFactory] Nov-08 18:03:11.416 [main] DEBUG nextflow.scm.AssetManager - Git config: /mmfs1/home/strigg/.nextflow/assets/nf-core/fetchngs/.git/config; branch: master; remote: origin; url: https://github.com/nf-core/fetchngs.git Nov-08 18:03:12.652 [main] DEBUG nextflow.config.ConfigBuilder - Found config base: /mmfs1/home/strigg/.nextflow/assets/nf-core/fetchngs/nextflow.config Nov-08 18:03:12.693 [main] DEBUG nextflow.config.ConfigBuilder - User config file: /gscratch/srlab/strigg/bin/uw_hyak_srlab.config Nov-08 18:03:12.694 [main] DEBUG nextflow.config.ConfigBuilder - Parsing config file: /mmfs1/home/strigg/.nextflow/assets/nf-core/fetchngs/nextflow.config Nov-08 18:03:12.694 [main] DEBUG nextflow.config.ConfigBuilder - Parsing config file: /gscratch/srlab/strigg/bin/uw_hyak_srlab.config Nov-08 18:03:12.700 [main] DEBUG n.secret.LocalSecretsProvider - Secrets store: /mmfs1/home/strigg/.nextflow/secrets/store.json Nov-08 18:03:12.702 [main] DEBUG nextflow.secret.SecretsLoader - Discovered secrets providers: [nextflow.secret.LocalSecretsProvider@624b523] - activable => nextflow.secret.LocalSecretsProvider@624b523 Nov-08 18:03:12.715 [main] DEBUG nextflow.config.ConfigBuilder - Applying config profile: `standard` Nov-08 18:03:14.551 [main] DEBUG nextflow.config.ConfigBuilder - Applying config profile: `standard` Nov-08 18:03:14.618 [main] WARN nextflow.config.ConfigBuilder - It appears you have never run this project before -- Option `-resume` is ignored Nov-08 18:03:14.671 [main] DEBUG nextflow.cli.CmdRun - Applied DSL=2 from script declaration Nov-08 18:03:14.671 [main] DEBUG nextflow.cli.CmdRun - Launching `https://github.com/nf-core/fetchngs` [adoring_magritte] DSL2 - revision: 8ec2d934f9 [master] Nov-08 18:03:14.690 [main] DEBUG nextflow.plugin.PluginsFacade - Plugins declared=[nf-validation@1.1.3] Nov-08 18:03:14.690 [main] DEBUG nextflow.plugin.PluginsFacade - Plugins default=[] Nov-08 18:03:14.690 [main] DEBUG nextflow.plugin.PluginsFacade - Plugins resolved requirement=[nf-validation@1.1.3] Nov-08 18:03:14.690 [main] DEBUG nextflow.plugin.PluginUpdater - Installing plugin nf-validation version: 1.1.3 Nov-08 18:03:14.697 [main] INFO org.pf4j.AbstractPluginManager - Plugin 'nf-validation@1.1.3' resolved Nov-08 18:03:14.697 [main] INFO org.pf4j.AbstractPluginManager - Start plugin 'nf-validation@1.1.3' Nov-08 18:03:15.074 [main] DEBUG nextflow.plugin.BasePlugin - Plugin started nf-validation@1.1.3 Nov-08 18:03:15.145 [main] DEBUG nextflow.Session - Session UUID: e060eabd-27d1-4f7e-99aa-c60462ee1c1f Nov-08 18:03:15.146 [main] DEBUG nextflow.Session - Run name: adoring_magritte Nov-08 18:03:15.146 [main] DEBUG nextflow.Session - Executor pool size: 2 Nov-08 18:03:15.165 [main] DEBUG nextflow.file.FilePorter - File porter settings maxRetries=3; maxTransfers=50; pollTimeout=null Nov-08 18:03:15.169 [main] DEBUG nextflow.util.ThreadPoolBuilder - Creating thread pool 'FileTransfer' minSize=10; maxSize=10; workQueue=LinkedBlockingQueue[10000]; allowCoreThreadTimeout=false Nov-08 18:03:15.452 [main] DEBUG nextflow.cli.CmdRun - Version: 24.04.4 build 5917 Created: 01-08-2024 07:05 UTC (00:05 PDT) System: Linux 4.18.0-513.18.1.el8_9.x86_64 Runtime: Groovy 4.0.21 on OpenJDK 64-Bit Server VM 17.0.11-internal+0-adhoc..src Encoding: UTF-8 (UTF-8) Process: 68873@n3439 [10.64.66.183] CPUs: 1 - Mem: 100 GB (99.5 GB) - Swap: 74.5 GB (74.5 GB) Nov-08 18:03:15.575 [main] DEBUG nextflow.Session - Work-dir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work [gpfs] Nov-08 18:03:15.620 [main] DEBUG nextflow.executor.ExecutorFactory - Extension executors providers=[] Nov-08 18:03:15.642 [main] DEBUG nextflow.Session - Observer factory: DefaultObserverFactory Nov-08 18:03:15.765 [main] DEBUG nextflow.cache.CacheFactory - Using Nextflow cache factory: nextflow.cache.DefaultCacheFactory Nov-08 18:03:15.771 [main] DEBUG nextflow.util.CustomThreadPool - Creating default thread pool > poolSize: 2; maxThreads: 1000 Nov-08 18:03:16.010 [main] DEBUG nextflow.Session - Session start Nov-08 18:03:16.012 [main] DEBUG nextflow.trace.TraceFileObserver - Workflow started -- trace file: /gscratch/scrubbed/strigg/analyses/20241108_RNAseq/pipeline_info/execution_trace_2024-11-08_18-03-14.txt Nov-08 18:03:16.281 [main] DEBUG nextflow.script.ScriptRunner - > Launching execution Nov-08 18:03:19.193 [main] DEBUG nextflow.script.IncludeDef - Loading included plugin extensions with names: [paramsHelp:paramsHelp]; plugin Id: nf-validation Nov-08 18:03:19.219 [main] DEBUG nextflow.script.IncludeDef - Loading included plugin extensions with names: [paramsSummaryLog:paramsSummaryLog]; plugin Id: nf-validation Nov-08 18:03:19.219 [main] DEBUG nextflow.script.IncludeDef - Loading included plugin extensions with names: [validateParameters:validateParameters]; plugin Id: nf-validation Nov-08 18:03:19.221 [main] DEBUG nextflow.script.IncludeDef - Loading included plugin extensions with names: [fromSamplesheet:fromSamplesheet]; plugin Id: nf-validation Nov-08 18:03:19.223 [main] DEBUG nextflow.script.IncludeDef - Loading included plugin extensions with names: [paramsSummaryMap:paramsSummaryMap]; plugin Id: nf-validation Nov-08 18:03:19.770 [main] DEBUG nextflow.Nextflow - Using schema file: nextflow_schema.json Nov-08 18:03:19.772 [main] WARN nextflow.script.ScriptBinding - Access to undefined parameter `monochromeLogs` -- Initialise it to a default value eg. `params.monochromeLogs = some_value` Nov-08 18:03:19.795 [main] INFO nextflow.Nextflow - ------------------------------------------------------ ,--./,-.  ___ __ __ __ ___ /,-._.--~'  |\ | |__ __ / ` / \ |__) |__ } {  | \| | \__, \__/ | \ |___ \`-._,-`-, `._,._,'  nf-core/fetchngs v1.12.0-g8ec2d93 ------------------------------------------------------ Core Nextflow options revision : master runName : adoring_magritte containerEngine : singularity launchDir : /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq workDir : /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work projectDir : /mmfs1/home/strigg/.nextflow/assets/nf-core/fetchngs userName : strigg profile : standard configFiles :  Input/output options input : /gscratch/scrubbed/strigg/analyses/20241104_RNAseq/ids.csv download_method : sratools outdir : /gscratch/scrubbed/strigg/analyses/20241108_RNAseq Institutional config options config_profile_description: UW Hyak Roberts labs cluster profile provided by nf-core/configs. config_profile_contact : Shelly A. Wanamaker @shellywanamaker config_profile_url : https://faculty.washington.edu/sr320/ Max job request options max_cpus : 40 max_memory : 742 GB max_time : 3d !! Only displaying parameters that differ from the pipeline defaults !! ------------------------------------------------------ If you use nf-core/fetchngs for your analysis please cite: * The pipeline https://doi.org/10.5281/zenodo.5070524 * The nf-core framework https://doi.org/10.1038/s41587-020-0439-x * Software dependencies https://github.com/nf-core/fetchngs/blob/master/CITATIONS.md ------------------------------------------------------ Nov-08 18:03:19.799 [main] DEBUG nextflow.validation.SchemaValidator - Starting parameters validation Nov-08 18:03:19.984 [main] DEBUG nextflow.validation.SchemaValidator - Starting validation: 'input': '/gscratch/scrubbed/strigg/analyses/20241104_RNAseq/ids.csv' with '/mmfs1/home/strigg/.nextflow/assets/nf-core/fetchngs/assets/schema_input.json' Nov-08 18:03:20.028 [main] DEBUG nextflow.validation.SchemaValidator - Validation passed: 'input': '/gscratch/scrubbed/strigg/analyses/20241104_RNAseq/ids.csv' with '/mmfs1/home/strigg/.nextflow/assets/nf-core/fetchngs/assets/schema_input.json' Nov-08 18:03:20.028 [main] DEBUG nextflow.validation.SchemaValidator - Finishing parameters validation Nov-08 18:03:20.240 [main] DEBUG nextflow.script.ProcessConfig - Config settings `withLabel:error_retry` matches labels `error_retry` for process with name NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO Nov-08 18:03:20.254 [main] DEBUG nextflow.script.ProcessConfig - Config settings `withName:SRA_IDS_TO_RUNINFO` matches process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO Nov-08 18:03:20.261 [main] DEBUG nextflow.executor.ExecutorFactory - << taskConfig executor: slurm Nov-08 18:03:20.261 [main] DEBUG nextflow.executor.ExecutorFactory - >> processorType: 'slurm' Nov-08 18:03:20.279 [main] DEBUG nextflow.executor.Executor - [warm up] executor > slurm Nov-08 18:03:20.294 [main] DEBUG n.processor.TaskPollingMonitor - Creating task monitor for executor 'slurm' > capacity: 100; pollInterval: 5s; dumpInterval: 5m Nov-08 18:03:20.296 [main] DEBUG n.processor.TaskPollingMonitor - >>> barrier register (monitor: slurm) Nov-08 18:03:20.297 [main] DEBUG n.processor.TaskPollingMonitor - Creating submit rate limit of 1 submissions per 1 seconds Nov-08 18:03:20.321 [main] DEBUG n.executor.AbstractGridExecutor - Creating executor 'slurm' > queue-stat-interval: 1m Nov-08 18:03:20.424 [main] DEBUG nextflow.script.ProcessConfig - Config settings `withName:SRA_RUNINFO_TO_FTP` matches process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP Nov-08 18:03:20.427 [main] DEBUG nextflow.executor.ExecutorFactory - << taskConfig executor: slurm Nov-08 18:03:20.427 [main] DEBUG nextflow.executor.ExecutorFactory - >> processorType: 'slurm' Nov-08 18:03:20.467 [main] DEBUG nextflow.script.ProcessConfig - Config settings `withLabel:process_low` matches labels `process_low,error_retry` for process with name NFCORE_FETCHNGS:SRA:SRA_FASTQ_FTP Nov-08 18:03:20.468 [main] DEBUG nextflow.script.ProcessConfig - Config settings `withLabel:error_retry` matches labels `process_low,error_retry` for process with name NFCORE_FETCHNGS:SRA:SRA_FASTQ_FTP Nov-08 18:03:20.469 [main] DEBUG nextflow.script.ProcessConfig - Config settings `withName:SRA_FASTQ_FTP` matches process NFCORE_FETCHNGS:SRA:SRA_FASTQ_FTP Nov-08 18:03:20.485 [main] DEBUG nextflow.executor.ExecutorFactory - << taskConfig executor: slurm Nov-08 18:03:20.486 [main] DEBUG nextflow.executor.ExecutorFactory - >> processorType: 'slurm' Nov-08 18:03:20.515 [main] DEBUG nextflow.script.ProcessConfig - Config settings `withLabel:process_low` matches labels `process_low` for process with name NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:CUSTOM_SRATOOLSNCBISETTINGS Nov-08 18:03:20.519 [main] DEBUG nextflow.executor.ExecutorFactory - << taskConfig executor: slurm Nov-08 18:03:20.520 [main] DEBUG nextflow.executor.ExecutorFactory - >> processorType: 'slurm' Nov-08 18:03:20.560 [main] DEBUG nextflow.script.ProcessConfig - Config settings `withLabel:process_low` matches labels `process_low` for process with name NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH Nov-08 18:03:20.561 [main] DEBUG nextflow.script.ProcessConfig - Config settings `withName:SRATOOLS_PREFETCH` matches process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH Nov-08 18:03:20.566 [main] DEBUG nextflow.executor.ExecutorFactory - << taskConfig executor: slurm Nov-08 18:03:20.566 [main] DEBUG nextflow.executor.ExecutorFactory - >> processorType: 'slurm' Nov-08 18:03:20.590 [main] DEBUG nextflow.script.ProcessConfig - Config settings `withLabel:process_medium` matches labels `process_medium` for process with name NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP Nov-08 18:03:20.591 [main] DEBUG nextflow.script.ProcessConfig - Config settings `withName:SRATOOLS_FASTERQDUMP` matches process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP Nov-08 18:03:20.595 [main] DEBUG nextflow.executor.ExecutorFactory - << taskConfig executor: slurm Nov-08 18:03:20.607 [main] DEBUG nextflow.executor.ExecutorFactory - >> processorType: 'slurm' Nov-08 18:03:20.637 [main] DEBUG nextflow.script.ProcessConfig - Config settings `withLabel:process_medium` matches labels `process_medium` for process with name NFCORE_FETCHNGS:SRA:ASPERA_CLI Nov-08 18:03:20.638 [main] DEBUG nextflow.script.ProcessConfig - Config settings `withName:ASPERA_CLI` matches process NFCORE_FETCHNGS:SRA:ASPERA_CLI Nov-08 18:03:20.640 [main] DEBUG nextflow.executor.ExecutorFactory - << taskConfig executor: slurm Nov-08 18:03:20.640 [main] DEBUG nextflow.executor.ExecutorFactory - >> processorType: 'slurm' Nov-08 18:03:20.693 [main] DEBUG nextflow.script.ProcessConfig - Config settings `withName:SRA_TO_SAMPLESHEET` matches process NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET Nov-08 18:03:20.696 [main] DEBUG nextflow.executor.ExecutorFactory - << taskConfig executor: local Nov-08 18:03:20.697 [main] DEBUG nextflow.executor.ExecutorFactory - >> processorType: 'local' Nov-08 18:03:20.714 [main] DEBUG nextflow.executor.Executor - [warm up] executor > local Nov-08 18:03:20.718 [main] DEBUG n.processor.LocalPollingMonitor - Creating local task monitor for executor 'local' > cpus=1; memory=100 GB; capacity=1; pollInterval=100ms; dumpInterval=5m Nov-08 18:03:20.719 [main] DEBUG n.processor.TaskPollingMonitor - >>> barrier register (monitor: local) Nov-08 18:03:20.719 [main] DEBUG n.processor.TaskPollingMonitor - Creating submit rate limit of 1 submissions per 1 seconds Nov-08 18:03:20.809 [main] DEBUG nextflow.script.ProcessConfig - Config settings `withName:MULTIQC_MAPPINGS_CONFIG` matches process NFCORE_FETCHNGS:SRA:MULTIQC_MAPPINGS_CONFIG Nov-08 18:03:20.811 [main] DEBUG nextflow.executor.ExecutorFactory - << taskConfig executor: slurm Nov-08 18:03:20.811 [main] DEBUG nextflow.executor.ExecutorFactory - >> processorType: 'slurm' Nov-08 18:03:20.834 [main] DEBUG nextflow.Session - Config process names validation disabled as requested Nov-08 18:03:20.851 [main] DEBUG nextflow.Session - Igniting dataflow network (14) Nov-08 18:03:20.852 [main] DEBUG nextflow.processor.TaskProcessor - Starting process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO Nov-08 18:03:20.852 [main] DEBUG nextflow.processor.TaskProcessor - Starting process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP Nov-08 18:03:20.852 [main] DEBUG nextflow.processor.TaskProcessor - Starting process > NFCORE_FETCHNGS:SRA:SRA_FASTQ_FTP Nov-08 18:03:20.852 [main] DEBUG nextflow.processor.TaskProcessor - Starting process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:CUSTOM_SRATOOLSNCBISETTINGS Nov-08 18:03:20.868 [main] DEBUG nextflow.processor.TaskProcessor - Starting process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH Nov-08 18:03:20.868 [main] DEBUG nextflow.processor.TaskProcessor - Starting process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP Nov-08 18:03:20.869 [main] DEBUG nextflow.processor.TaskProcessor - Starting process > NFCORE_FETCHNGS:SRA:ASPERA_CLI Nov-08 18:03:20.869 [main] DEBUG nextflow.processor.TaskProcessor - Starting process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET Nov-08 18:03:20.869 [main] DEBUG nextflow.processor.TaskProcessor - Starting process > NFCORE_FETCHNGS:SRA:MULTIQC_MAPPINGS_CONFIG Nov-08 18:03:20.885 [main] DEBUG nextflow.script.ScriptRunner - Parsed script files: Script_acdf5c75414b64a7: /mmfs1/home/strigg/.nextflow/assets/nf-core/fetchngs/./workflows/sra/../../modules/local/multiqc_mappings_config/main.nf Script_0b19867a805793b5: /mmfs1/home/strigg/.nextflow/assets/nf-core/fetchngs/./workflows/sra/../../subworkflows/nf-core/fastq_download_prefetch_fasterqdump_sratools/../../../modules/nf-core/custom/sratoolsncbisettings/main.nf Script_ce0dbbb175f3fbb3: /mmfs1/home/strigg/.nextflow/assets/nf-core/fetchngs/./subworkflows/local/utils_nfcore_fetchngs_pipeline/main.nf Script_ecccbd2ace139150: /mmfs1/home/strigg/.nextflow/assets/nf-core/fetchngs/main.nf Script_021e0c2a2b0acb95: /mmfs1/home/strigg/.nextflow/assets/nf-core/fetchngs/./workflows/sra/../../subworkflows/nf-core/fastq_download_prefetch_fasterqdump_sratools/../../../modules/nf-core/sratools/fasterqdump/main.nf Script_13a134c588d4965b: /mmfs1/home/strigg/.nextflow/assets/nf-core/fetchngs/./workflows/sra/../../subworkflows/nf-core/fastq_download_prefetch_fasterqdump_sratools/main.nf Script_2e98d68d92094a51: /mmfs1/home/strigg/.nextflow/assets/nf-core/fetchngs/./workflows/sra/../../modules/local/aspera_cli/main.nf Script_34a6e65ee7dbdbe0: /mmfs1/home/strigg/.nextflow/assets/nf-core/fetchngs/./subworkflows/local/utils_nfcore_fetchngs_pipeline/../../nf-core/utils_nextflow_pipeline/main.nf Script_a7d371fe23db7aab: /mmfs1/home/strigg/.nextflow/assets/nf-core/fetchngs/./subworkflows/local/utils_nfcore_fetchngs_pipeline/../../nf-core/utils_nfvalidation_plugin/main.nf Script_be0adedc591c66cc: /mmfs1/home/strigg/.nextflow/assets/nf-core/fetchngs/./workflows/sra/../../subworkflows/nf-core/utils_nfcore_pipeline/main.nf Script_8e47246e1eaac81c: /mmfs1/home/strigg/.nextflow/assets/nf-core/fetchngs/./workflows/sra/../../modules/local/sra_to_samplesheet/main.nf Script_7fead60763b2b030: /mmfs1/home/strigg/.nextflow/assets/nf-core/fetchngs/./workflows/sra/../../modules/local/sra_ids_to_runinfo/main.nf Script_ba8dd5d95260fdf7: /mmfs1/home/strigg/.nextflow/assets/nf-core/fetchngs/./workflows/sra/../../subworkflows/nf-core/fastq_download_prefetch_fasterqdump_sratools/../../../modules/nf-core/sratools/prefetch/main.nf Script_3c69d3862c8e77dc: /mmfs1/home/strigg/.nextflow/assets/nf-core/fetchngs/./workflows/sra/../../modules/local/sra_fastq_ftp/main.nf Script_907f29c748a0f2e5: /mmfs1/home/strigg/.nextflow/assets/nf-core/fetchngs/./workflows/sra/main.nf Script_a9ea706fbcc7c682: /mmfs1/home/strigg/.nextflow/assets/nf-core/fetchngs/./workflows/sra/../../modules/local/sra_runinfo_to_ftp/main.nf Nov-08 18:03:20.885 [main] DEBUG nextflow.script.ScriptRunner - > Awaiting termination Nov-08 18:03:20.885 [main] DEBUG nextflow.Session - Session await Nov-08 18:03:20.999 [Actor Thread 1] DEBUG nextflow.container.SingularityCache - Singularity found local store for image=https://depot.galaxyproject.org/singularity/python:3.9--1; path=/gscratch/scrubbed/srlab/.apptainer/depot.galaxyproject.org-singularity-python-3.9--1.img Nov-08 18:03:21.022 [Actor Thread 3] DEBUG nextflow.util.HashBuilder - Hash asset file sha-256: /mmfs1/home/strigg/.nextflow/assets/nf-core/fetchngs/bin/sra_ids_to_runinfo.py Nov-08 18:03:21.801 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059128) > jobId: 21957362; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/0a/4816206557402fe98e6d8a6f883f38 Nov-08 18:03:21.802 [Task submitter] INFO nextflow.Session - [0a/481620] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059128) Nov-08 18:03:22.497 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059127) > jobId: 21957363; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/df/5945281a450244c8997f18d42bd9d8 Nov-08 18:03:22.497 [Task submitter] INFO nextflow.Session - [df/594528] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059127) Nov-08 18:03:22.764 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059129) > jobId: 21957364; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/f5/58446bf9fad0518cde4949778c52b6 Nov-08 18:03:22.765 [Task submitter] INFO nextflow.Session - [f5/58446b] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059129) Nov-08 18:03:23.616 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059130) > jobId: 21957365; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/14/2a0669bcc6f50842ded02a64e261bb Nov-08 18:03:23.616 [Task submitter] INFO nextflow.Session - [14/2a0669] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059130) Nov-08 18:03:24.412 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059131) > jobId: 21957366; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/83/b7bcb8e0a13d1e27d153c366b4dc01 Nov-08 18:03:24.412 [Task submitter] INFO nextflow.Session - [83/b7bcb8] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059131) Nov-08 18:03:25.558 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059133) > jobId: 21957367; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/b0/4edc783b2d030eb692d9f8972c1ec3 Nov-08 18:03:25.558 [Task submitter] INFO nextflow.Session - [b0/4edc78] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059133) Nov-08 18:03:26.441 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059132) > jobId: 21957368; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/99/e18e225f5ba537b2499b4bbd8d7309 Nov-08 18:03:26.441 [Task submitter] INFO nextflow.Session - [99/e18e22] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059132) Nov-08 18:03:27.459 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059134) > jobId: 21957369; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ec/661ff48ca975a623d47fa9a616c3a2 Nov-08 18:03:27.459 [Task submitter] INFO nextflow.Session - [ec/661ff4] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059134) Nov-08 18:03:28.513 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059136) > jobId: 21957371; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/50/824cd60200103e3c6a556d92ab8253 Nov-08 18:03:28.513 [Task submitter] INFO nextflow.Session - [50/824cd6] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059136) Nov-08 18:03:29.398 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059135) > jobId: 21957372; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/1e/41fe1fc5ca1aedd6b54cd9d1acda88 Nov-08 18:03:29.398 [Task submitter] INFO nextflow.Session - [1e/41fe1f] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059135) Nov-08 18:03:32.333 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059137) > jobId: 21957373; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/82/7a109b9a9d1eb0d2322e6d1deeb452 Nov-08 18:03:32.333 [Task submitter] INFO nextflow.Session - [82/7a109b] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059137) Nov-08 18:03:32.432 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059138) > jobId: 21957374; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ea/d3f88d76526b2d58d7df494d4ba01e Nov-08 18:03:32.433 [Task submitter] INFO nextflow.Session - [ea/d3f88d] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059138) Nov-08 18:03:32.609 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059140) > jobId: 21957375; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d7/55387fa7c9435069938ccb312eb26b Nov-08 18:03:32.609 [Task submitter] INFO nextflow.Session - [d7/55387f] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059140) Nov-08 18:03:34.833 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059139) > jobId: 21957376; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/07/abf06849fa66c5783d5542a0453bb7 Nov-08 18:03:34.834 [Task submitter] INFO nextflow.Session - [07/abf068] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059139) Nov-08 18:03:34.933 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059141) > jobId: 21957377; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/6f/9bb057418e58bed1c620b586a0d29b Nov-08 18:03:34.933 [Task submitter] INFO nextflow.Session - [6f/9bb057] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059141) Nov-08 18:03:37.379 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059142) > jobId: 21957378; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/b3/92a4398ed7a3407106fd0e760131cd Nov-08 18:03:37.379 [Task submitter] INFO nextflow.Session - [b3/92a439] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059142) Nov-08 18:03:37.501 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059143) > jobId: 21957383; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/82/9baad391fbad21a996942b068297c4 Nov-08 18:03:37.502 [Task submitter] INFO nextflow.Session - [82/9baad3] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059143) Nov-08 18:03:37.601 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059144) > jobId: 21957384; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/3b/4447954727fdb6b389e09b4f62c2e7 Nov-08 18:03:37.601 [Task submitter] INFO nextflow.Session - [3b/444795] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059144) Nov-08 18:03:38.484 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059145) > jobId: 21957385; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d0/a480036edad1466c59a8bbe335d2d3 Nov-08 18:03:38.484 [Task submitter] INFO nextflow.Session - [d0/a48003] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059145) Nov-08 18:03:39.527 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059146) > jobId: 21957387; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/3d/3ee27e0d94cf5ff84d3002b179c27b Nov-08 18:03:39.528 [Task submitter] INFO nextflow.Session - [3d/3ee27e] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059146) Nov-08 18:03:40.561 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059147) > jobId: 21957388; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/38/2e08fe0b7480c3ab8e4868b777db71 Nov-08 18:03:40.561 [Task submitter] INFO nextflow.Session - [38/2e08fe] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059147) Nov-08 18:03:41.494 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059148) > jobId: 21957389; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/cf/a9804f18c42ecbbedb01fec8874c68 Nov-08 18:03:41.494 [Task submitter] INFO nextflow.Session - [cf/a9804f] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059148) Nov-08 18:03:42.475 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059149) > jobId: 21957391; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/55/ba997bd451fb67a77f77d3af22a4ad Nov-08 18:03:42.475 [Task submitter] INFO nextflow.Session - [55/ba997b] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059149) Nov-08 18:03:43.464 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059150) > jobId: 21957393; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/70/a649a4d93770f6a8d0f358a0c1cf45 Nov-08 18:03:43.465 [Task submitter] INFO nextflow.Session - [70/a649a4] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059150) Nov-08 18:03:44.484 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059151) > jobId: 21957394; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/1b/e80adf16cda0f0f7b723a52a90fb63 Nov-08 18:03:44.484 [Task submitter] INFO nextflow.Session - [1b/e80adf] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059151) Nov-08 18:03:45.625 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059152) > jobId: 21957396; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/fd/82478c8e389a1df0b4abea5e64d3ff Nov-08 18:03:45.625 [Task submitter] INFO nextflow.Session - [fd/82478c] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059152) Nov-08 18:03:46.547 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059153) > jobId: 21957399; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/cb/c2177253c457e9907a6a099d98081e Nov-08 18:03:46.547 [Task submitter] INFO nextflow.Session - [cb/c21772] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059153) Nov-08 18:03:47.544 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059155) > jobId: 21957400; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/2b/565f9f752b2aa73f773fa715f4665c Nov-08 18:03:47.544 [Task submitter] INFO nextflow.Session - [2b/565f9f] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059155) Nov-08 18:03:48.644 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059154) > jobId: 21957405; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/5b/0a4cc06e2322a310146a07f2339e00 Nov-08 18:03:48.645 [Task submitter] INFO nextflow.Session - [5b/0a4cc0] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059154) Nov-08 18:03:49.606 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059156) > jobId: 21957406; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d1/af112d54bdce0ede720523dc5ae1a9 Nov-08 18:03:49.606 [Task submitter] INFO nextflow.Session - [d1/af112d] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059156) Nov-08 18:03:50.489 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059157) > jobId: 21957407; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/af/4341d432aa51c360c3177afe861956 Nov-08 18:03:50.489 [Task submitter] INFO nextflow.Session - [af/4341d4] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059157) Nov-08 18:03:51.479 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059158) > jobId: 21957408; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/8f/e54c5e7b4d13a744e03d2d1c3ba326 Nov-08 18:03:51.479 [Task submitter] INFO nextflow.Session - [8f/e54c5e] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059158) Nov-08 18:03:52.526 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059159) > jobId: 21957411; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/f3/85752c60e8bc813767d080554ad6d5 Nov-08 18:03:52.526 [Task submitter] INFO nextflow.Session - [f3/85752c] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059159) Nov-08 18:03:55.323 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957363; id: 1; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059127); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/df/5945281a450244c8997f18d42bd9d8 started: 1731117825325; exited: 2024-11-09T02:03:54.749653935Z; ] Nov-08 18:03:55.324 [Task monitor] DEBUG nextflow.util.ThreadPoolBuilder - Creating thread pool 'TaskFinalizer' minSize=10; maxSize=10; workQueue=LinkedBlockingQueue[10000]; allowCoreThreadTimeout=false Nov-08 18:03:55.349 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957364; id: 3; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059129); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/f5/58446bf9fad0518cde4949778c52b6 started: 1731117830356; exited: 2024-11-09T02:03:54.760541742Z; ] Nov-08 18:03:55.396 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957365; id: 4; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059130); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/14/2a0669bcc6f50842ded02a64e261bb started: 1731117830411; exited: 2024-11-09T02:03:54.730202542Z; ] Nov-08 18:03:55.460 [Actor Thread 1] DEBUG nextflow.util.HashBuilder - Hash asset file sha-256: /mmfs1/home/strigg/.nextflow/assets/nf-core/fetchngs/bin/sra_runinfo_to_ftp.py Nov-08 18:03:55.470 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957366; id: 5; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059131); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/83/b7bcb8e0a13d1e27d153c366b4dc01 started: 1731117825358; exited: 2024-11-09T02:03:54.778166882Z; ] Nov-08 18:03:55.549 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957367; id: 7; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059133); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/b0/4edc783b2d030eb692d9f8972c1ec3 started: 1731117830461; exited: 2024-11-09T02:03:53.493215277Z; ] Nov-08 18:03:55.585 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957368; id: 6; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059132); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/99/e18e225f5ba537b2499b4bbd8d7309 started: 1731117825369; exited: 2024-11-09T02:03:54.49892597Z; ] Nov-08 18:03:55.606 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957369; id: 8; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059134); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ec/661ff48ca975a623d47fa9a616c3a2 started: 1731117820332; exited: 2024-11-09T02:03:52.821172926Z; ] Nov-08 18:03:56.505 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059160) > jobId: 21957412; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/74/ad390fd5cadb07e2b67d792501ab7c Nov-08 18:03:56.505 [Task submitter] INFO nextflow.Session - [74/ad390f] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059160) Nov-08 18:03:56.592 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059161) > jobId: 21957413; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/5c/5d7d99d8a921a108b11d913745ec72 Nov-08 18:03:56.592 [Task submitter] INFO nextflow.Session - [5c/5d7d99] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059161) Nov-08 18:03:56.667 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059163) > jobId: 21957414; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/36/c5ee6dca8ad402c5395c45fad90a15 Nov-08 18:03:56.667 [Task submitter] INFO nextflow.Session - [36/c5ee6d] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059163) Nov-08 18:03:57.672 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059162) > jobId: 21957418; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/a4/c16a7a626ca05d221549c1f561186b Nov-08 18:03:57.672 [Task submitter] INFO nextflow.Session - [a4/c16a7a] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059162) Nov-08 18:03:58.635 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059164) > jobId: 21957419; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/59/2350dfbe3c90e60b3f4b7a1544ddf0 Nov-08 18:03:58.636 [Task submitter] INFO nextflow.Session - [59/2350df] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059164) Nov-08 18:03:59.619 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059166) > jobId: 21957420; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/12/ac4f099697fbe3656ef8eacc95d334 Nov-08 18:03:59.619 [Task submitter] INFO nextflow.Session - [12/ac4f09] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059166) Nov-08 18:04:00.318 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957371; id: 10; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059136); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/50/824cd60200103e3c6a556d92ab8253 started: 1731117825401; exited: 2024-11-09T02:03:56.669146496Z; ] Nov-08 18:04:00.349 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957372; id: 9; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059135); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/1e/41fe1fc5ca1aedd6b54cd9d1acda88 started: 1731117825424; exited: 2024-11-09T02:03:58.661479801Z; ] Nov-08 18:04:00.674 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059165) > jobId: 21957421; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/35/8fca53f88c24b1434e82fe43c6e73e Nov-08 18:04:00.674 [Task submitter] INFO nextflow.Session - [35/8fca53] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059165) Nov-08 18:04:01.622 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059167) > jobId: 21957422; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/e6/81c2bfec03bf622b87a6783d4b55a9 Nov-08 18:04:01.623 [Task submitter] INFO nextflow.Session - [e6/81c2bf] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059167) Nov-08 18:04:02.661 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059169) > jobId: 21957423; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d3/2a22b1f365d365d802dde37415fd3f Nov-08 18:04:02.661 [Task submitter] INFO nextflow.Session - [d3/2a22b1] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059169) Nov-08 18:04:03.710 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059170) > jobId: 21957424; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/73/f75c478a5649fe1c35b4c4fcf969cb Nov-08 18:04:03.711 [Task submitter] INFO nextflow.Session - [73/f75c47] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059170) Nov-08 18:04:04.801 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059171) > jobId: 21957425; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/a0/0526fa5063323bce4fdbee6a3b1328 Nov-08 18:04:04.801 [Task submitter] INFO nextflow.Session - [a0/0526fa] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059171) Nov-08 18:04:05.588 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059172) > jobId: 21957426; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/19/9f19ee460873f040aa7db31ccb7c0d Nov-08 18:04:05.588 [Task submitter] INFO nextflow.Session - [19/9f19ee] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059172) Nov-08 18:04:06.625 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059173) > jobId: 21957428; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/c6/b020ebad93c8374836c1e6d885deb8 Nov-08 18:04:06.625 [Task submitter] INFO nextflow.Session - [c6/b020eb] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059173) Nov-08 18:04:07.609 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059174) > jobId: 21957429; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/13/c49c13765f078e820030c261173d22 Nov-08 18:04:07.609 [Task submitter] INFO nextflow.Session - [13/c49c13] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059174) Nov-08 18:04:10.066 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059175) > jobId: 21957431; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ca/5a39b29ff3765a93adc53705bc7bb3 Nov-08 18:04:10.066 [Task submitter] INFO nextflow.Session - [ca/5a39b2] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059175) Nov-08 18:04:10.188 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059176) > jobId: 21957434; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/1b/abf6d202e9d582515b8ccb7bf195fb Nov-08 18:04:10.188 [Task submitter] INFO nextflow.Session - [1b/abf6d2] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059176) Nov-08 18:04:10.315 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957362; id: 2; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059128); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/0a/4816206557402fe98e6d8a6f883f38 started: 1731117830315; exited: 2024-11-09T02:04:09.579030678Z; ] Nov-08 18:04:12.700 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059177) > jobId: 21957435; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/50/75ccefe3124206dd2ea791aeaf2746 Nov-08 18:04:12.700 [Task submitter] INFO nextflow.Session - [50/75ccef] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059177) Nov-08 18:04:12.996 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059178) > jobId: 21957436; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/aa/960945ddb170366c44969612787e0e Nov-08 18:04:12.996 [Task submitter] INFO nextflow.Session - [aa/960945] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059178) Nov-08 18:04:13.120 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059179) > jobId: 21957441; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/e1/505b1cda968bfdb451682f20bc4be8 Nov-08 18:04:13.120 [Task submitter] INFO nextflow.Session - [e1/505b1c] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059179) Nov-08 18:04:15.303 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059180) > jobId: 21957442; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/00/3119b616daa598c9c09b2a4a5df669 Nov-08 18:04:15.303 [Task submitter] INFO nextflow.Session - [00/3119b6] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059180) Nov-08 18:04:15.497 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059181) > jobId: 21957443; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/6c/25c249898712ed8ffefa995abfca37 Nov-08 18:04:15.497 [Task submitter] INFO nextflow.Session - [6c/25c249] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059181) Nov-08 18:04:16.714 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059182) > jobId: 21957445; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/3d/655bf279e0ca55cd048c7823ea9431 Nov-08 18:04:16.714 [Task submitter] INFO nextflow.Session - [3d/655bf2] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059182) Nov-08 18:04:16.912 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059183) > jobId: 21957449; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/08/9d9c0ed885c986587e775b6d511eae Nov-08 18:04:16.912 [Task submitter] INFO nextflow.Session - [08/9d9c0e] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059183) Nov-08 18:04:17.794 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059184) > jobId: 21957450; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d2/2c7fe3a041cd79f092c4298b72c347 Nov-08 18:04:17.794 [Task submitter] INFO nextflow.Session - [d2/2c7fe3] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059184) Nov-08 18:04:18.841 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059185) > jobId: 21957457; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/61/32c7b10b38657eef80e56a4f8986e7 Nov-08 18:04:18.841 [Task submitter] INFO nextflow.Session - [61/32c7b1] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059185) Nov-08 18:04:19.833 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059186) > jobId: 21957460; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/0a/9ce2422bfa954bd76d4bec4dc0725b Nov-08 18:04:19.834 [Task submitter] INFO nextflow.Session - [0a/9ce242] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059186) Nov-08 18:04:20.825 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059187) > jobId: 21957464; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/7e/bcba5eff4afe32e08032bf726d73e7 Nov-08 18:04:20.826 [Task submitter] INFO nextflow.Session - [7e/bcba5e] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059187) Nov-08 18:04:21.879 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995873) > jobId: 21957465; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/3c/bf01a8128c909d640e5558387b86c5 Nov-08 18:04:21.879 [Task submitter] INFO nextflow.Session - [3c/bf01a8] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995873) Nov-08 18:04:22.789 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995874) > jobId: 21957466; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/b6/440b8b39399b780bd78ae123af8ec6 Nov-08 18:04:22.790 [Task submitter] INFO nextflow.Session - [b6/440b8b] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995874) Nov-08 18:04:23.791 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995875) > jobId: 21957467; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/f0/e35d3e545ffc5abe3b1645e498a14f Nov-08 18:04:23.791 [Task submitter] INFO nextflow.Session - [f0/e35d3e] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995875) Nov-08 18:04:24.804 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995876) > jobId: 21957468; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/64/c1f4429cb68e6e9d1134cc9f77897b Nov-08 18:04:24.805 [Task submitter] INFO nextflow.Session - [64/c1f442] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995876) Nov-08 18:04:25.804 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995877) > jobId: 21957469; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/60/7e51a32da5f79853e7cb54518d9afa Nov-08 18:04:25.804 [Task submitter] INFO nextflow.Session - [60/7e51a3] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995877) Nov-08 18:04:26.849 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995878) > jobId: 21957470; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/6c/108e7dcfee8da0d7ebca90d89985d3 Nov-08 18:04:26.849 [Task submitter] INFO nextflow.Session - [6c/108e7d] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995878) Nov-08 18:04:27.941 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995879) > jobId: 21957472; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/df/e42fe6d13c19310e6db6227c59d3a8 Nov-08 18:04:27.941 [Task submitter] INFO nextflow.Session - [df/e42fe6] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995879) Nov-08 18:04:28.790 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995880) > jobId: 21957473; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/62/9f1b0ae891675f2506746076b29413 Nov-08 18:04:28.790 [Task submitter] INFO nextflow.Session - [62/9f1b0a] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995880) Nov-08 18:04:29.797 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995881) > jobId: 21957474; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/b9/3cbc69921f81d6fafede63c8065b2c Nov-08 18:04:29.797 [Task submitter] INFO nextflow.Session - [b9/3cbc69] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995881) Nov-08 18:04:30.801 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995882) > jobId: 21957475; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/cc/17d6266b867c510ad9804896ae2c7e Nov-08 18:04:30.801 [Task submitter] INFO nextflow.Session - [cc/17d626] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995882) Nov-08 18:04:31.820 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995883) > jobId: 21957476; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/84/627f6fa939b46dd477e5a618833b3c Nov-08 18:04:31.820 [Task submitter] INFO nextflow.Session - [84/627f6f] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995883) Nov-08 18:04:32.883 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995884) > jobId: 21957477; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/90/0a7bdd688e7c8707b75ad0712c91df Nov-08 18:04:32.883 [Task submitter] INFO nextflow.Session - [90/0a7bdd] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995884) Nov-08 18:04:33.939 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995885) > jobId: 21957479; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/f6/71ccd1b17932dd7cda3d5a89ec5a24 Nov-08 18:04:33.939 [Task submitter] INFO nextflow.Session - [f6/71ccd1] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995885) Nov-08 18:04:34.804 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059168) > jobId: 21957480; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/f3/06949447beec6d7b9ea1a276f94331 Nov-08 18:04:34.804 [Task submitter] INFO nextflow.Session - [f3/069494] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059168) Nov-08 18:04:35.830 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995886) > jobId: 21957482; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/20/a3ee2f624ade7eb9dfdd2a8b02e3b3 Nov-08 18:04:35.830 [Task submitter] INFO nextflow.Session - [20/a3ee2f] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995886) Nov-08 18:04:36.822 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995887) > jobId: 21957485; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/8e/7bab6dc55a72a1e0566aefed35e9fb Nov-08 18:04:36.822 [Task submitter] INFO nextflow.Session - [8e/7bab6d] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995887) Nov-08 18:04:37.841 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995888) > jobId: 21957486; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/af/be821e25694a6cf654e94744cfa828 Nov-08 18:04:37.841 [Task submitter] INFO nextflow.Session - [af/be821e] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995888) Nov-08 18:04:38.903 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995889) > jobId: 21957488; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/98/239b8b7c7e0a401d21a03f68938800 Nov-08 18:04:38.904 [Task submitter] INFO nextflow.Session - [98/239b8b] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995889) Nov-08 18:04:39.969 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995891) > jobId: 21957489; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/e0/468cfc4bf469b0dc030c5b85bb40de Nov-08 18:04:39.969 [Task submitter] INFO nextflow.Session - [e0/468cfc] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995891) Nov-08 18:04:40.803 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995890) > jobId: 21957495; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/29/02c56e2b56dd95203e7830f75c4b6c Nov-08 18:04:40.804 [Task submitter] INFO nextflow.Session - [29/02c56e] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995890) Nov-08 18:04:41.787 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995892) > jobId: 21957496; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ba/a8aee6dcd5973a0b30430273767179 Nov-08 18:04:41.787 [Task submitter] INFO nextflow.Session - [ba/a8aee6] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995892) Nov-08 18:04:42.828 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995893) > jobId: 21957497; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/16/0de2df1e34bf8342ebd417a4c07e45 Nov-08 18:04:42.828 [Task submitter] INFO nextflow.Session - [16/0de2df] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995893) Nov-08 18:04:43.847 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995895) > jobId: 21957499; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/aa/8c6b1f748401b8c460b1bc3604a275 Nov-08 18:04:43.848 [Task submitter] INFO nextflow.Session - [aa/8c6b1f] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995895) Nov-08 18:04:44.903 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995894) > jobId: 21957500; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/b7/3d9ef1bf7f1b343c71bbe4289f0e3e Nov-08 18:04:44.903 [Task submitter] INFO nextflow.Session - [b7/3d9ef1] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995894) Nov-08 18:04:45.966 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995897) > jobId: 21957501; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/3b/de85ccb30781e3e00d6a1b46f25870 Nov-08 18:04:45.966 [Task submitter] INFO nextflow.Session - [3b/de85cc] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995897) Nov-08 18:04:48.917 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995896) > jobId: 21957502; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/9d/6c4e1ed2bce5d499df6c311d7c6497 Nov-08 18:04:48.918 [Task submitter] INFO nextflow.Session - [9d/6c4e1e] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995896) Nov-08 18:04:49.146 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995898) > jobId: 21957503; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/99/652c2307e95a9631ee2b180d0a41e7 Nov-08 18:04:49.147 [Task submitter] INFO nextflow.Session - [99/652c23] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995898) Nov-08 18:04:49.222 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995899) > jobId: 21957504; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/52/beb73f918a0303d69c234463ff311a Nov-08 18:04:49.222 [Task submitter] INFO nextflow.Session - [52/beb73f] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995899) Nov-08 18:04:51.616 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995900) > jobId: 21957505; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/65/1e40779af16f26451fbce5633a4d2a Nov-08 18:04:51.616 [Task submitter] INFO nextflow.Session - [65/1e4077] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995900) Nov-08 18:04:51.703 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995901) > jobId: 21957506; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/27/7cf4001f74568ee3fd8c8709806b81 Nov-08 18:04:51.703 [Task submitter] INFO nextflow.Session - [27/7cf400] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995901) Nov-08 18:04:57.161 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995903) > jobId: 21957507; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/65/ffc5871a0797ca166f08038fd6791e Nov-08 18:04:57.161 [Task submitter] INFO nextflow.Session - [65/ffc587] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995903) Nov-08 18:04:59.271 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995902) > jobId: 21957508; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/7f/f5d10e7f992e0dfb32c80361c9b47d Nov-08 18:04:59.271 [Task submitter] INFO nextflow.Session - [7f/f5d10e] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995902) Nov-08 18:04:59.399 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995904) > jobId: 21957514; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/3a/6d82a945fb87fc5a228b31cb9d98c5 Nov-08 18:04:59.400 [Task submitter] INFO nextflow.Session - [3a/6d82a9] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995904) Nov-08 18:04:59.600 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995905) > jobId: 21957515; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/53/6dfe8116688453be60b643e9f4f13a Nov-08 18:04:59.600 [Task submitter] INFO nextflow.Session - [53/6dfe81] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995905) Nov-08 18:05:01.146 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995907) > jobId: 21957517; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/56/f751fdef3a7ce1bf2bb73b1540c71a Nov-08 18:05:01.146 [Task submitter] INFO nextflow.Session - [56/f751fd] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995907) Nov-08 18:05:01.432 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995906) > jobId: 21957518; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/57/6881120637eed8cd976f64a74b29c5 Nov-08 18:05:01.432 [Task submitter] INFO nextflow.Session - [57/688112] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995906) Nov-08 18:05:02.472 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995909) > jobId: 21957519; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/37/343e2bce8380a6d73cf6132f6e6467 Nov-08 18:05:02.473 [Task submitter] INFO nextflow.Session - [37/343e2b] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995909) Nov-08 18:05:03.370 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995908) > jobId: 21957521; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/4c/b7a814bab79cfba3bb9f5370db1acd Nov-08 18:05:03.370 [Task submitter] INFO nextflow.Session - [4c/b7a814] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995908) Nov-08 18:05:04.376 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995911) > jobId: 21957522; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d8/e61128d50ee84c8ee5045fcd83a159 Nov-08 18:05:04.377 [Task submitter] INFO nextflow.Session - [d8/e61128] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995911) Nov-08 18:05:05.392 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995910) > jobId: 21957523; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/47/729b2c16805502c73be145e8756005 Nov-08 18:05:05.392 [Task submitter] INFO nextflow.Session - [47/729b2c] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995910) Nov-08 18:05:06.359 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995912) > jobId: 21957524; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/e4/9c32e8579ccfc6f5f50d42d8ca0767 Nov-08 18:05:06.359 [Task submitter] INFO nextflow.Session - [e4/9c32e8] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995912) Nov-08 18:05:07.435 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993892) > jobId: 21957525; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/41/1d7f212344e3296f7bb563a4ad6280 Nov-08 18:05:07.435 [Task submitter] INFO nextflow.Session - [41/1d7f21] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993892) Nov-08 18:05:08.489 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993893) > jobId: 21957526; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/a6/ff0e753924474a38de8ccce978b7c7 Nov-08 18:05:08.489 [Task submitter] INFO nextflow.Session - [a6/ff0e75] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993893) Nov-08 18:05:09.540 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993894) > jobId: 21957532; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/2c/8a432cb79c6112bcb1af5daa30bf58 Nov-08 18:05:09.540 [Task submitter] INFO nextflow.Session - [2c/8a432c] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993894) Nov-08 18:05:10.362 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993895) > jobId: 21957533; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/56/2d20d07f81fe41fd8997b0a35693e0 Nov-08 18:05:10.362 [Task submitter] INFO nextflow.Session - [56/2d20d0] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993895) Nov-08 18:05:11.362 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993896) > jobId: 21957534; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ee/864a6d9c46440db3a5b65d044ebe90 Nov-08 18:05:11.362 [Task submitter] INFO nextflow.Session - [ee/864a6d] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993896) Nov-08 18:05:12.379 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993897) > jobId: 21957535; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/b5/e375015032d29a32ddde16d2e584c7 Nov-08 18:05:12.379 [Task submitter] INFO nextflow.Session - [b5/e37501] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993897) Nov-08 18:05:13.432 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993898) > jobId: 21957540; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/94/637c413472eedc29300b592d18f2a7 Nov-08 18:05:13.432 [Task submitter] INFO nextflow.Session - [94/637c41] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993898) Nov-08 18:05:14.497 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993900) > jobId: 21957541; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d7/295d8a76e2ad270eb898797b6876e4 Nov-08 18:05:14.497 [Task submitter] INFO nextflow.Session - [d7/295d8a] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993900) Nov-08 18:05:15.369 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993899) > jobId: 21957542; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/5d/c338ef5c186530424e7da293c954d2 Nov-08 18:05:15.369 [Task submitter] INFO nextflow.Session - [5d/c338ef] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993899) Nov-08 18:05:50.544 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957385; id: 19; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059145); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d0/a480036edad1466c59a8bbe335d2d3 started: 1731117945443; exited: 2024-11-09T02:05:47.588456551Z; ] Nov-08 18:05:50.884 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957387; id: 20; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059146); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/3d/3ee27e0d94cf5ff84d3002b179c27b started: 1731117945452; exited: 2024-11-09T02:05:48.224491318Z; ] Nov-08 18:05:50.924 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957388; id: 21; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059147); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/38/2e08fe0b7480c3ab8e4868b777db71 started: 1731117945459; exited: 2024-11-09T02:05:46.661827207Z; ] Nov-08 18:05:50.931 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957389; id: 22; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059148); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/cf/a9804f18c42ecbbedb01fec8874c68 started: 1731117950928; exited: 2024-11-09T02:05:50.46656276Z; ] Nov-08 18:05:51.025 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957405; id: 28; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059154); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/5b/0a4cc06e2322a310146a07f2339e00 started: 1731117951023; exited: 2024-11-09T02:05:50.508323317Z; ] Nov-08 18:05:51.036 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957406; id: 30; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059156); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d1/af112d54bdce0ede720523dc5ae1a9 started: 1731117951030; exited: 2024-11-09T02:05:50.502126989Z; ] Nov-08 18:05:51.050 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957407; id: 31; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059157); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/af/4341d432aa51c360c3177afe861956 started: 1731117951046; exited: 2024-11-09T02:05:50.513765571Z; ] Nov-08 18:05:51.055 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957408; id: 32; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059158); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/8f/e54c5e7b4d13a744e03d2d1c3ba326 started: 1731117951053; exited: 2024-11-09T02:05:50.500175782Z; ] Nov-08 18:05:51.063 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957411; id: 33; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059159); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/f3/85752c60e8bc813767d080554ad6d5 started: 1731117951061; exited: 2024-11-09T02:05:50.531095319Z; ] Nov-08 18:05:51.079 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957412; id: 34; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059160); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/74/ad390fd5cadb07e2b67d792501ab7c started: 1731117951073; exited: 2024-11-09T02:05:50.507595936Z; ] Nov-08 18:05:51.098 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957413; id: 35; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059161); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/5c/5d7d99d8a921a108b11d913745ec72 started: 1731117951090; exited: 2024-11-09T02:05:50.500787415Z; ] Nov-08 18:05:51.130 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957414; id: 37; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059163); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/36/c5ee6dca8ad402c5395c45fad90a15 started: 1731117951113; exited: 2024-11-09T02:05:50.553302738Z; ] Nov-08 18:05:51.139 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957418; id: 36; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059162); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/a4/c16a7a626ca05d221549c1f561186b started: 1731117951134; exited: 2024-11-09T02:05:50.510164799Z; ] Nov-08 18:05:51.174 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957419; id: 38; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059164); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/59/2350dfbe3c90e60b3f4b7a1544ddf0 started: 1731117951153; exited: 2024-11-09T02:05:49.756755465Z; ] Nov-08 18:05:51.456 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957420; id: 40; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059166); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/12/ac4f099697fbe3656ef8eacc95d334 started: 1731117951449; exited: 2024-11-09T02:05:49.759816149Z; ] Nov-08 18:05:51.459 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856653) > jobId: 21957571; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/85/39b7e0f3bc8348df3165ee1d084d01 Nov-08 18:05:51.459 [Task submitter] INFO nextflow.Session - [85/39b7e0] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856653) Nov-08 18:05:51.471 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957421; id: 39; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059165); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/35/8fca53f88c24b1434e82fe43c6e73e started: 1731117951464; exited: 2024-11-09T02:05:49.756382499Z; ] Nov-08 18:05:51.485 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957422; id: 41; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059167); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/e6/81c2bfec03bf622b87a6783d4b55a9 started: 1731117951478; exited: 2024-11-09T02:05:49.756782729Z; ] Nov-08 18:05:51.500 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957423; id: 43; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059169); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d3/2a22b1f365d365d802dde37415fd3f started: 1731117951490; exited: 2024-11-09T02:05:49.759025366Z; ] Nov-08 18:05:51.505 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957424; id: 44; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059170); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/73/f75c478a5649fe1c35b4c4fcf969cb started: 1731117951503; exited: 2024-11-09T02:05:51.0441358Z; ] Nov-08 18:05:51.519 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957425; id: 45; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059171); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/a0/0526fa5063323bce4fdbee6a3b1328 started: 1731117951509; exited: 2024-11-09T02:05:51.148169477Z; ] Nov-08 18:05:51.620 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957436; id: 52; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059178); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/aa/960945ddb170366c44969612787e0e started: 1731117945635; exited: 2024-11-09T02:05:49.754375439Z; ] Nov-08 18:05:51.646 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957441; id: 53; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059179); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/e1/505b1cda968bfdb451682f20bc4be8 started: 1731117945661; exited: 2024-11-09T02:05:49.754884037Z; ] Nov-08 18:05:51.678 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957442; id: 54; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059180); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/00/3119b616daa598c9c09b2a4a5df669 started: 1731117945668; exited: 2024-11-09T02:05:49.754315837Z; ] Nov-08 18:05:51.700 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957443; id: 55; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059181); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/6c/25c249898712ed8ffefa995abfca37 started: 1731117951688; exited: 2024-11-09T02:05:49.998467419Z; ] Nov-08 18:05:51.719 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957445; id: 56; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059182); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/3d/655bf279e0ca55cd048c7823ea9431 started: 1731117951710; exited: 2024-11-09T02:05:49.943596604Z; ] Nov-08 18:05:51.749 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957449; id: 57; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059183); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/08/9d9c0ed885c986587e775b6d511eae started: 1731117951735; exited: 2024-11-09T02:05:50.546971244Z; ] Nov-08 18:05:51.766 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957450; id: 58; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059184); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d2/2c7fe3a041cd79f092c4298b72c347 started: 1731117951753; exited: 2024-11-09T02:05:50.558465226Z; ] Nov-08 18:05:51.841 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957457; id: 59; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059185); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/61/32c7b10b38657eef80e56a4f8986e7 started: 1731117951810; exited: 2024-11-09T02:05:50.951372783Z; ] Nov-08 18:05:52.382 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856658) > jobId: 21957572; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/60/087c780e030d34137a5fc9a80d3702 Nov-08 18:05:52.382 [Task submitter] INFO nextflow.Session - [60/087c78] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856658) Nov-08 18:05:53.360 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856657) > jobId: 21957573; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/f5/cbbcc2131e95ac74ad3405a6c1b625 Nov-08 18:05:53.361 [Task submitter] INFO nextflow.Session - [f5/cbbcc2] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856657) Nov-08 18:05:54.390 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856661) > jobId: 21957575; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/71/107792e6096c5dbe4852997b7b9f83 Nov-08 18:05:54.391 [Task submitter] INFO nextflow.Session - [71/107792] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856661) Nov-08 18:05:55.337 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957373; id: 11; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059137); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/82/7a109b9a9d1eb0d2322e6d1deeb452 started: 1731117950329; exited: 2024-11-09T02:05:51.553955992Z; ] Nov-08 18:05:55.365 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957374; id: 12; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059138); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ea/d3f88d76526b2d58d7df494d4ba01e started: 1731117945353; exited: 2024-11-09T02:05:53.336312589Z; ] Nov-08 18:05:55.392 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856662) > jobId: 21957576; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/05/b2e337c8bdc0e40f8682825e664249 Nov-08 18:05:55.392 [Task submitter] INFO nextflow.Session - [05/b2e337] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856662) Nov-08 18:05:55.430 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957375; id: 14; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059140); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d7/55387fa7c9435069938ccb312eb26b started: 1731117945378; exited: 2024-11-09T02:05:53.313535255Z; ] Nov-08 18:05:55.445 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957376; id: 13; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059139); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/07/abf06849fa66c5783d5542a0453bb7 started: 1731117950382; exited: 2024-11-09T02:05:54.564220036Z; ] Nov-08 18:05:55.454 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957377; id: 15; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059141); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/6f/9bb057418e58bed1c620b586a0d29b started: 1731117950440; exited: 2024-11-09T02:05:54.545269979Z; ] Nov-08 18:05:55.461 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957378; id: 16; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059142); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/b3/92a4398ed7a3407106fd0e760131cd started: 1731117950486; exited: 2024-11-09T02:05:54.550876881Z; ] Nov-08 18:05:55.471 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957383; id: 17; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059143); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/82/9baad391fbad21a996942b068297c4 started: 1731117945409; exited: 2024-11-09T02:05:52.709679113Z; ] Nov-08 18:05:55.476 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957384; id: 18; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059144); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/3b/4447954727fdb6b389e09b4f62c2e7 started: 1731117945426; exited: 2024-11-09T02:05:52.732299557Z; ] Nov-08 18:05:55.487 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957391; id: 23; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059149); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/55/ba997bd451fb67a77f77d3af22a4ad started: 1731117950935; exited: 2024-11-09T02:05:51.215007461Z; ] Nov-08 18:05:55.507 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957393; id: 24; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059150); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/70/a649a4d93770f6a8d0f358a0c1cf45 started: 1731117950946; exited: 2024-11-09T02:05:51.236128332Z; ] Nov-08 18:05:55.527 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957394; id: 25; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059151); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/1b/e80adf16cda0f0f7b723a52a90fb63 started: 1731117950968; exited: 2024-11-09T02:05:51.233820848Z; ] Nov-08 18:05:55.544 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957396; id: 26; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059152); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/fd/82478c8e389a1df0b4abea5e64d3ff started: 1731117950978; exited: 2024-11-09T02:05:51.233899873Z; ] Nov-08 18:05:55.572 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957399; id: 27; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059153); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/cb/c2177253c457e9907a6a099d98081e started: 1731117951003; exited: 2024-11-09T02:05:51.235959945Z; ] Nov-08 18:05:55.588 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957400; id: 29; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059155); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/2b/565f9f752b2aa73f773fa715f4665c started: 1731117951017; exited: 2024-11-09T02:05:54.207818479Z; ] Nov-08 18:05:55.597 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957426; id: 46; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059172); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/19/9f19ee460873f040aa7db31ccb7c0d started: 1731117945566; exited: 2024-11-09T02:05:53.05591708Z; ] Nov-08 18:05:55.606 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957428; id: 47; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059173); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/c6/b020ebad93c8374836c1e6d885deb8 started: 1731117951561; exited: 2024-11-09T02:05:53.052812955Z; ] Nov-08 18:05:55.623 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957429; id: 48; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059174); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/13/c49c13765f078e820030c261173d22 started: 1731117945576; exited: 2024-11-09T02:05:53.047722803Z; ] Nov-08 18:05:55.645 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957431; id: 49; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059175); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ca/5a39b29ff3765a93adc53705bc7bb3 started: 1731117951566; exited: 2024-11-09T02:05:53.164024446Z; ] Nov-08 18:05:55.669 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957434; id: 50; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059176); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/1b/abf6d202e9d582515b8ccb7bf195fb started: 1731117951571; exited: 2024-11-09T02:05:53.037423792Z; ] Nov-08 18:05:55.684 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957435; id: 51; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059177); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/50/75ccefe3124206dd2ea791aeaf2746 started: 1731117951581; exited: 2024-11-09T02:05:53.048890974Z; ] Nov-08 18:05:55.705 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957460; id: 60; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059186); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/0a/9ce2422bfa954bd76d4bec4dc0725b started: 1731117951853; exited: 2024-11-09T02:05:52.020541466Z; ] Nov-08 18:05:55.725 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957464; id: 61; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059187); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/7e/bcba5eff4afe32e08032bf726d73e7 started: 1731117951857; exited: 2024-11-09T02:05:52.020710396Z; ] Nov-08 18:05:56.360 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856663) > jobId: 21957577; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/4f/9fd4b2e90c7c4bfd8c33b866f6497f Nov-08 18:05:56.360 [Task submitter] INFO nextflow.Session - [4f/9fd4b2] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856663) Nov-08 18:05:57.362 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856664) > jobId: 21957578; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/b8/e233ab6d36d153ce221c8074f07596 Nov-08 18:05:57.362 [Task submitter] INFO nextflow.Session - [b8/e233ab] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856664) Nov-08 18:05:58.371 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856666) > jobId: 21957579; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/f3/ed6a9f05a0a44c5cec35df34be67b7 Nov-08 18:05:58.371 [Task submitter] INFO nextflow.Session - [f3/ed6a9f] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856666) Nov-08 18:05:59.362 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856665) > jobId: 21957580; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/86/e32384c8e7ed88b4c70c0658d6c2f7 Nov-08 18:05:59.363 [Task submitter] INFO nextflow.Session - [86/e32384] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856665) Nov-08 18:06:00.347 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856668) > jobId: 21957581; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ec/06d1ae809ce9bf50968873ec279369 Nov-08 18:06:00.347 [Task submitter] INFO nextflow.Session - [ec/06d1ae] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856668) Nov-08 18:06:01.370 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856667) > jobId: 21957582; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/88/3af984459510b2f3cb580f28a56bca Nov-08 18:06:01.370 [Task submitter] INFO nextflow.Session - [88/3af984] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856667) Nov-08 18:06:02.370 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856670) > jobId: 21957583; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/9a/5d673b40b16a7e48b5fcab76b04c97 Nov-08 18:06:02.371 [Task submitter] INFO nextflow.Session - [9a/5d673b] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856670) Nov-08 18:06:03.354 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856669) > jobId: 21957584; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/01/fe057d6b2229678098af01ab4b7dab Nov-08 18:06:03.354 [Task submitter] INFO nextflow.Session - [01/fe057d] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856669) Nov-08 18:06:04.363 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856672) > jobId: 21957586; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/7f/1375f94792e848e29f8939ebff3038 Nov-08 18:06:04.363 [Task submitter] INFO nextflow.Session - [7f/1375f9] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856672) Nov-08 18:06:05.358 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856671) > jobId: 21957587; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/a4/c1cc633addf5041505fb23ab9d2f7a Nov-08 18:06:05.358 [Task submitter] INFO nextflow.Session - [a4/c1cc63] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856671) Nov-08 18:06:06.361 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856673) > jobId: 21957588; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/bb/e3a6cdf61f59a9c2414059166466a0 Nov-08 18:06:06.362 [Task submitter] INFO nextflow.Session - [bb/e3a6cd] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856673) Nov-08 18:06:07.363 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856674) > jobId: 21957589; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/34/908e2900ed8fbe5a74a6453b9f6dbd Nov-08 18:06:07.363 [Task submitter] INFO nextflow.Session - [34/908e29] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856674) Nov-08 18:06:08.454 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856675) > jobId: 21957590; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/41/37585f3da55b28b697518d905918c0 Nov-08 18:06:08.454 [Task submitter] INFO nextflow.Session - [41/37585f] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856675) Nov-08 18:06:09.363 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856676) > jobId: 21957591; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/04/ddbd3e9ddf1d999a9b1e5ddbdf549d Nov-08 18:06:09.364 [Task submitter] INFO nextflow.Session - [04/ddbd3e] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856676) Nov-08 18:06:10.374 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856678) > jobId: 21957592; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ea/8111c40b42c4793e80ecaa832df2c5 Nov-08 18:06:10.374 [Task submitter] INFO nextflow.Session - [ea/8111c4] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856678) Nov-08 18:06:11.366 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856677) > jobId: 21957593; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/11/f910ddf0653778bcb56d79ed503c21 Nov-08 18:06:11.366 [Task submitter] INFO nextflow.Session - [11/f910dd] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856677) Nov-08 18:06:12.376 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856680) > jobId: 21957594; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/19/40da99d8c59f87fcfad5be5fca8d84 Nov-08 18:06:12.376 [Task submitter] INFO nextflow.Session - [19/40da99] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856680) Nov-08 18:06:14.667 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856679) > jobId: 21957595; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/01/e7fbab91fa76e1357d119fb5cc798a Nov-08 18:06:14.667 [Task submitter] INFO nextflow.Session - [01/e7fbab] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856679) Nov-08 18:06:14.765 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856681) > jobId: 21957596; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/13/64edfdd39d27027a8d32a875379af5 Nov-08 18:06:14.765 [Task submitter] INFO nextflow.Session - [13/64edfd] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856681) Nov-08 18:06:17.202 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856682) > jobId: 21957597; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/9f/e24b6b7a649b700d15d07d72b99f46 Nov-08 18:06:17.202 [Task submitter] INFO nextflow.Session - [9f/e24b6b] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856682) Nov-08 18:06:17.309 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856684) > jobId: 21957598; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d3/4a7da61caf732f585f136d856fe6c0 Nov-08 18:06:17.309 [Task submitter] INFO nextflow.Session - [d3/4a7da6] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856684) Nov-08 18:06:17.398 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856683) > jobId: 21957599; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/f1/ff7d283e5fc26dba1ffd4f75266ac8 Nov-08 18:06:17.398 [Task submitter] INFO nextflow.Session - [f1/ff7d28] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856683) Nov-08 18:06:19.764 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856655) > jobId: 21957600; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/fd/e18f160febf1d7673736c608a2b2c3 Nov-08 18:06:19.765 [Task submitter] INFO nextflow.Session - [fd/e18f16] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856655) Nov-08 18:06:19.866 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856685) > jobId: 21957601; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/61/168114ae70207e1c500b199a6a3705 Nov-08 18:06:19.866 [Task submitter] INFO nextflow.Session - [61/168114] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856685) Nov-08 18:06:20.955 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856659) > jobId: 21957602; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d6/420d335f8a587157c861897dcb6272 Nov-08 18:06:20.955 [Task submitter] INFO nextflow.Session - [d6/420d33] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856659) Nov-08 18:06:21.349 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856656) > jobId: 21957603; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/19/86f7949059c1ee40bd8e3a8a37e835 Nov-08 18:06:21.350 [Task submitter] INFO nextflow.Session - [19/86f794] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856656) Nov-08 18:06:22.432 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856660) > jobId: 21957604; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/51/b54cb70549bd9fdd214a33ecd3470d Nov-08 18:06:22.432 [Task submitter] INFO nextflow.Session - [51/b54cb7] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856660) Nov-08 18:06:23.376 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430566) > jobId: 21957605; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/c5/bb3b9e5d7652746bb81d2f660279dd Nov-08 18:06:23.376 [Task submitter] INFO nextflow.Session - [c5/bb3b9e] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430566) Nov-08 18:06:24.363 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430568) > jobId: 21957610; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/8c/a9dd9bd32ec8c03e4bbe19ae5a2b34 Nov-08 18:06:24.364 [Task submitter] INFO nextflow.Session - [8c/a9dd9b] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430568) Nov-08 18:06:25.359 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430567) > jobId: 21957611; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/45/48f2ce9d8b0ebc3568ade67e60e1b4 Nov-08 18:06:25.359 [Task submitter] INFO nextflow.Session - [45/48f2ce] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430567) Nov-08 18:06:26.386 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430569) > jobId: 21957614; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/a4/091e1e2f4bbc5c1cf66055429a7ac1 Nov-08 18:06:26.387 [Task submitter] INFO nextflow.Session - [a4/091e1e] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430569) Nov-08 18:06:27.354 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430570) > jobId: 21957615; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/96/d7bef608a1f99ca9dec9c549dd426c Nov-08 18:06:27.354 [Task submitter] INFO nextflow.Session - [96/d7bef6] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430570) Nov-08 18:06:28.368 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430586) > jobId: 21957616; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/96/ed04445ef3195bef372e61bc966638 Nov-08 18:06:28.368 [Task submitter] INFO nextflow.Session - [96/ed0444] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430586) Nov-08 18:06:29.370 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430575) > jobId: 21957617; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ae/86999f4ed31180a97fad313cc97bf0 Nov-08 18:06:29.371 [Task submitter] INFO nextflow.Session - [ae/86999f] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430575) Nov-08 18:06:30.384 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430597) > jobId: 21957618; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/08/ab388bd009339bb7f498102be82ce2 Nov-08 18:06:30.384 [Task submitter] INFO nextflow.Session - [08/ab388b] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430597) Nov-08 18:06:31.382 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430598) > jobId: 21957623; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/72/5d41a82a586b8c727d67db4f64e02a Nov-08 18:06:31.382 [Task submitter] INFO nextflow.Session - [72/5d41a8] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430598) Nov-08 18:06:32.349 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430600) > jobId: 21957624; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/f6/9021eab7fa2ced5e9da75d1e6c9422 Nov-08 18:06:32.349 [Task submitter] INFO nextflow.Session - [f6/9021ea] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430600) Nov-08 18:06:33.361 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430599) > jobId: 21957626; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/f8/441e287df7ca4d1c11414f192a42e5 Nov-08 18:06:33.361 [Task submitter] INFO nextflow.Session - [f8/441e28] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430599) Nov-08 18:06:34.385 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430601) > jobId: 21957629; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/e8/afcaadbcd22cbe3d54d0ef2899976b Nov-08 18:06:34.385 [Task submitter] INFO nextflow.Session - [e8/afcaad] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430601) Nov-08 18:06:35.393 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430602) > jobId: 21957630; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/f2/25fc60c1caf8fded3214d97c72b5f7 Nov-08 18:06:35.393 [Task submitter] INFO nextflow.Session - [f2/25fc60] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430602) Nov-08 18:06:36.364 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430604) > jobId: 21957632; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/e6/3cf7bb55b1cd51ae3715f2a0723710 Nov-08 18:06:36.364 [Task submitter] INFO nextflow.Session - [e6/3cf7bb] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430604) Nov-08 18:06:37.360 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430603) > jobId: 21957633; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/b5/6d6abe827aa1a77b32a9d128c93771 Nov-08 18:06:37.360 [Task submitter] INFO nextflow.Session - [b5/6d6abe] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430603) Nov-08 18:06:38.358 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430605) > jobId: 21957634; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/5b/763a6b19ba172902e3fc5cf99659a9 Nov-08 18:06:38.358 [Task submitter] INFO nextflow.Session - [5b/763a6b] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430605) Nov-08 18:06:39.351 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430606) > jobId: 21957636; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/05/1e8b98ee8123b8b41ac452cd0e207f Nov-08 18:06:39.351 [Task submitter] INFO nextflow.Session - [05/1e8b98] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430606) Nov-08 18:06:40.423 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430607) > jobId: 21957640; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/cb/24d8ea60c50685180f02c51fb7c51f Nov-08 18:06:40.423 [Task submitter] INFO nextflow.Session - [cb/24d8ea] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430607) Nov-08 18:07:45.392 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957473; id: 69; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995880); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/62/9f1b0ae891675f2506746076b29413 started: 1731118060383; exited: 2024-11-09T02:07:41.178781829Z; ] Nov-08 18:07:45.398 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957474; id: 70; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995881); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/b9/3cbc69921f81d6fafede63c8065b2c started: 1731118060387; exited: 2024-11-09T02:07:41.179007425Z; ] Nov-08 18:07:45.404 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957475; id: 71; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995882); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/cc/17d6266b867c510ad9804896ae2c7e started: 1731118060392; exited: 2024-11-09T02:07:42.962743704Z; ] Nov-08 18:07:45.408 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957476; id: 72; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995883); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/84/627f6fa939b46dd477e5a618833b3c started: 1731118060395; exited: 2024-11-09T02:07:42.96275118Z; ] Nov-08 18:07:45.417 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957477; id: 73; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995884); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/90/0a7bdd688e7c8707b75ad0712c91df started: 1731118060403; exited: 2024-11-09T02:07:44.194852808Z; ] Nov-08 18:07:45.444 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957480; id: 42; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR22059168); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/f3/06949447beec6d7b9ea1a276f94331 started: 1731118060414; exited: 2024-11-09T02:07:41.593496811Z; ] Nov-08 18:07:45.461 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957482; id: 75; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995886); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/20/a3ee2f624ade7eb9dfdd2a8b02e3b3 started: 1731118060426; exited: 2024-11-09T02:07:41.471634288Z; ] Nov-08 18:07:45.469 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957485; id: 76; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995887); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/8e/7bab6dc55a72a1e0566aefed35e9fb started: 1731118060431; exited: 2024-11-09T02:07:41.588604035Z; ] Nov-08 18:07:45.473 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957486; id: 77; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995888); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/af/be821e25694a6cf654e94744cfa828 started: 1731118060436; exited: 2024-11-09T02:07:41.615244947Z; ] Nov-08 18:07:45.480 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957488; id: 78; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995889); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/98/239b8b7c7e0a401d21a03f68938800 started: 1731118060441; exited: 2024-11-09T02:07:41.614263573Z; ] Nov-08 18:07:45.496 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957495; id: 79; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995890); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/29/02c56e2b56dd95203e7830f75c4b6c started: 1731118060454; exited: 2024-11-09T02:07:41.312924317Z; ] Nov-08 18:07:45.502 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957496; id: 81; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995892); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ba/a8aee6dcd5973a0b30430273767179 started: 1731118060463; exited: 2024-11-09T02:07:41.398461089Z; ] Nov-08 18:07:45.514 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957497; id: 82; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995893); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/16/0de2df1e34bf8342ebd417a4c07e45 started: 1731118060467; exited: 2024-11-09T02:07:41.356813663Z; ] Nov-08 18:07:45.532 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957499; id: 84; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995895); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/aa/8c6b1f748401b8c460b1bc3604a275 started: 1731118060471; exited: 2024-11-09T02:07:41.324651999Z; ] Nov-08 18:07:45.549 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957500; id: 83; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995894); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/b7/3d9ef1bf7f1b343c71bbe4289f0e3e started: 1731118060475; exited: 2024-11-09T02:07:41.312675564Z; ] Nov-08 18:07:45.562 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957501; id: 86; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995897); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/3b/de85ccb30781e3e00d6a1b46f25870 started: 1731118060478; exited: 2024-11-09T02:07:41.335040531Z; ] Nov-08 18:07:45.573 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957502; id: 85; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995896); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/9d/6c4e1ed2bce5d499df6c311d7c6497 started: 1731118060482; exited: 2024-11-09T02:07:41.397878377Z; ] Nov-08 18:07:45.596 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957503; id: 87; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995898); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/99/652c2307e95a9631ee2b180d0a41e7 started: 1731118060489; exited: 2024-11-09T02:07:41.662337084Z; ] Nov-08 18:07:45.620 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957504; id: 88; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995899); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/52/beb73f918a0303d69c234463ff311a started: 1731118060497; exited: 2024-11-09T02:07:41.327526576Z; ] Nov-08 18:07:45.639 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957505; id: 89; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995900); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/65/1e40779af16f26451fbce5633a4d2a started: 1731118060501; exited: 2024-11-09T02:07:43.3826683Z; ] Nov-08 18:07:45.648 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957506; id: 90; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995901); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/27/7cf4001f74568ee3fd8c8709806b81 started: 1731118060506; exited: 2024-11-09T02:07:43.345311231Z; ] Nov-08 18:07:45.665 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957507; id: 92; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995903); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/65/ffc5871a0797ca166f08038fd6791e started: 1731118060511; exited: 2024-11-09T02:07:43.351603846Z; ] Nov-08 18:07:45.680 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957508; id: 91; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995902); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/7f/f5d10e7f992e0dfb32c80361c9b47d started: 1731118060515; exited: 2024-11-09T02:07:43.369577284Z; ] Nov-08 18:07:45.703 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957514; id: 93; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995904); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/3a/6d82a945fb87fc5a228b31cb9d98c5 started: 1731118060524; exited: 2024-11-09T02:07:43.382736473Z; ] Nov-08 18:07:45.729 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957517; id: 96; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995907); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/56/f751fdef3a7ce1bf2bb73b1540c71a started: 1731118060553; exited: 2024-11-09T02:07:45.389653361Z; ] Nov-08 18:07:45.753 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957518; id: 95; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995906); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/57/6881120637eed8cd976f64a74b29c5 started: 1731118060558; exited: 2024-11-09T02:07:45.077939639Z; ] Nov-08 18:07:45.762 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957519; id: 98; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995909); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/37/343e2bce8380a6d73cf6132f6e6467 started: 1731118060572; exited: 2024-11-09T02:07:44.959206726Z; ] Nov-08 18:07:45.781 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957522; id: 100; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995911); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d8/e61128d50ee84c8ee5045fcd83a159 started: 1731118060602; exited: 2024-11-09T02:07:44.965474647Z; ] Nov-08 18:07:45.792 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957523; id: 99; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995910); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/47/729b2c16805502c73be145e8756005 started: 1731118060614; exited: 2024-11-09T02:07:44.94507767Z; ] Nov-08 18:07:45.801 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957524; id: 101; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995912); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/e4/9c32e8579ccfc6f5f50d42d8ca0767 started: 1731118060641; exited: 2024-11-09T02:07:44.962644795Z; ] Nov-08 18:07:45.809 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957525; id: 102; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993892); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/41/1d7f212344e3296f7bb563a4ad6280 started: 1731118060647; exited: 2024-11-09T02:07:41.535276717Z; ] Nov-08 18:07:45.817 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957526; id: 103; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993893); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/a6/ff0e753924474a38de8ccce978b7c7 started: 1731118060653; exited: 2024-11-09T02:07:41.52967927Z; ] Nov-08 18:07:45.832 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957532; id: 104; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993894); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/2c/8a432cb79c6112bcb1af5daa30bf58 started: 1731118060658; exited: 2024-11-09T02:07:41.524970461Z; ] Nov-08 18:07:45.838 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957533; id: 105; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993895); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/56/2d20d07f81fe41fd8997b0a35693e0 started: 1731118060668; exited: 2024-11-09T02:07:41.552622534Z; ] Nov-08 18:07:45.847 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957534; id: 106; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993896); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ee/864a6d9c46440db3a5b65d044ebe90 started: 1731118060677; exited: 2024-11-09T02:07:41.519578267Z; ] Nov-08 18:07:45.876 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957542; id: 109; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993899); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/5d/c338ef5c186530424e7da293c954d2 started: 1731118065861; exited: 2024-11-09T02:07:44.368252679Z; ] Nov-08 18:07:46.356 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (40) > jobId: 21957671; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/55/dcea5b33ac60eac18385acb31bbf8c Nov-08 18:07:46.356 [Task submitter] INFO nextflow.Session - [55/dcea5b] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (40) Nov-08 18:07:47.389 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (41) > jobId: 21957672; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d3/81fed9f861e7d20a704f0b7892d975 Nov-08 18:07:47.390 [Task submitter] INFO nextflow.Session - [d3/81fed9] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (41) Nov-08 18:07:48.361 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (42) > jobId: 21957674; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/67/bd96a5cce81e817ede9e83e3566840 Nov-08 18:07:48.362 [Task submitter] INFO nextflow.Session - [67/bd96a5] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (42) Nov-08 18:07:49.376 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (43) > jobId: 21957677; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/08/89cfcd232920eb2b388670d456d199 Nov-08 18:07:49.376 [Task submitter] INFO nextflow.Session - [08/89cfcd] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (43) Nov-08 18:07:50.350 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (44) > jobId: 21957680; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ca/c902eca34ff71575822791975f477d Nov-08 18:07:50.350 [Task submitter] INFO nextflow.Session - [ca/c902ec] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (44) Nov-08 18:07:50.359 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957467; id: 64; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995875); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/f0/e35d3e545ffc5abe3b1645e498a14f started: 1731118065354; exited: 2024-11-09T02:07:46.518827296Z; ] Nov-08 18:07:50.404 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957468; id: 65; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995876); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/64/c1f4429cb68e6e9d1134cc9f77897b started: 1731118060345; exited: 2024-11-09T02:07:46.598998816Z; ] Nov-08 18:07:50.448 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957469; id: 66; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995877); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/60/7e51a32da5f79853e7cb54518d9afa started: 1731118065357; exited: 2024-11-09T02:07:46.501434291Z; ] Nov-08 18:07:50.501 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957470; id: 67; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995878); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/6c/108e7dcfee8da0d7ebca90d89985d3 started: 1731118065368; exited: 2024-11-09T02:07:47.83013177Z; ] Nov-08 18:07:50.566 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957472; id: 68; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995879); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/df/e42fe6d13c19310e6db6227c59d3a8 started: 1731118065379; exited: 2024-11-09T02:07:46.613119424Z; ] Nov-08 18:07:50.573 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957515; id: 94; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995905); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/53/6dfe8116688453be60b643e9f4f13a started: 1731118060546; exited: 2024-11-09T02:07:46.501975505Z; ] Nov-08 18:07:50.582 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957535; id: 107; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993897); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/b5/e375015032d29a32ddde16d2e584c7 started: 1731118060681; exited: 2024-11-09T02:07:46.8998188Z; ] Nov-08 18:07:51.386 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (45) > jobId: 21957686; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/7b/018c23f9b1b3c3fc1fb5391a315f03 Nov-08 18:07:51.386 [Task submitter] INFO nextflow.Session - [7b/018c23] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (45) Nov-08 18:07:52.368 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (46) > jobId: 21957689; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/86/fc84c33dd1f848d3a80185d421cdb6 Nov-08 18:07:52.368 [Task submitter] INFO nextflow.Session - [86/fc84c3] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (46) Nov-08 18:07:53.370 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (48) > jobId: 21957690; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/64/3f6de27c8b9439884b7933f559deab Nov-08 18:07:53.370 [Task submitter] INFO nextflow.Session - [64/3f6de2] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (48) Nov-08 18:07:54.365 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (49) > jobId: 21957691; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/fa/c654ba70285c130f33be3dd44fbf4e Nov-08 18:07:54.366 [Task submitter] INFO nextflow.Session - [fa/c654ba] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (49) Nov-08 18:07:55.341 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957465; id: 62; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995873); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/3c/bf01a8128c909d640e5558387b86c5 started: 1731118065340; exited: 2024-11-09T02:07:55.106928448Z; ] Nov-08 18:07:55.350 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957466; id: 63; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995874); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/b6/440b8b39399b780bd78ae123af8ec6 started: 1731118065348; exited: 2024-11-09T02:07:55.106780065Z; ] Nov-08 18:07:55.396 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (47) > jobId: 21957692; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/bb/46c2a1484ae9c495b212634df3921e Nov-08 18:07:55.396 [Task submitter] INFO nextflow.Session - [bb/46c2a1] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (47) Nov-08 18:07:56.363 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (50) > jobId: 21957693; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/33/9a7b93a0d316f02af5f4a0c496cd0e Nov-08 18:07:56.363 [Task submitter] INFO nextflow.Session - [33/9a7b93] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (50) Nov-08 18:07:57.358 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (51) > jobId: 21957694; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/be/c31796d197eceb9cc23b96996970ed Nov-08 18:07:57.358 [Task submitter] INFO nextflow.Session - [be/c31796] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (51) Nov-08 18:07:58.348 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (53) > jobId: 21957695; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/a4/bb9b40583f3971c8318110f995c73c Nov-08 18:07:58.348 [Task submitter] INFO nextflow.Session - [a4/bb9b40] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (53) Nov-08 18:07:59.364 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (52) > jobId: 21957696; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/62/80ed0a9bf40c95686914407d280213 Nov-08 18:07:59.364 [Task submitter] INFO nextflow.Session - [62/80ed0a] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (52) Nov-08 18:08:00.341 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957479; id: 74; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995885); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/f6/71ccd1b17932dd7cda3d5a89ec5a24 started: 1731118065430; exited: 2024-11-09T02:07:59.086334396Z; ] Nov-08 18:08:00.349 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957521; id: 97; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995908); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/4c/b7a814bab79cfba3bb9f5370db1acd started: 1731118060595; exited: 2024-11-09T02:07:55.755507876Z; ] Nov-08 18:08:00.354 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957540; id: 108; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993898); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/94/637c413472eedc29300b592d18f2a7 started: 1731118065851; exited: 2024-11-09T02:07:56.670232397Z; ] Nov-08 18:08:00.356 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (54) > jobId: 21957697; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/57/24c04c0d8e03289ce7b2b54aeafa65 Nov-08 18:08:00.356 [Task submitter] INFO nextflow.Session - [57/24c04c] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (54) Nov-08 18:08:01.392 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (55) > jobId: 21957704; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/60/a9b4575b4ae182b22ce6858bb3803e Nov-08 18:08:01.392 [Task submitter] INFO nextflow.Session - [60/a9b457] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (55) Nov-08 18:08:02.355 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (56) > jobId: 21957705; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/78/8586b2bdde30e2b058648d1f2b7f2d Nov-08 18:08:02.355 [Task submitter] INFO nextflow.Session - [78/8586b2] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (56) Nov-08 18:08:03.352 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (58) > jobId: 21957706; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/4f/c95fa85d76fdbffd3fdc33daa4f5b1 Nov-08 18:08:03.352 [Task submitter] INFO nextflow.Session - [4f/c95fa8] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (58) Nov-08 18:08:04.368 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (57) > jobId: 21957707; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/0d/6c5a1ba4c1d6b84db683a603a37c4c Nov-08 18:08:04.369 [Task submitter] INFO nextflow.Session - [0d/6c5a1b] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (57) Nov-08 18:08:05.347 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957489; id: 80; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10995891); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/e0/468cfc4bf469b0dc030c5b85bb40de started: 1731118060447; exited: 2024-11-09T02:08:02.119977685Z; ] Nov-08 18:08:05.352 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957541; id: 110; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993900); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d7/295d8a76e2ad270eb898797b6876e4 started: 1731118060697; exited: 2024-11-09T02:08:03.487775426Z; ] Nov-08 18:08:05.369 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (59) > jobId: 21957711; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/9f/edbeb3a8b236b0ddc686b39708bb73 Nov-08 18:08:05.369 [Task submitter] INFO nextflow.Session - [9f/edbeb3] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (59) Nov-08 18:08:06.373 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (60) > jobId: 21957712; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/36/1d76b19d55fcfb4f4e7ff844ec15a5 Nov-08 18:08:06.373 [Task submitter] INFO nextflow.Session - [36/1d76b1] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (60) Nov-08 18:08:07.383 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (61) > jobId: 21957714; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/5c/b5e81bee10384db0963c3584bc1fcb Nov-08 18:08:07.383 [Task submitter] INFO nextflow.Session - [5c/b5e81b] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (61) Nov-08 18:08:09.540 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (63) > jobId: 21957715; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/5a/90505e3621360dc07520630d2d1555 Nov-08 18:08:09.540 [Task submitter] INFO nextflow.Session - [5a/90505e] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (63) Nov-08 18:08:09.619 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (62) > jobId: 21957716; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/2f/8d45936b7a0d41aaeb3eaed4216080 Nov-08 18:08:09.620 [Task submitter] INFO nextflow.Session - [2f/8d4593] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (62) Nov-08 18:08:12.041 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (64) > jobId: 21957717; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/10/455303d077861977ec641f8fac0b54 Nov-08 18:08:12.041 [Task submitter] INFO nextflow.Session - [10/455303] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (64) Nov-08 18:08:12.129 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (65) > jobId: 21957721; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/82/7414d281028d00acee5ffb9461bdc5 Nov-08 18:08:12.129 [Task submitter] INFO nextflow.Session - [82/7414d2] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (65) Nov-08 18:08:12.360 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (67) > jobId: 21957722; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/8c/c96166a7aea4abd255f7c795c328f6 Nov-08 18:08:12.360 [Task submitter] INFO nextflow.Session - [8c/c96166] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (67) Nov-08 18:08:14.407 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (66) > jobId: 21957723; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/cc/582771a0495a60e9f266ac88c95f8a Nov-08 18:08:14.407 [Task submitter] INFO nextflow.Session - [cc/582771] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (66) Nov-08 18:08:14.551 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (68) > jobId: 21957725; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/b3/4c35b199df2b3576f5ca0172811cff Nov-08 18:08:14.551 [Task submitter] INFO nextflow.Session - [b3/4c35b1] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (68) Nov-08 18:08:15.379 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (69) > jobId: 21957729; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ab/c681a090dbee3f6a1065e3f0f5fc29 Nov-08 18:08:15.379 [Task submitter] INFO nextflow.Session - [ab/c681a0] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (69) Nov-08 18:08:16.362 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (70) > jobId: 21957731; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/53/6e16f1fce1ccddfdbd14ce2a5f172b Nov-08 18:08:16.363 [Task submitter] INFO nextflow.Session - [53/6e16f1] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (70) Nov-08 18:08:17.363 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (71) > jobId: 21957734; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/6e/78b06f923d712084ed9fa5ea8ecbc0 Nov-08 18:08:17.363 [Task submitter] INFO nextflow.Session - [6e/78b06f] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (71) Nov-08 18:08:18.351 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (72) > jobId: 21957735; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/3a/da6b0886a9f89dd65478abb6fb1fad Nov-08 18:08:18.351 [Task submitter] INFO nextflow.Session - [3a/da6b08] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (72) Nov-08 18:08:19.357 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (73) > jobId: 21957739; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/84/6f4e11a352eb519219da5512f6a6ad Nov-08 18:08:19.357 [Task submitter] INFO nextflow.Session - [84/6f4e11] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (73) Nov-08 18:08:20.593 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (75) > jobId: 21957740; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d5/089a8e97ccdabfd9afb3b3ca2c9470 Nov-08 18:08:20.593 [Task submitter] INFO nextflow.Session - [d5/089a8e] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (75) Nov-08 18:08:20.926 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > No more task to compute -- The following nodes are still active: [process] NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP status=ACTIVE port 0: (queue) OPEN ; channel: runinfo port 1: (cntrl) - ; channel: $ [process] NFCORE_FETCHNGS:SRA:SRA_FASTQ_FTP status=ACTIVE port 0: (queue) OPEN ; channel: - port 1: (cntrl) - ; channel: $ [process] NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:CUSTOM_SRATOOLSNCBISETTINGS status=ACTIVE port 0: (value) OPEN ; channel: ids port 1: (cntrl) - ; channel: $ [process] NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH status=ACTIVE port 0: (queue) OPEN ; channel: - port 1: (value) OPEN ; channel: ncbi_settings port 2: (value) bound ; channel: certificate port 3: (cntrl) - ; channel: $ [process] NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP status=ACTIVE port 0: (queue) OPEN ; channel: - port 1: (value) OPEN ; channel: ncbi_settings port 2: (value) bound ; channel: certificate port 3: (cntrl) - ; channel: $ [process] NFCORE_FETCHNGS:SRA:ASPERA_CLI status=ACTIVE port 0: (queue) OPEN ; channel: - port 1: (value) bound ; channel: user port 2: (cntrl) - ; channel: $ [process] NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET status=ACTIVE port 0: (queue) OPEN ; channel: meta port 1: (value) bound ; channel: pipeline port 2: (value) bound ; channel: strandedness port 3: (value) bound ; channel: mapping_fields port 4: (cntrl) - ; channel: $ [process] NFCORE_FETCHNGS:SRA:MULTIQC_MAPPINGS_CONFIG status=ACTIVE port 0: (queue) OPEN ; channel: csv port 1: (cntrl) - ; channel: $ Nov-08 18:08:21.371 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (74) > jobId: 21957747; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/b5/32cb16db4ddc461c3d40f0cf5fc254 Nov-08 18:08:21.372 [Task submitter] INFO nextflow.Session - [b5/32cb16] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (74) Nov-08 18:08:22.378 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (77) > jobId: 21957748; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/e7/70916d826ae62f40be512f5ff67309 Nov-08 18:08:22.378 [Task submitter] INFO nextflow.Session - [e7/70916d] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (77) Nov-08 18:08:23.365 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (76) > jobId: 21957749; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/45/542af4e293405fcaf75a42069d721a Nov-08 18:08:23.366 [Task submitter] INFO nextflow.Session - [45/542af4] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (76) Nov-08 18:08:24.361 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (78) > jobId: 21957750; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/3c/ab087cae791124be5e29c271ed9a3c Nov-08 18:08:24.361 [Task submitter] INFO nextflow.Session - [3c/ab087c] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (78) Nov-08 18:08:25.340 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor slurm > tasks to be completed: 89 -- submitted tasks are shown below ~> TaskHandler[jobId: 21957571; id: 145; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856653); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/85/39b7e0f3bc8348df3165ee1d084d01 started: 1731118100340; exited: -; ] ~> TaskHandler[jobId: 21957572; id: 148; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856658); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/60/087c780e030d34137a5fc9a80d3702 started: 1731118100348; exited: -; ] ~> TaskHandler[jobId: 21957573; id: 147; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856657); status: SUBMITTED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/f5/cbbcc2131e95ac74ad3405a6c1b625 started: -; exited: -; ] ~> TaskHandler[jobId: 21957575; id: 149; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856661); status: SUBMITTED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/71/107792e6096c5dbe4852997b7b9f83 started: -; exited: -; ] ~> TaskHandler[jobId: 21957576; id: 150; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856662); status: SUBMITTED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/05/b2e337c8bdc0e40f8682825e664249 started: -; exited: -; ] ~> TaskHandler[jobId: 21957577; id: 151; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856663); status: SUBMITTED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/4f/9fd4b2e90c7c4bfd8c33b866f6497f started: -; exited: -; ] ~> TaskHandler[jobId: 21957578; id: 152; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856664); status: SUBMITTED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/b8/e233ab6d36d153ce221c8074f07596 started: -; exited: -; ] ~> TaskHandler[jobId: 21957579; id: 154; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856666); status: SUBMITTED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/f3/ed6a9f05a0a44c5cec35df34be67b7 started: -; exited: -; ] ~> TaskHandler[jobId: 21957580; id: 153; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856665); status: SUBMITTED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/86/e32384c8e7ed88b4c70c0658d6c2f7 started: -; exited: -; ] ~> TaskHandler[jobId: 21957581; id: 156; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856668); status: SUBMITTED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ec/06d1ae809ce9bf50968873ec279369 started: -; exited: -; ] .. remaining tasks omitted. Nov-08 18:08:25.365 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (79) > jobId: 21957754; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/35/e79fc6935314e7176a2c5624df9ad0 Nov-08 18:08:25.365 [Task submitter] INFO nextflow.Session - [35/e79fc6] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (79) Nov-08 18:08:26.363 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (81) > jobId: 21957755; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/9f/4a5ab3afaba9ed04fce2ac477598fc Nov-08 18:08:26.363 [Task submitter] INFO nextflow.Session - [9f/4a5ab3] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (81) Nov-08 18:08:27.379 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (80) > jobId: 21957756; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d2/39ab4d9c63e64d4ec57ce32552d9df Nov-08 18:08:27.379 [Task submitter] INFO nextflow.Session - [d2/39ab4d] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (80) Nov-08 18:08:28.374 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (82) > jobId: 21957757; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d2/c3d2858ed876a6b0f5b5e160412976 Nov-08 18:08:28.375 [Task submitter] INFO nextflow.Session - [d2/c3d285] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (82) Nov-08 18:08:29.360 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (83) > jobId: 21957758; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/6f/05bd5a26ef5950d41574ae603ab50f Nov-08 18:08:29.360 [Task submitter] INFO nextflow.Session - [6f/05bd5a] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (83) Nov-08 18:08:30.385 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (84) > jobId: 21957759; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/e6/aa2b07ecb320708c5d845fda81f9fe Nov-08 18:08:30.385 [Task submitter] INFO nextflow.Session - [e6/aa2b07] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (84) Nov-08 18:08:30.430 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957572; id: 148; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856658); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/60/087c780e030d34137a5fc9a80d3702 started: 1731118100348; exited: 2024-11-09T02:08:27.355660122Z; ] Nov-08 18:08:31.354 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (85) > jobId: 21957760; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/48/4b73643abd39d469b40255e76b400a Nov-08 18:08:31.354 [Task submitter] INFO nextflow.Session - [48/4b7364] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (85) Nov-08 18:08:32.362 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (87) > jobId: 21957761; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/3f/c40c8862e23ae9d6b4bb44a62e6bfb Nov-08 18:08:32.362 [Task submitter] INFO nextflow.Session - [3f/c40c88] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (87) Nov-08 18:08:33.364 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (86) > jobId: 21957763; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ed/d858c0f640d18a264726a718b93a74 Nov-08 18:08:33.365 [Task submitter] INFO nextflow.Session - [ed/d858c0] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (86) Nov-08 18:08:34.394 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (88) > jobId: 21957766; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/a7/089be65db3e1e3920c0bd6e2683ff1 Nov-08 18:08:34.394 [Task submitter] INFO nextflow.Session - [a7/089be6] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (88) Nov-08 18:08:35.368 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (89) > jobId: 21957767; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/91/b958ddcc1bf76b938018b45a68cc2b Nov-08 18:08:35.368 [Task submitter] INFO nextflow.Session - [91/b958dd] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (89) Nov-08 18:08:36.351 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (90) > jobId: 21957768; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d4/608e43af0ce5f72f8e0e4a0a7dce8d Nov-08 18:08:36.351 [Task submitter] INFO nextflow.Session - [d4/608e43] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (90) Nov-08 18:08:40.348 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957571; id: 145; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856653); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/85/39b7e0f3bc8348df3165ee1d084d01 started: 1731118100340; exited: 2024-11-09T02:08:35.447451628Z; ] Nov-08 18:08:41.350 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (95) > jobId: 21957769; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/10/0129e708519c79cf9451cf73878929 Nov-08 18:08:41.350 [Task submitter] INFO nextflow.Session - [10/0129e7] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (95) Nov-08 18:10:25.390 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957575; id: 149; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856661); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/71/107792e6096c5dbe4852997b7b9f83 started: 1731118225377; exited: 2024-11-09T02:10:24.13435114Z; ] Nov-08 18:10:25.412 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957576; id: 150; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856662); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/05/b2e337c8bdc0e40f8682825e664249 started: 1731118225403; exited: 2024-11-09T02:10:24.047232061Z; ] Nov-08 18:10:25.454 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957577; id: 151; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856663); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/4f/9fd4b2e90c7c4bfd8c33b866f6497f started: 1731118225443; exited: 2024-11-09T02:10:24.002250914Z; ] Nov-08 18:10:25.490 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957578; id: 152; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856664); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/b8/e233ab6d36d153ce221c8074f07596 started: 1731118225470; exited: 2024-11-09T02:10:23.893502002Z; ] Nov-08 18:10:25.498 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957579; id: 154; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856666); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/f3/ed6a9f05a0a44c5cec35df34be67b7 started: 1731118225492; exited: 2024-11-09T02:10:23.862220839Z; ] Nov-08 18:10:25.509 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957580; id: 153; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856665); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/86/e32384c8e7ed88b4c70c0658d6c2f7 started: 1731118220363; exited: 2024-11-09T02:10:21.174345929Z; ] Nov-08 18:10:25.520 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957581; id: 156; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856668); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ec/06d1ae809ce9bf50968873ec279369 started: 1731118220371; exited: 2024-11-09T02:10:21.180330555Z; ] Nov-08 18:10:25.540 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957582; id: 155; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856667); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/88/3af984459510b2f3cb580f28a56bca started: 1731118220385; exited: 2024-11-09T02:10:21.655236711Z; ] Nov-08 18:10:25.546 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957583; id: 158; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856670); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/9a/5d673b40b16a7e48b5fcab76b04c97 started: 1731118220418; exited: 2024-11-09T02:10:21.616482938Z; ] Nov-08 18:10:25.554 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957584; id: 157; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856669); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/01/fe057d6b2229678098af01ab4b7dab started: 1731118220451; exited: 2024-11-09T02:10:21.633747207Z; ] Nov-08 18:10:25.590 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957587; id: 159; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856671); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/a4/c1cc633addf5041505fb23ab9d2f7a started: 1731118225583; exited: 2024-11-09T02:10:24.878676431Z; ] Nov-08 18:10:25.606 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957588; id: 161; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856673); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/bb/e3a6cdf61f59a9c2414059166466a0 started: 1731118225597; exited: 2024-11-09T02:10:25.02476813Z; ] Nov-08 18:10:25.633 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957589; id: 162; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856674); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/34/908e2900ed8fbe5a74a6453b9f6dbd started: 1731118220481; exited: 2024-11-09T02:10:24.451383079Z; ] Nov-08 18:10:25.645 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957590; id: 163; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856675); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/41/37585f3da55b28b697518d905918c0 started: 1731118220489; exited: 2024-11-09T02:10:24.464543035Z; ] Nov-08 18:10:25.649 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957591; id: 164; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856676); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/04/ddbd3e9ddf1d999a9b1e5ddbdf549d started: 1731118220497; exited: 2024-11-09T02:10:24.316940532Z; ] Nov-08 18:10:25.666 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957592; id: 166; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856678); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ea/8111c40b42c4793e80ecaa832df2c5 started: 1731118220503; exited: 2024-11-09T02:10:21.521618642Z; ] Nov-08 18:10:25.674 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957593; id: 165; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856677); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/11/f910ddf0653778bcb56d79ed503c21 started: 1731118225670; exited: 2024-11-09T02:10:24.862542063Z; ] Nov-08 18:10:25.710 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957594; id: 168; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856680); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/19/40da99d8c59f87fcfad5be5fca8d84 started: 1731118225686; exited: 2024-11-09T02:10:24.672260852Z; ] Nov-08 18:10:25.730 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957595; id: 167; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856679); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/01/e7fbab91fa76e1357d119fb5cc798a started: 1731118225718; exited: 2024-11-09T02:10:24.672669956Z; ] Nov-08 18:10:25.736 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957596; id: 169; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856681); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/13/64edfdd39d27027a8d32a875379af5 started: 1731118225733; exited: 2024-11-09T02:10:24.935862152Z; ] Nov-08 18:10:25.770 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957597; id: 170; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856682); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/9f/e24b6b7a649b700d15d07d72b99f46 started: 1731118225748; exited: 2024-11-09T02:10:24.682298389Z; ] Nov-08 18:10:25.782 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957598; id: 172; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856684); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d3/4a7da61caf732f585f136d856fe6c0 started: 1731118225774; exited: 2024-11-09T02:10:24.903128032Z; ] Nov-08 18:10:25.816 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957599; id: 171; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856683); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/f1/ff7d283e5fc26dba1ffd4f75266ac8 started: 1731118225801; exited: 2024-11-09T02:10:24.882618679Z; ] Nov-08 18:10:25.822 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957600; id: 174; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856655); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/fd/e18f160febf1d7673736c608a2b2c3 started: 1731118225819; exited: 2024-11-09T02:10:24.835949408Z; ] Nov-08 18:10:25.836 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957601; id: 173; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856685); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/61/168114ae70207e1c500b199a6a3705 started: 1731118225828; exited: 2024-11-09T02:10:24.890646385Z; ] Nov-08 18:10:25.861 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957602; id: 176; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856659); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d6/420d335f8a587157c861897dcb6272 started: 1731118220552; exited: 2024-11-09T02:10:21.603179856Z; ] Nov-08 18:10:25.877 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957603; id: 175; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856656); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/19/86f7949059c1ee40bd8e3a8a37e835 started: 1731118220561; exited: 2024-11-09T02:10:21.560104426Z; ] Nov-08 18:10:25.889 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957604; id: 177; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856660); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/51/b54cb70549bd9fdd214a33ecd3470d started: 1731118220571; exited: 2024-11-09T02:10:21.621750231Z; ] Nov-08 18:10:25.911 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957605; id: 178; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430566); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/c5/bb3b9e5d7652746bb81d2f660279dd started: 1731118220579; exited: 2024-11-09T02:10:21.579495597Z; ] Nov-08 18:10:25.920 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957610; id: 180; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430568); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/8c/a9dd9bd32ec8c03e4bbe19ae5a2b34 started: 1731118220584; exited: 2024-11-09T02:10:21.622042169Z; ] Nov-08 18:10:25.932 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957611; id: 179; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430567); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/45/48f2ce9d8b0ebc3568ade67e60e1b4 started: 1731118220591; exited: 2024-11-09T02:10:23.494450856Z; ] Nov-08 18:10:25.954 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957614; id: 181; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430569); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/a4/091e1e2f4bbc5c1cf66055429a7ac1 started: 1731118220603; exited: 2024-11-09T02:10:23.400719724Z; ] Nov-08 18:10:25.966 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957615; id: 182; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430570); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/96/d7bef608a1f99ca9dec9c549dd426c started: 1731118220619; exited: 2024-11-09T02:10:21.892217947Z; ] Nov-08 18:10:25.977 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957616; id: 184; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430586); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/96/ed04445ef3195bef372e61bc966638 started: 1731118220634; exited: 2024-11-09T02:10:21.92739683Z; ] Nov-08 18:10:25.981 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957617; id: 183; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430575); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ae/86999f4ed31180a97fad313cc97bf0 started: 1731118220649; exited: 2024-11-09T02:10:21.938574651Z; ] Nov-08 18:10:25.991 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957618; id: 185; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430597); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/08/ab388bd009339bb7f498102be82ce2 started: 1731118220666; exited: 2024-11-09T02:10:21.922193588Z; ] Nov-08 18:10:25.994 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957623; id: 186; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430598); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/72/5d41a82a586b8c727d67db4f64e02a started: 1731118220671; exited: 2024-11-09T02:10:21.963855858Z; ] Nov-08 18:10:26.013 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957624; id: 188; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430600); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/f6/9021eab7fa2ced5e9da75d1e6c9422 started: 1731118220679; exited: 2024-11-09T02:10:21.917515634Z; ] Nov-08 18:10:26.034 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957626; id: 187; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430599); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/f8/441e287df7ca4d1c11414f192a42e5 started: 1731118220693; exited: 2024-11-09T02:10:21.515654087Z; ] Nov-08 18:10:26.046 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957629; id: 189; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430601); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/e8/afcaadbcd22cbe3d54d0ef2899976b started: 1731118220699; exited: 2024-11-09T02:10:21.561331663Z; ] Nov-08 18:10:26.082 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957630; id: 190; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430602); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/f2/25fc60c1caf8fded3214d97c72b5f7 started: 1731118220704; exited: 2024-11-09T02:10:21.529645175Z; ] Nov-08 18:10:26.099 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957632; id: 192; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430604); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/e6/3cf7bb55b1cd51ae3715f2a0723710 started: 1731118220715; exited: 2024-11-09T02:10:21.438919071Z; ] Nov-08 18:10:26.123 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957633; id: 191; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430603); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/b5/6d6abe827aa1a77b32a9d128c93771 started: 1731118220723; exited: 2024-11-09T02:10:21.522595132Z; ] Nov-08 18:10:26.184 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957640; id: 195; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430607); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/cb/24d8ea60c50685180f02c51fb7c51f started: 1731118220767; exited: 2024-11-09T02:10:25.091223584Z; ] Nov-08 18:10:26.193 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957671; id: 261; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (40); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/55/dcea5b33ac60eac18385acb31bbf8c started: 1731118226189; exited: 2024-11-09T02:10:23.195836646Z; ] Nov-08 18:10:26.203 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957672; id: 262; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (41); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d3/81fed9f861e7d20a704f0b7892d975 started: 1731118220775; exited: 2024-11-09T02:10:22.621430564Z; ] Nov-08 18:10:26.245 [TaskFinalizer-9] DEBUG nextflow.util.ThreadPoolBuilder - Creating thread pool 'PublishDir' minSize=10; maxSize=10; workQueue=LinkedBlockingQueue[10000]; allowCoreThreadTimeout=false Nov-08 18:10:26.427 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (26) > jobId: 21957874; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/19/3e7b2287a8ba0cd343bac4e1db339e Nov-08 18:10:26.427 [Task submitter] INFO nextflow.Session - [19/3e7b22] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (26) Nov-08 18:10:27.362 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (28) > jobId: 21957875; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/78/ae0effd0710a370ee152f767208ceb Nov-08 18:10:27.362 [Task submitter] INFO nextflow.Session - [78/ae0eff] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (28) Nov-08 18:10:28.361 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (29) > jobId: 21957877; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/89/3f4a036dc99993f4a93d607dff37f7 Nov-08 18:10:28.361 [Task submitter] INFO nextflow.Session - [89/3f4a03] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (29) Nov-08 18:10:29.364 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (30) > jobId: 21957878; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/5a/b921b98c7e9d98b6ab08e1b577e35b Nov-08 18:10:29.364 [Task submitter] INFO nextflow.Session - [5a/b921b9] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (30) Nov-08 18:10:30.350 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (31) > jobId: 21957880; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/48/5876dc28ec6600e74b9d3c62e2c607 Nov-08 18:10:30.350 [Task submitter] INFO nextflow.Session - [48/5876dc] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (31) Nov-08 18:10:31.360 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (32) > jobId: 21957881; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/eb/ad9fab9f164674b4dbbcc09cf6de83 Nov-08 18:10:31.361 [Task submitter] INFO nextflow.Session - [eb/ad9fab] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (32) Nov-08 18:10:32.366 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (33) > jobId: 21957882; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/fc/b6825b0cf6ccc7e7290f1cf6a26b13 Nov-08 18:10:32.366 [Task submitter] INFO nextflow.Session - [fc/b6825b] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (33) Nov-08 18:10:33.352 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (34) > jobId: 21957883; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ee/0544559df57f7fbc52ebf43c1cb9b6 Nov-08 18:10:33.352 [Task submitter] INFO nextflow.Session - [ee/054455] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (34) Nov-08 18:10:34.417 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (35) > jobId: 21957885; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/18/348ac4a0e8c9b5aea455c55694e795 Nov-08 18:10:34.418 [Task submitter] INFO nextflow.Session - [18/348ac4] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (35) Nov-08 18:10:35.384 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (36) > jobId: 21957886; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/a5/eedb8178780301ec09e45288cff820 Nov-08 18:10:35.384 [Task submitter] INFO nextflow.Session - [a5/eedb81] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (36) Nov-08 18:10:35.458 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957634; id: 193; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430605); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/5b/763a6b19ba172902e3fc5cf99659a9 started: 1731118220734; exited: 2024-11-09T02:10:31.085490628Z; ] Nov-08 18:10:35.462 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957636; id: 194; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430606); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/05/1e8b98ee8123b8b41ac452cd0e207f started: 1731118226128; exited: 2024-11-09T02:10:31.110894137Z; ] Nov-08 18:10:36.377 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (37) > jobId: 21957887; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/fa/e8be75e2b798bc009678e1d57ba6da Nov-08 18:10:36.377 [Task submitter] INFO nextflow.Session - [fa/e8be75] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (37) Nov-08 18:10:37.376 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (38) > jobId: 21957888; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/e9/cbc4607f760f77ee25d3c55274bb46 Nov-08 18:10:37.376 [Task submitter] INFO nextflow.Session - [e9/cbc460] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (38) Nov-08 18:10:38.361 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (39) > jobId: 21957889; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/c1/b45752c5c4ffabefd35e5859891cd6 Nov-08 18:10:38.361 [Task submitter] INFO nextflow.Session - [c1/b45752] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (39) Nov-08 18:10:39.358 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (91) > jobId: 21957896; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/24/f27f2e891e80a1a57832a790666921 Nov-08 18:10:39.359 [Task submitter] INFO nextflow.Session - [24/f27f2e] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (91) Nov-08 18:10:40.349 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (92) > jobId: 21957897; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/4d/12a2d2141026967ae2f67da816c188 Nov-08 18:10:40.349 [Task submitter] INFO nextflow.Session - [4d/12a2d2] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (92) Nov-08 18:10:40.351 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957586; id: 160; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856672); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/7f/1375f94792e848e29f8939ebff3038 started: 1731118225574; exited: 2024-11-09T02:10:39.613692538Z; ] Nov-08 18:10:41.369 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (94) > jobId: 21957898; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ca/baf982464eb743b792b3f6f71807c2 Nov-08 18:10:41.369 [Task submitter] INFO nextflow.Session - [ca/baf982] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (94) Nov-08 18:10:42.357 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (93) > jobId: 21957899; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/fe/3dd1fa7f7218a164077a4a0472a0b3 Nov-08 18:10:42.357 [Task submitter] INFO nextflow.Session - [fe/3dd1fa] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (93) Nov-08 18:10:43.350 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (96) > jobId: 21957900; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/4d/7cc722738c1de8e2158ddbfa3426a0 Nov-08 18:10:43.350 [Task submitter] INFO nextflow.Session - [4d/7cc722] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (96) Nov-08 18:10:44.356 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (97) > jobId: 21957901; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/a6/b6a82437a4d643f7a47aa1ed4a5abe Nov-08 18:10:44.356 [Task submitter] INFO nextflow.Session - [a6/b6a824] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (97) Nov-08 18:10:45.387 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (98) > jobId: 21957902; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/85/7e49375d11a6e7bad90f4ad9d64fc5 Nov-08 18:10:45.387 [Task submitter] INFO nextflow.Session - [85/7e4937] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (98) Nov-08 18:10:46.364 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (100) > jobId: 21957903; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/6c/b94ca8837eeea1cadd3d51797b759b Nov-08 18:10:46.364 [Task submitter] INFO nextflow.Session - [6c/b94ca8] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (100) Nov-08 18:10:47.368 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (99) > jobId: 21957904; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/da/e92c533f79e7f1f8f6feaeaff602a3 Nov-08 18:10:47.368 [Task submitter] INFO nextflow.Session - [da/e92c53] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (99) Nov-08 18:10:48.409 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (101) > jobId: 21957911; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/35/3a5fc72c03555d09a4124027bf559d Nov-08 18:10:48.409 [Task submitter] INFO nextflow.Session - [35/3a5fc7] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (101) Nov-08 18:10:50.648 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (102) > jobId: 21957913; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/29/29b7aa6e0b6a9241f596951a1271f7 Nov-08 18:10:50.648 [Task submitter] INFO nextflow.Session - [29/29b7aa] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (102) Nov-08 18:10:50.810 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (103) > jobId: 21957915; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/68/31a418c8545773194214a1080efe7a Nov-08 18:10:50.810 [Task submitter] INFO nextflow.Session - [68/31a418] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (103) Nov-08 18:10:53.128 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (104) > jobId: 21957916; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/33/f98b779aea121211c7b86c257aeefc Nov-08 18:10:53.128 [Task submitter] INFO nextflow.Session - [33/f98b77] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (104) Nov-08 18:10:53.213 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (105) > jobId: 21957917; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/07/9ea373da4acf402ff098611e4c29c8 Nov-08 18:10:53.213 [Task submitter] INFO nextflow.Session - [07/9ea373] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (105) Nov-08 18:10:53.347 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (106) > jobId: 21957918; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/36/8cb5b01f6377697661bce470bf8967 Nov-08 18:10:53.347 [Task submitter] INFO nextflow.Session - [36/8cb5b0] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (106) Nov-08 18:10:55.812 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (108) > jobId: 21957919; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/4a/f968ff4d133be3c464c4d53c74d3aa Nov-08 18:10:55.812 [Task submitter] INFO nextflow.Session - [4a/f968ff] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (108) Nov-08 18:10:55.901 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (107) > jobId: 21957920; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/3a/218dba4a25fa984586a39e1be6a674 Nov-08 18:10:55.901 [Task submitter] INFO nextflow.Session - [3a/218dba] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (107) Nov-08 18:10:58.293 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (110) > jobId: 21957930; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/f8/1e0bdd3791414fd617e9df8cfa8922 Nov-08 18:10:58.293 [Task submitter] INFO nextflow.Session - [f8/1e0bdd] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (110) Nov-08 18:10:58.463 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (109) > jobId: 21957936; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/c1/3fd22e812a6f8ea190b9901cebfc63 Nov-08 18:10:58.463 [Task submitter] INFO nextflow.Session - [c1/3fd22e] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (109) Nov-08 18:10:58.553 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (111) > jobId: 21957937; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/77/191c5a2b1e93bf8bf2f091615d751e Nov-08 18:10:58.553 [Task submitter] INFO nextflow.Session - [77/191c5a] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (111) Nov-08 18:10:59.395 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (112) > jobId: 21957938; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/55/77e7e7bf6e9aa49877bb540bb9d2c7 Nov-08 18:10:59.395 [Task submitter] INFO nextflow.Session - [55/77e7e7] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (112) Nov-08 18:11:00.355 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957573; id: 147; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856657); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/f5/cbbcc2131e95ac74ad3405a6c1b625 started: 1731118220346; exited: 2024-11-09T02:10:56.104507033Z; ] Nov-08 18:11:00.403 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (113) > jobId: 21957939; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ba/6b03725f77feb9097a77402b87d007 Nov-08 18:11:00.403 [Task submitter] INFO nextflow.Session - [ba/6b0372] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (113) Nov-08 18:11:01.406 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (114) > jobId: 21957944; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/15/59734668e7190caa74422e9b25a405 Nov-08 18:11:01.406 [Task submitter] INFO nextflow.Session - [15/597346] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (114) Nov-08 18:11:02.415 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (115) > jobId: 21957947; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/79/fc52fa5f1b03274cc7ead2b088a773 Nov-08 18:11:02.415 [Task submitter] INFO nextflow.Session - [79/fc52fa] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (115) Nov-08 18:11:03.395 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (117) > jobId: 21957948; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/3f/78c363577cd05921facf68585d9252 Nov-08 18:11:03.395 [Task submitter] INFO nextflow.Session - [3f/78c363] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (117) Nov-08 18:11:04.381 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (116) > jobId: 21957949; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/25/50f7fcf532d60aef99eb706c2a988b Nov-08 18:11:04.382 [Task submitter] INFO nextflow.Session - [25/50f7fc] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (116) Nov-08 18:11:05.390 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (119) > jobId: 21957950; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/50/3fb6851e7a3f66215b93c30778c5ad Nov-08 18:11:05.391 [Task submitter] INFO nextflow.Session - [50/3fb685] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (119) Nov-08 18:11:06.390 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (118) > jobId: 21957951; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/18/f993a8e3bb3b5de6e6f8f839d60cff Nov-08 18:11:06.390 [Task submitter] INFO nextflow.Session - [18/f993a8] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (118) Nov-08 18:11:07.387 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (121) > jobId: 21957952; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/78/5a9067491954dc93a4c4f7439204a5 Nov-08 18:11:07.388 [Task submitter] INFO nextflow.Session - [78/5a9067] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (121) Nov-08 18:11:08.443 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (120) > jobId: 21957957; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/13/2acbad6df467e13d4586846903c5d3 Nov-08 18:11:08.443 [Task submitter] INFO nextflow.Session - [13/2acbad] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (120) Nov-08 18:11:09.390 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (123) > jobId: 21957958; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/eb/1d05740cfd8023db49a505690061d1 Nov-08 18:11:09.391 [Task submitter] INFO nextflow.Session - [eb/1d0574] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (123) Nov-08 18:11:10.386 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (122) > jobId: 21957959; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/98/076ee130f8d8d3d8d32f2947d7a830 Nov-08 18:11:10.387 [Task submitter] INFO nextflow.Session - [98/076ee1] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (122) Nov-08 18:11:11.380 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (124) > jobId: 21957960; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/50/5fce52243aef40f788d863fd6ab610 Nov-08 18:11:11.380 [Task submitter] INFO nextflow.Session - [50/5fce52] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (124) Nov-08 18:11:12.403 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (125) > jobId: 21957964; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/7f/e769455b96dc8248a0ead6dce690f0 Nov-08 18:11:12.403 [Task submitter] INFO nextflow.Session - [7f/e76945] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (125) Nov-08 18:11:13.393 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (126) > jobId: 21957966; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/bc/d4638a520863cc690d0888bc00e903 Nov-08 18:11:13.393 [Task submitter] INFO nextflow.Session - [bc/d4638a] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (126) Nov-08 18:11:14.375 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (128) > jobId: 21957967; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/3c/96b7347fcafcdf495fdc3ffd9469a3 Nov-08 18:11:14.375 [Task submitter] INFO nextflow.Session - [3c/96b734] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (128) Nov-08 18:11:15.392 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (127) > jobId: 21957968; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/0a/397d7ee870c865fa7479adfd9e4260 Nov-08 18:11:15.392 [Task submitter] INFO nextflow.Session - [0a/397d7e] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (127) Nov-08 18:12:20.395 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957677; id: 264; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (43); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/08/89cfcd232920eb2b388670d456d199 started: 1731118340372; exited: 2024-11-09T02:12:19.669137997Z; ] Nov-08 18:12:20.448 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957680; id: 265; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (44); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ca/c902eca34ff71575822791975f477d started: 1731118340429; exited: 2024-11-09T02:12:19.699165773Z; ] Nov-08 18:12:20.561 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957686; id: 266; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (45); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/7b/018c23f9b1b3c3fc1fb5391a315f03 started: 1731118340539; exited: 2024-11-09T02:12:20.004152066Z; ] Nov-08 18:12:20.649 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957689; id: 267; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (46); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/86/fc84c33dd1f848d3a80185d421cdb6 started: 1731118340627; exited: 2024-11-09T02:12:19.923544811Z; ] Nov-08 18:12:20.726 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957690; id: 269; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (48); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/64/3f6de27c8b9439884b7933f559deab started: 1731118340705; exited: 2024-11-09T02:12:19.693911909Z; ] Nov-08 18:12:20.798 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957693; id: 271; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (50); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/33/9a7b93a0d316f02af5f4a0c496cd0e started: 1731118340792; exited: 2024-11-09T02:12:19.665199832Z; ] Nov-08 18:12:20.861 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957694; id: 272; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (51); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/be/c31796d197eceb9cc23b96996970ed started: 1731118340850; exited: 2024-11-09T02:12:19.61223072Z; ] Nov-08 18:12:20.904 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957695; id: 274; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (53); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/a4/bb9b40583f3971c8318110f995c73c started: 1731118340893; exited: 2024-11-09T02:12:19.592237366Z; ] Nov-08 18:12:20.916 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957696; id: 273; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (52); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/62/80ed0a9bf40c95686914407d280213 started: 1731118340913; exited: 2024-11-09T02:12:19.427561949Z; ] Nov-08 18:12:20.930 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957697; id: 275; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (54); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/57/24c04c0d8e03289ce7b2b54aeafa65 started: 1731118340927; exited: 2024-11-09T02:12:19.426601545Z; ] Nov-08 18:12:20.956 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957704; id: 276; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (55); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/60/a9b4575b4ae182b22ce6858bb3803e started: 1731118340943; exited: 2024-11-09T02:12:19.429978842Z; ] Nov-08 18:12:20.976 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957705; id: 277; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (56); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/78/8586b2bdde30e2b058648d1f2b7f2d started: 1731118340970; exited: 2024-11-09T02:12:19.431284339Z; ] Nov-08 18:12:20.989 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957706; id: 279; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (58); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/4f/c95fa85d76fdbffd3fdc33daa4f5b1 started: 1731118340986; exited: 2024-11-09T02:12:19.426418787Z; ] Nov-08 18:12:21.021 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957707; id: 278; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (57); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/0d/6c5a1ba4c1d6b84db683a603a37c4c started: 1731118341010; exited: 2024-11-09T02:12:19.435450545Z; ] Nov-08 18:12:21.040 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957711; id: 280; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (59); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/9f/edbeb3a8b236b0ddc686b39708bb73 started: 1731118341031; exited: 2024-11-09T02:12:19.430574284Z; ] Nov-08 18:12:21.061 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957712; id: 281; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (60); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/36/1d76b19d55fcfb4f4e7ff844ec15a5 started: 1731118341053; exited: 2024-11-09T02:12:19.446702105Z; ] Nov-08 18:12:21.077 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957714; id: 282; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (61); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/5c/b5e81bee10384db0963c3584bc1fcb started: 1731118341074; exited: 2024-11-09T02:12:19.4356621Z; ] Nov-08 18:12:21.098 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957715; id: 284; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (63); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/5a/90505e3621360dc07520630d2d1555 started: 1731118341091; exited: 2024-11-09T02:12:19.430219239Z; ] Nov-08 18:12:21.127 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957716; id: 283; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (62); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/2f/8d45936b7a0d41aaeb3eaed4216080 started: 1731118341118; exited: 2024-11-09T02:12:19.462657367Z; ] Nov-08 18:12:21.174 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957717; id: 285; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (64); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/10/455303d077861977ec641f8fac0b54 started: 1731118341150; exited: 2024-11-09T02:12:19.464259316Z; ] Nov-08 18:12:21.198 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957721; id: 286; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (65); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/82/7414d281028d00acee5ffb9461bdc5 started: 1731118341195; exited: 2024-11-09T02:12:20.198362338Z; ] Nov-08 18:12:21.213 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957722; id: 288; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (67); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/8c/c96166a7aea4abd255f7c795c328f6 started: 1731118341210; exited: 2024-11-09T02:12:20.212307992Z; ] Nov-08 18:12:21.265 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957723; id: 287; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (66); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/cc/582771a0495a60e9f266ac88c95f8a started: 1731118341248; exited: 2024-11-09T02:12:19.396850424Z; ] Nov-08 18:12:21.283 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957725; id: 289; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (68); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/b3/4c35b199df2b3576f5ca0172811cff started: 1731118341280; exited: 2024-11-09T02:12:19.455508143Z; ] Nov-08 18:12:21.292 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957729; id: 290; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (69); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ab/c681a090dbee3f6a1065e3f0f5fc29 started: 1731118341288; exited: 2024-11-09T02:12:19.134833898Z; ] Nov-08 18:12:21.314 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957731; id: 291; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (70); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/53/6e16f1fce1ccddfdbd14ce2a5f172b started: 1731118341297; exited: 2024-11-09T02:12:19.168900615Z; ] Nov-08 18:12:21.335 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957734; id: 292; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (71); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/6e/78b06f923d712084ed9fa5ea8ecbc0 started: 1731118341318; exited: 2024-11-09T02:12:19.379950169Z; ] Nov-08 18:12:21.371 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957735; id: 293; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (72); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/3a/da6b0886a9f89dd65478abb6fb1fad started: 1731118341348; exited: 2024-11-09T02:12:19.107133128Z; ] Nov-08 18:12:21.386 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957739; id: 294; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (73); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/84/6f4e11a352eb519219da5512f6a6ad started: 1731118341382; exited: 2024-11-09T02:12:19.10182815Z; ] Nov-08 18:12:21.398 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957740; id: 296; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (75); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d5/089a8e97ccdabfd9afb3b3ca2c9470 started: 1731118341392; exited: 2024-11-09T02:12:19.141125888Z; ] Nov-08 18:12:21.418 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957747; id: 295; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (74); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/b5/32cb16db4ddc461c3d40f0cf5fc254 started: 1731118341404; exited: 2024-11-09T02:12:19.369342052Z; ] Nov-08 18:12:21.448 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957748; id: 298; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (77); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/e7/70916d826ae62f40be512f5ff67309 started: 1731118341435; exited: 2024-11-09T02:12:19.251834017Z; ] Nov-08 18:12:21.458 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957749; id: 297; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (76); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/45/542af4e293405fcaf75a42069d721a started: 1731118341450; exited: 2024-11-09T02:12:19.255376357Z; ] Nov-08 18:12:21.468 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957750; id: 299; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (78); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/3c/ab087cae791124be5e29c271ed9a3c started: 1731118341466; exited: 2024-11-09T02:12:19.3308392Z; ] Nov-08 18:12:21.484 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957754; id: 300; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (79); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/35/e79fc6935314e7176a2c5624df9ad0 started: 1731118341481; exited: 2024-11-09T02:12:19.303592818Z; ] Nov-08 18:12:21.495 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957755; id: 302; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (81); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/9f/4a5ab3afaba9ed04fce2ac477598fc started: 1731118341492; exited: 2024-11-09T02:12:19.307789012Z; ] Nov-08 18:12:21.507 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957756; id: 301; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (80); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d2/39ab4d9c63e64d4ec57ce32552d9df started: 1731118341504; exited: 2024-11-09T02:12:19.314882988Z; ] Nov-08 18:12:21.525 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957757; id: 303; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (82); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d2/c3d2858ed876a6b0f5b5e160412976 started: 1731118341522; exited: 2024-11-09T02:12:19.438964442Z; ] Nov-08 18:12:21.536 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856652) > jobId: 21958006; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/f4/ddaab49a3b2c1a001d1bdfb7b6d520 Nov-08 18:12:21.536 [Task submitter] INFO nextflow.Session - [f4/ddaab4] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856652) Nov-08 18:12:21.548 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957760; id: 306; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (85); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/48/4b73643abd39d469b40255e76b400a started: 1731118341545; exited: 2024-11-09T02:12:19.624119158Z; ] Nov-08 18:12:21.562 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957761; id: 308; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (87); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/3f/c40c8862e23ae9d6b4bb44a62e6bfb started: 1731118341556; exited: 2024-11-09T02:12:19.578109539Z; ] Nov-08 18:12:21.576 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957763; id: 307; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (86); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ed/d858c0f640d18a264726a718b93a74 started: 1731118341571; exited: 2024-11-09T02:12:19.508320825Z; ] Nov-08 18:12:21.595 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957766; id: 309; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (88); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/a7/089be65db3e1e3920c0bd6e2683ff1 started: 1731118341588; exited: 2024-11-09T02:12:19.492431282Z; ] Nov-08 18:12:21.610 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957767; id: 310; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (89); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/91/b958ddcc1bf76b938018b45a68cc2b started: 1731118341607; exited: 2024-11-09T02:12:19.595491171Z; ] Nov-08 18:12:21.629 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957768; id: 311; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (90); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d4/608e43af0ce5f72f8e0e4a0a7dce8d started: 1731118341620; exited: 2024-11-09T02:12:19.582932384Z; ] Nov-08 18:12:21.645 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957769; id: 316; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (95); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/10/0129e708519c79cf9451cf73878929 started: 1731118341640; exited: 2024-11-09T02:12:19.578546007Z; ] Nov-08 18:12:22.571 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856654) > jobId: 21958007; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ca/f5cc7d804725bca39c464cf801279a Nov-08 18:12:22.571 [Task submitter] INFO nextflow.Session - [ca/f5cc7d] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856654) Nov-08 18:12:23.391 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430608) > jobId: 21958008; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/72/dbee953ea1a9be24caf956776a8840 Nov-08 18:12:23.392 [Task submitter] INFO nextflow.Session - [72/dbee95] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430608) Nov-08 18:12:24.622 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430571) > jobId: 21958010; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/18/4fa766e5af6e9a8943f8b5152e6073 Nov-08 18:12:24.623 [Task submitter] INFO nextflow.Session - [18/4fa766] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430571) Nov-08 18:12:25.383 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957692; id: 268; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (47); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/bb/46c2a1484ae9c495b212634df3921e started: 1731118340761; exited: 2024-11-09T02:12:25.33883036Z; ] Nov-08 18:12:25.393 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957759; id: 305; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (84); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/e6/aa2b07ecb320708c5d845fda81f9fe started: 1731118341533; exited: 2024-11-09T02:12:24.231303447Z; ] Nov-08 18:12:25.489 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430609) > jobId: 21958011; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/09/7b6f8167de6ca5206e655feaa4d900 Nov-08 18:12:25.489 [Task submitter] INFO nextflow.Session - [09/7b6f81] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430609) Nov-08 18:12:26.441 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430572) > jobId: 21958012; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/46/fec971a813d0094ed08519c5c279f3 Nov-08 18:12:26.442 [Task submitter] INFO nextflow.Session - [46/fec971] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430572) Nov-08 18:12:27.502 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430573) > jobId: 21958013; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/a3/14699658eebb31659cd2fff8f374f2 Nov-08 18:12:27.502 [Task submitter] INFO nextflow.Session - [a3/146996] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430573) Nov-08 18:12:28.466 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430576) > jobId: 21958014; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/85/e1b68d0f3bb4d3adcc41583c4a0274 Nov-08 18:12:28.466 [Task submitter] INFO nextflow.Session - [85/e1b68d] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430576) Nov-08 18:12:29.489 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430574) > jobId: 21958015; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/0f/40ea39121d8e2df54325b91d0efc40 Nov-08 18:12:29.489 [Task submitter] INFO nextflow.Session - [0f/40ea39] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430574) Nov-08 18:12:30.445 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430578) > jobId: 21958016; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/90/eecc0996bc238597ea504470308e59 Nov-08 18:12:30.445 [Task submitter] INFO nextflow.Session - [90/eecc09] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430578) Nov-08 18:12:31.437 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430577) > jobId: 21958017; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/63/5ce738c56e3332034a79cdf8686676 Nov-08 18:12:31.438 [Task submitter] INFO nextflow.Session - [63/5ce738] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430577) Nov-08 18:12:32.473 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430580) > jobId: 21958018; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/3c/5608b5f89b25116895ba1a776e4324 Nov-08 18:12:32.474 [Task submitter] INFO nextflow.Session - [3c/5608b5] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430580) Nov-08 18:12:33.443 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430579) > jobId: 21958019; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/c0/8660f66b7ebcf6a0dbf67c7fa0e365 Nov-08 18:12:33.443 [Task submitter] INFO nextflow.Session - [c0/8660f6] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430579) Nov-08 18:12:34.431 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430582) > jobId: 21958020; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d0/febc3322631d164331e1bdd5b0f0df Nov-08 18:12:34.431 [Task submitter] INFO nextflow.Session - [d0/febc33] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430582) Nov-08 18:12:35.442 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430581) > jobId: 21958021; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/0b/8aeec1f9d64244f17f996a56371d2e Nov-08 18:12:35.442 [Task submitter] INFO nextflow.Session - [0b/8aeec1] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430581) Nov-08 18:12:35.562 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957691; id: 270; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (49); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/fa/c654ba70285c130f33be3dd44fbf4e started: 1731118340734; exited: 2024-11-09T02:12:35.336163479Z; ] Nov-08 18:12:36.432 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430583) > jobId: 21958022; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/5d/375656702a1e58e3622f10babde7a7 Nov-08 18:12:36.432 [Task submitter] INFO nextflow.Session - [5d/375656] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430583) Nov-08 18:12:37.424 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430584) > jobId: 21958023; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/09/9eb1013e7d8a601a9d01f9deefad04 Nov-08 18:12:37.425 [Task submitter] INFO nextflow.Session - [09/9eb101] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430584) Nov-08 18:12:38.441 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430587) > jobId: 21958024; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/16/223397ad58fc4b86b84ea1dae418c9 Nov-08 18:12:38.441 [Task submitter] INFO nextflow.Session - [16/223397] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430587) Nov-08 18:12:39.418 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430585) > jobId: 21958025; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/a9/eb1169ca12137ce0c1ab653971a276 Nov-08 18:12:39.418 [Task submitter] INFO nextflow.Session - [a9/eb1169] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430585) Nov-08 18:12:40.354 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957758; id: 304; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (83); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/6f/05bd5a26ef5950d41574ae603ab50f started: 1731118341529; exited: 2024-11-09T02:12:35.948358693Z; ] Nov-08 18:12:40.448 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430589) > jobId: 21958026; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/16/e59f5178a7910ea94ffea09b715178 Nov-08 18:12:40.448 [Task submitter] INFO nextflow.Session - [16/e59f51] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430589) Nov-08 18:12:41.446 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430588) > jobId: 21958027; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/a7/7de2c0e2ffc3eedada124aa4079128 Nov-08 18:12:41.446 [Task submitter] INFO nextflow.Session - [a7/7de2c0] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430588) Nov-08 18:12:42.444 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430590) > jobId: 21958028; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/61/9e798f740ec2a7a4c9e2bbc4b0ade4 Nov-08 18:12:42.444 [Task submitter] INFO nextflow.Session - [61/9e798f] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430590) Nov-08 18:12:43.440 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430591) > jobId: 21958029; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/b4/d78ab32d6364a7567451ca5a17c61e Nov-08 18:12:43.440 [Task submitter] INFO nextflow.Session - [b4/d78ab3] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430591) Nov-08 18:12:44.450 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430592) > jobId: 21958030; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/b3/6f2a29fa97de2a96f3c2fccc9c61ae Nov-08 18:12:44.450 [Task submitter] INFO nextflow.Session - [b3/6f2a29] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430592) Nov-08 18:12:45.424 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430593) > jobId: 21958031; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/14/881deec7691714982d9f90e77d511c Nov-08 18:12:45.424 [Task submitter] INFO nextflow.Session - [14/881dee] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430593) Nov-08 18:12:46.444 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430594) > jobId: 21958032; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/f2/5adcfc8da3578aa38fd1b6127f5528 Nov-08 18:12:46.444 [Task submitter] INFO nextflow.Session - [f2/5adcfc] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430594) Nov-08 18:12:49.239 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430595) > jobId: 21958033; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/e0/afd3aaacd66c62ee333ccdb0e705a3 Nov-08 18:12:49.239 [Task submitter] INFO nextflow.Session - [e0/afd3aa] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430595) Nov-08 18:12:49.398 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430596) > jobId: 21958034; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/1e/aa3aad33e84dd5180393dc97c14df9 Nov-08 18:12:49.399 [Task submitter] INFO nextflow.Session - [1e/aa3aad] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430596) Nov-08 18:12:49.547 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (2) > jobId: 21958035; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/76/2dcc057a4993b834ba4c903090f6d8 Nov-08 18:12:49.547 [Task submitter] INFO nextflow.Session - [76/2dcc05] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (2) Nov-08 18:12:50.394 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957674; id: 263; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (42); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/67/bd96a5cce81e817ede9e83e3566840 started: 1731118340351; exited: 2024-11-09T02:12:49.798236971Z; ] Nov-08 18:12:51.869 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (1) > jobId: 21958036; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/07/a9456b7dc064a7549d580de10b5e7e Nov-08 18:12:51.869 [Task submitter] INFO nextflow.Session - [07/a9456b] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (1) Nov-08 18:12:52.039 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (3) > jobId: 21958037; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/23/57320eaf6eb5d5c3bc649d8f9dc0dc Nov-08 18:12:52.039 [Task submitter] INFO nextflow.Session - [23/57320e] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (3) Nov-08 18:12:54.437 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (4) > jobId: 21958038; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/6c/a3a09fae625bebfd335aa1995b9986 Nov-08 18:12:54.437 [Task submitter] INFO nextflow.Session - [6c/a3a09f] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (4) Nov-08 18:12:54.694 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (5) > jobId: 21958039; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/4b/761385b239afbb1f6a0f4066abb933 Nov-08 18:12:54.694 [Task submitter] INFO nextflow.Session - [4b/761385] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (5) Nov-08 18:12:54.840 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (6) > jobId: 21958040; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/e3/6cef0780c254821d8fb66e4bfdf115 Nov-08 18:12:54.841 [Task submitter] INFO nextflow.Session - [e3/6cef07] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (6) Nov-08 18:12:57.032 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (7) > jobId: 21958041; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/91/15f82ea33013bfbf6cf3629584e60c Nov-08 18:12:57.032 [Task submitter] INFO nextflow.Session - [91/15f82e] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (7) Nov-08 18:12:57.174 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (8) > jobId: 21958044; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/95/a066d5bcf47e995479d74ce6860a37 Nov-08 18:12:57.174 [Task submitter] INFO nextflow.Session - [95/a066d5] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (8) Nov-08 18:12:59.113 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (9) > jobId: 21958045; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/0b/82738071cc0c7b946ed50f94c71d91 Nov-08 18:12:59.113 [Task submitter] INFO nextflow.Session - [0b/827380] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (9) Nov-08 18:12:59.253 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (10) > jobId: 21958046; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/5f/2318388e8fa9bd7fee14059415f1b5 Nov-08 18:12:59.253 [Task submitter] INFO nextflow.Session - [5f/231838] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (10) Nov-08 18:12:59.571 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (11) > jobId: 21958047; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/26/e3ae8d2768979a435d23e5aad1953d Nov-08 18:12:59.571 [Task submitter] INFO nextflow.Session - [26/e3ae8d] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (11) Nov-08 18:13:00.569 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (13) > jobId: 21958048; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/bd/d0fd18520153451994576535aeb105 Nov-08 18:13:00.569 [Task submitter] INFO nextflow.Session - [bd/d0fd18] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (13) Nov-08 18:13:01.689 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (12) > jobId: 21958050; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/40/c9e67160095e8c3d6a35ae0af9c5b8 Nov-08 18:13:01.690 [Task submitter] INFO nextflow.Session - [40/c9e671] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (12) Nov-08 18:13:02.589 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (14) > jobId: 21958051; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/58/2fddfd11e4aee5e3f6f07ab7ce094d Nov-08 18:13:02.590 [Task submitter] INFO nextflow.Session - [58/2fddfd] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (14) Nov-08 18:13:03.587 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (15) > jobId: 21958052; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/02/6190bc3758077082fa8edc6390d90c Nov-08 18:13:03.587 [Task submitter] INFO nextflow.Session - [02/6190bc] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (15) Nov-08 18:13:04.606 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (16) > jobId: 21958053; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/68/78d4103e90d8324c6bdf4e85618017 Nov-08 18:13:04.606 [Task submitter] INFO nextflow.Session - [68/78d410] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (16) Nov-08 18:13:05.577 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (18) > jobId: 21958054; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/66/31f77c7bb5fce2a6e71839c3adbc2f Nov-08 18:13:05.578 [Task submitter] INFO nextflow.Session - [66/31f77c] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (18) Nov-08 18:13:06.583 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (17) > jobId: 21958055; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/b0/7068ff4b84dfc246a78f32acd23098 Nov-08 18:13:06.584 [Task submitter] INFO nextflow.Session - [b0/7068ff] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (17) Nov-08 18:13:07.567 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (20) > jobId: 21958056; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/b0/b3a66e0d5610f859e1d68fb73be3ab Nov-08 18:13:07.567 [Task submitter] INFO nextflow.Session - [b0/b3a66e] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (20) Nov-08 18:13:08.555 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (19) > jobId: 21958057; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/4c/948dc3ec88413414624105a57daad4 Nov-08 18:13:08.556 [Task submitter] INFO nextflow.Session - [4c/948dc3] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (19) Nov-08 18:13:09.586 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (21) > jobId: 21958058; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/68/a60cdb217a98eeb9e1fbad46d04bc1 Nov-08 18:13:09.586 [Task submitter] INFO nextflow.Session - [68/a60cdb] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (21) Nov-08 18:13:10.577 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (22) > jobId: 21958059; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/8b/e89a483715a761567ec00b96331ce5 Nov-08 18:13:10.577 [Task submitter] INFO nextflow.Session - [8b/e89a48] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (22) Nov-08 18:13:21.009 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > No more task to compute -- The following nodes are still active: [process] NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP status=ACTIVE port 0: (queue) OPEN ; channel: runinfo port 1: (cntrl) - ; channel: $ [process] NFCORE_FETCHNGS:SRA:SRA_FASTQ_FTP status=ACTIVE port 0: (queue) OPEN ; channel: - port 1: (cntrl) - ; channel: $ [process] NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:CUSTOM_SRATOOLSNCBISETTINGS status=ACTIVE port 0: (value) OPEN ; channel: ids port 1: (cntrl) - ; channel: $ [process] NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH status=ACTIVE port 0: (queue) OPEN ; channel: - port 1: (value) OPEN ; channel: ncbi_settings port 2: (value) bound ; channel: certificate port 3: (cntrl) - ; channel: $ [process] NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP status=ACTIVE port 0: (queue) OPEN ; channel: - port 1: (value) OPEN ; channel: ncbi_settings port 2: (value) bound ; channel: certificate port 3: (cntrl) - ; channel: $ [process] NFCORE_FETCHNGS:SRA:ASPERA_CLI status=ACTIVE port 0: (queue) OPEN ; channel: - port 1: (value) bound ; channel: user port 2: (cntrl) - ; channel: $ [process] NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET status=ACTIVE port 0: (queue) OPEN ; channel: meta port 1: (value) bound ; channel: pipeline port 2: (value) bound ; channel: strandedness port 3: (value) bound ; channel: mapping_fields port 4: (cntrl) - ; channel: $ [process] NFCORE_FETCHNGS:SRA:MULTIQC_MAPPINGS_CONFIG status=ACTIVE port 0: (queue) OPEN ; channel: csv port 1: (cntrl) - ; channel: $ Nov-08 18:13:25.348 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor slurm > tasks to be completed: 100 -- submitted tasks are shown below ~> TaskHandler[jobId: 21957874; id: 247; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (26); status: SUBMITTED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/19/3e7b2287a8ba0cd343bac4e1db339e started: -; exited: -; ] ~> TaskHandler[jobId: 21957875; id: 249; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (28); status: SUBMITTED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/78/ae0effd0710a370ee152f767208ceb started: -; exited: -; ] ~> TaskHandler[jobId: 21957877; id: 250; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (29); status: SUBMITTED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/89/3f4a036dc99993f4a93d607dff37f7 started: -; exited: -; ] ~> TaskHandler[jobId: 21957878; id: 251; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (30); status: SUBMITTED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/5a/b921b98c7e9d98b6ab08e1b577e35b started: -; exited: -; ] ~> TaskHandler[jobId: 21957880; id: 252; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (31); status: SUBMITTED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/48/5876dc28ec6600e74b9d3c62e2c607 started: -; exited: -; ] ~> TaskHandler[jobId: 21957881; id: 253; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (32); status: SUBMITTED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/eb/ad9fab9f164674b4dbbcc09cf6de83 started: -; exited: -; ] ~> TaskHandler[jobId: 21957882; id: 254; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (33); status: SUBMITTED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/fc/b6825b0cf6ccc7e7290f1cf6a26b13 started: -; exited: -; ] ~> TaskHandler[jobId: 21957883; id: 255; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (34); status: SUBMITTED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ee/0544559df57f7fbc52ebf43c1cb9b6 started: -; exited: -; ] ~> TaskHandler[jobId: 21957885; id: 256; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (35); status: SUBMITTED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/18/348ac4a0e8c9b5aea455c55694e795 started: -; exited: -; ] ~> TaskHandler[jobId: 21957886; id: 257; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (36); status: SUBMITTED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/a5/eedb8178780301ec09e45288cff820 started: -; exited: -; ] .. remaining tasks omitted. Nov-08 18:14:30.383 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957875; id: 249; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (28); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/78/ae0effd0710a370ee152f767208ceb started: 1731118470371; exited: 2024-11-09T02:14:27.27108614Z; ] Nov-08 18:14:30.393 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957877; id: 250; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (29); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/89/3f4a036dc99993f4a93d607dff37f7 started: 1731118470387; exited: 2024-11-09T02:14:27.933523309Z; ] Nov-08 18:14:30.403 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957878; id: 251; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (30); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/5a/b921b98c7e9d98b6ab08e1b577e35b started: 1731118470396; exited: 2024-11-09T02:14:27.539203762Z; ] Nov-08 18:14:30.422 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957880; id: 252; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (31); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/48/5876dc28ec6600e74b9d3c62e2c607 started: 1731118470406; exited: 2024-11-09T02:14:27.483409523Z; ] Nov-08 18:14:30.468 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957881; id: 253; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (32); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/eb/ad9fab9f164674b4dbbcc09cf6de83 started: 1731118470433; exited: 2024-11-09T02:14:27.535385568Z; ] Nov-08 18:14:30.486 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957882; id: 254; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (33); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/fc/b6825b0cf6ccc7e7290f1cf6a26b13 started: 1731118465353; exited: 2024-11-09T02:14:26.887985983Z; ] Nov-08 18:14:30.502 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957883; id: 255; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (34); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ee/0544559df57f7fbc52ebf43c1cb9b6 started: 1731118470495; exited: 2024-11-09T02:14:28.532979006Z; ] Nov-08 18:14:30.550 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957885; id: 256; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (35); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/18/348ac4a0e8c9b5aea455c55694e795 started: 1731118470527; exited: 2024-11-09T02:14:27.048031309Z; ] Nov-08 18:14:30.600 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (135) > jobId: 21958062; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/33/7b22a2d232a802e73a87e115744446 Nov-08 18:14:30.600 [Task submitter] INFO nextflow.Session - [33/7b22a2] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (135) Nov-08 18:14:30.617 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957886; id: 257; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (36); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/a5/eedb8178780301ec09e45288cff820 started: 1731118470583; exited: 2024-11-09T02:14:26.945564214Z; ] Nov-08 18:14:30.649 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957887; id: 258; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (37); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/fa/e8be75e2b798bc009678e1d57ba6da started: 1731118470641; exited: 2024-11-09T02:14:26.89704055Z; ] Nov-08 18:14:30.666 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957888; id: 259; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (38); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/e9/cbc4607f760f77ee25d3c55274bb46 started: 1731118465360; exited: 2024-11-09T02:14:26.731117791Z; ] Nov-08 18:14:30.677 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957889; id: 260; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (39); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/c1/b45752c5c4ffabefd35e5859891cd6 started: 1731118465366; exited: 2024-11-09T02:14:26.731135487Z; ] Nov-08 18:14:30.687 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957896; id: 312; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (91); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/24/f27f2e891e80a1a57832a790666921 started: 1731118465374; exited: 2024-11-09T02:14:26.748256576Z; ] Nov-08 18:14:31.095 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957897; id: 313; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (92); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/4d/12a2d2141026967ae2f67da816c188 started: 1731118465380; exited: 2024-11-09T02:14:26.737953935Z; ] Nov-08 18:14:31.110 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957898; id: 315; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (94); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ca/baf982464eb743b792b3f6f71807c2 started: 1731118471102; exited: 2024-11-09T02:14:26.733163317Z; ] Nov-08 18:14:31.143 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957899; id: 314; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (93); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/fe/3dd1fa7f7218a164077a4a0472a0b3 started: 1731118471113; exited: 2024-11-09T02:14:26.740261529Z; ] Nov-08 18:14:31.175 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957900; id: 317; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (96); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/4d/7cc722738c1de8e2158ddbfa3426a0 started: 1731118471148; exited: 2024-11-09T02:14:26.739458953Z; ] Nov-08 18:14:31.198 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957901; id: 318; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (97); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/a6/b6a82437a4d643f7a47aa1ed4a5abe started: 1731118471181; exited: 2024-11-09T02:14:26.740874181Z; ] Nov-08 18:14:31.225 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957902; id: 319; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (98); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/85/7e49375d11a6e7bad90f4ad9d64fc5 started: 1731118471213; exited: 2024-11-09T02:14:26.745643333Z; ] Nov-08 18:14:31.237 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957903; id: 321; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (100); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/6c/b94ca8837eeea1cadd3d51797b759b started: 1731118465407; exited: 2024-11-09T02:14:26.739771315Z; ] Nov-08 18:14:31.245 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957904; id: 320; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (99); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/da/e92c533f79e7f1f8f6feaeaff602a3 started: 1731118465417; exited: 2024-11-09T02:14:26.75346721Z; ] Nov-08 18:14:31.271 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957911; id: 322; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (101); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/35/3a5fc72c03555d09a4124027bf559d started: 1731118471254; exited: 2024-11-09T02:14:26.802206775Z; ] Nov-08 18:14:31.296 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957913; id: 323; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (102); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/29/29b7aa6e0b6a9241f596951a1271f7 started: 1731118471288; exited: 2024-11-09T02:14:26.760777979Z; ] Nov-08 18:14:31.327 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957915; id: 324; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (103); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/68/31a418c8545773194214a1080efe7a started: 1731118471314; exited: 2024-11-09T02:14:26.745580617Z; ] Nov-08 18:14:31.363 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957916; id: 325; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (104); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/33/f98b779aea121211c7b86c257aeefc started: 1731118471334; exited: 2024-11-09T02:14:26.78080409Z; ] Nov-08 18:14:31.426 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957918; id: 327; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (106); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/36/8cb5b01f6377697661bce470bf8967 started: 1731118471403; exited: 2024-11-09T02:14:26.772400787Z; ] Nov-08 18:14:31.436 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957919; id: 329; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (108); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/4a/f968ff4d133be3c464c4d53c74d3aa started: 1731118471433; exited: 2024-11-09T02:14:26.714775883Z; ] Nov-08 18:14:31.479 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957920; id: 328; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (107); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/3a/218dba4a25fa984586a39e1be6a674 started: 1731118465465; exited: 2024-11-09T02:14:26.736096429Z; ] Nov-08 18:14:31.500 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957930; id: 331; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (110); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/f8/1e0bdd3791414fd617e9df8cfa8922 started: 1731118471494; exited: 2024-11-09T02:14:26.742922204Z; ] Nov-08 18:14:31.503 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957936; id: 330; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (109); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/c1/3fd22e812a6f8ea190b9901cebfc63 started: 1731118465473; exited: 2024-11-09T02:14:26.709652786Z; ] Nov-08 18:14:31.513 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957937; id: 332; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (111); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/77/191c5a2b1e93bf8bf2f091615d751e started: 1731118465478; exited: 2024-11-09T02:14:26.769758841Z; ] Nov-08 18:14:31.534 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957938; id: 333; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (112); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/55/77e7e7bf6e9aa49877bb540bb9d2c7 started: 1731118465483; exited: 2024-11-09T02:14:26.790001898Z; ] Nov-08 18:14:31.546 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957939; id: 334; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (113); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ba/6b03725f77feb9097a77402b87d007 started: 1731118465487; exited: 2024-11-09T02:14:26.740443344Z; ] Nov-08 18:14:31.570 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957944; id: 335; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (114); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/15/59734668e7190caa74422e9b25a405 started: 1731118471563; exited: 2024-11-09T02:14:26.712178007Z; ] Nov-08 18:14:31.590 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957947; id: 336; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (115); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/79/fc52fa5f1b03274cc7ead2b088a773 started: 1731118465509; exited: 2024-11-09T02:14:26.801670759Z; ] Nov-08 18:14:31.597 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957948; id: 338; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (117); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/3f/78c363577cd05921facf68585d9252 started: 1731118465516; exited: 2024-11-09T02:14:26.511406183Z; ] Nov-08 18:14:31.632 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (137) > jobId: 21958063; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/5c/8e03e604e819b50d21a1361f444963 Nov-08 18:14:31.633 [Task submitter] INFO nextflow.Session - [5c/8e03e6] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (137) Nov-08 18:14:31.661 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957949; id: 337; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (116); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/25/50f7fcf532d60aef99eb706c2a988b started: 1731118465521; exited: 2024-11-09T02:14:26.718866773Z; ] Nov-08 18:14:31.706 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957950; id: 340; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (119); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/50/3fb6851e7a3f66215b93c30778c5ad started: 1731118465533; exited: 2024-11-09T02:14:26.746070451Z; ] Nov-08 18:14:31.712 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957951; id: 339; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (118); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/18/f993a8e3bb3b5de6e6f8f839d60cff started: 1731118465542; exited: 2024-11-09T02:14:26.548923941Z; ] Nov-08 18:14:31.787 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957958; id: 344; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (123); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/eb/1d05740cfd8023db49a505690061d1 started: 1731118471763; exited: 2024-11-09T02:14:27.084088842Z; ] Nov-08 18:14:31.827 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957959; id: 343; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (122); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/98/076ee130f8d8d3d8d32f2947d7a830 started: 1731118471816; exited: 2024-11-09T02:14:27.082420868Z; ] Nov-08 18:14:31.853 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957960; id: 345; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (124); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/50/5fce52243aef40f788d863fd6ab610 started: 1731118471841; exited: 2024-11-09T02:14:27.131136084Z; ] Nov-08 18:14:31.890 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957964; id: 346; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (125); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/7f/e769455b96dc8248a0ead6dce690f0 started: 1731118471882; exited: 2024-11-09T02:14:27.150586572Z; ] Nov-08 18:14:31.952 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957966; id: 347; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (126); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/bc/d4638a520863cc690d0888bc00e903 started: 1731118471920; exited: 2024-11-09T02:14:27.088515703Z; ] Nov-08 18:14:31.999 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957967; id: 349; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (128); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/3c/96b7347fcafcdf495fdc3ffd9469a3 started: 1731118471973; exited: 2024-11-09T02:14:27.065710883Z; ] Nov-08 18:14:32.048 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957968; id: 348; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (127); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/0a/397d7ee870c865fa7479adfd9e4260 started: 1731118472023; exited: 2024-11-09T02:14:26.685485193Z; ] Nov-08 18:14:32.554 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (136) > jobId: 21958064; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/a5/1f80f2d48296949ad14d21c347b21e Nov-08 18:14:32.554 [Task submitter] INFO nextflow.Session - [a5/1f80f2] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (136) Nov-08 18:14:33.578 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (138) > jobId: 21958065; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/46/034b1137480ed2f193de06c224527f Nov-08 18:14:33.578 [Task submitter] INFO nextflow.Session - [46/034b11] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (138) Nov-08 18:14:34.592 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (139) > jobId: 21958066; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d6/a4977d98cd79d7239318c5b53609cb Nov-08 18:14:34.592 [Task submitter] INFO nextflow.Session - [d6/a4977d] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (139) Nov-08 18:14:35.579 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (140) > jobId: 21958068; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/b9/69fa7b8efa179a01b690ce2089cb24 Nov-08 18:14:35.579 [Task submitter] INFO nextflow.Session - [b9/69fa7b] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (140) Nov-08 18:14:36.582 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (141) > jobId: 21958069; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/18/f694b29722e5c716fadca6ceaa510a Nov-08 18:14:36.582 [Task submitter] INFO nextflow.Session - [18/f694b2] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (141) Nov-08 18:14:37.604 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (142) > jobId: 21958070; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/e5/7793a368b6eb9429caeca0569bded3 Nov-08 18:14:37.604 [Task submitter] INFO nextflow.Session - [e5/7793a3] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (142) Nov-08 18:14:38.568 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (143) > jobId: 21958071; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/9e/36c191d232f8f1356d6146dd547ead Nov-08 18:14:38.568 [Task submitter] INFO nextflow.Session - [9e/36c191] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (143) Nov-08 18:14:39.584 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (144) > jobId: 21958072; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/05/9d65173d979088595536cca2c1a097 Nov-08 18:14:39.585 [Task submitter] INFO nextflow.Session - [05/9d6517] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (144) Nov-08 18:14:40.556 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957917; id: 326; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (105); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/07/9ea373da4acf402ff098611e4c29c8 started: 1731118471368; exited: 2024-11-09T02:14:35.790960785Z; ] Nov-08 18:14:40.560 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957952; id: 342; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (121); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/78/5a9067491954dc93a4c4f7439204a5 started: 1731118471719; exited: 2024-11-09T02:14:35.421743928Z; ] Nov-08 18:14:40.577 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957957; id: 341; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (120); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/13/2acbad6df467e13d4586846903c5d3 started: 1731118471733; exited: 2024-11-09T02:14:37.227647751Z; ] Nov-08 18:14:40.587 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (146) > jobId: 21958073; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/e5/1d1429123e767a338ee9092a05d6cf Nov-08 18:14:40.587 [Task submitter] INFO nextflow.Session - [e5/1d1429] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (146) Nov-08 18:14:41.573 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (145) > jobId: 21958074; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/9f/5e92841ddb1e058c6e15919aaa045e Nov-08 18:14:41.573 [Task submitter] INFO nextflow.Session - [9f/5e9284] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (145) Nov-08 18:14:42.598 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (148) > jobId: 21958075; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d0/34e4c8e37a1986584c49b0a1c68ccc Nov-08 18:14:42.598 [Task submitter] INFO nextflow.Session - [d0/34e4c8] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (148) Nov-08 18:14:43.578 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (147) > jobId: 21958076; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/19/daedbc32eb7ac112e8a04b9a9b3739 Nov-08 18:14:43.578 [Task submitter] INFO nextflow.Session - [19/daedbc] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (147) Nov-08 18:14:44.591 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (149) > jobId: 21958077; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/68/8572e18e9efab2f42eef3f45773c49 Nov-08 18:14:44.591 [Task submitter] INFO nextflow.Session - [68/8572e1] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (149) Nov-08 18:14:45.555 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (150) > jobId: 21958078; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/5e/afc1bed7e0152f52fa9afdfe1beadc Nov-08 18:14:45.555 [Task submitter] INFO nextflow.Session - [5e/afc1be] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (150) Nov-08 18:14:46.624 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (151) > jobId: 21958079; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/f9/9ef559cb519aa6e27f0258b29cf70e Nov-08 18:14:46.624 [Task submitter] INFO nextflow.Session - [f9/9ef559] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (151) Nov-08 18:14:47.569 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (152) > jobId: 21958080; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/a4/219cd53fe6ef2a9d1e38b655d36508 Nov-08 18:14:47.569 [Task submitter] INFO nextflow.Session - [a4/219cd5] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (152) Nov-08 18:14:48.594 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (153) > jobId: 21958081; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/07/ea04118ab6ba0796b64dc40f45c997 Nov-08 18:14:48.594 [Task submitter] INFO nextflow.Session - [07/ea0411] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (153) Nov-08 18:14:49.582 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (154) > jobId: 21958082; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/32/2c519b0c1dbf84bf2affbb29b1b7db Nov-08 18:14:49.582 [Task submitter] INFO nextflow.Session - [32/2c519b] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (154) Nov-08 18:14:50.564 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (155) > jobId: 21958083; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/99/4aafccfa7e6dc94d37697ca1d0cbfe Nov-08 18:14:50.565 [Task submitter] INFO nextflow.Session - [99/4aafcc] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (155) Nov-08 18:14:51.568 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (156) > jobId: 21958084; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/fb/ee03b474438a8211965e435acaffdb Nov-08 18:14:51.569 [Task submitter] INFO nextflow.Session - [fb/ee03b4] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (156) Nov-08 18:14:52.582 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (157) > jobId: 21958085; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/66/74124e16fb9e546f3e9335e51adcfb Nov-08 18:14:52.582 [Task submitter] INFO nextflow.Session - [66/74124e] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (157) Nov-08 18:14:53.573 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (158) > jobId: 21958086; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/bc/91662ee4be96b090b10385a6efc201 Nov-08 18:14:53.573 [Task submitter] INFO nextflow.Session - [bc/91662e] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (158) Nov-08 18:14:54.601 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (159) > jobId: 21958087; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/f0/1a309d8af13051f2e2839433f534da Nov-08 18:14:54.601 [Task submitter] INFO nextflow.Session - [f0/1a309d] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (159) Nov-08 18:14:57.071 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (160) > jobId: 21958089; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/06/29509d8002f3883f2baecc8e706377 Nov-08 18:14:57.071 [Task submitter] INFO nextflow.Session - [06/29509d] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (160) Nov-08 18:14:57.219 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993901) > jobId: 21958090; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/48/129a8de0f6f3c9e6b7288a7d1fc9ef Nov-08 18:14:57.219 [Task submitter] INFO nextflow.Session - [48/129a8d] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993901) Nov-08 18:14:59.572 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993902) > jobId: 21958091; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/17/035c9823ec7967f468819af0a8b39e Nov-08 18:14:59.572 [Task submitter] INFO nextflow.Session - [17/035c98] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993902) Nov-08 18:14:59.697 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993904) > jobId: 21958092; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/7c/d451cf498f0bc859a7ddd4e9a46dc9 Nov-08 18:14:59.697 [Task submitter] INFO nextflow.Session - [7c/d451cf] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993904) Nov-08 18:14:59.812 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993903) > jobId: 21958093; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/db/88dc27d585957eb82690db870c1953 Nov-08 18:14:59.812 [Task submitter] INFO nextflow.Session - [db/88dc27] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993903) Nov-08 18:15:02.165 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993906) > jobId: 21958094; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/81/e993974b3c09d96768187922f2bf06 Nov-08 18:15:02.165 [Task submitter] INFO nextflow.Session - [81/e99397] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993906) Nov-08 18:15:02.312 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993905) > jobId: 21958095; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/fb/a45e4a84698fee71c02c52db7061da Nov-08 18:15:02.312 [Task submitter] INFO nextflow.Session - [fb/a45e4a] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993905) Nov-08 18:15:04.676 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993907) > jobId: 21958096; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/49/db74cc57e55206946bc1662f5947bc Nov-08 18:15:04.676 [Task submitter] INFO nextflow.Session - [49/db74cc] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993907) Nov-08 18:15:04.839 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993908) > jobId: 21958097; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ef/73ed783c2a7598226ff8032c0a8674 Nov-08 18:15:04.839 [Task submitter] INFO nextflow.Session - [ef/73ed78] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993908) Nov-08 18:15:04.984 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993910) > jobId: 21958098; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/4a/e8a6b1ff2df3156e9ce7be3a1ee0d0 Nov-08 18:15:04.984 [Task submitter] INFO nextflow.Session - [4a/e8a6b1] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993910) Nov-08 18:15:07.192 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993909) > jobId: 21958099; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/6b/b8a541083564ed80349dd7117cadbb Nov-08 18:15:07.192 [Task submitter] INFO nextflow.Session - [6b/b8a541] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993909) Nov-08 18:15:07.327 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993912) > jobId: 21958100; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/05/476220df95107293f35fb9baafe826 Nov-08 18:15:07.327 [Task submitter] INFO nextflow.Session - [05/476220] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993912) Nov-08 18:15:07.983 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993911) > jobId: 21958102; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/cc/5f94cb4ac6dc0d6830210263b11f8f Nov-08 18:15:07.983 [Task submitter] INFO nextflow.Session - [cc/5f94cb] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993911) Nov-08 18:15:08.812 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993913) > jobId: 21958103; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/51/51027a239b2c542e0a6b7707341d32 Nov-08 18:15:08.812 [Task submitter] INFO nextflow.Session - [51/51027a] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993913) Nov-08 18:15:09.823 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993915) > jobId: 21958104; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/74/78252ec779ee4dadcf342b9e548b89 Nov-08 18:15:09.823 [Task submitter] INFO nextflow.Session - [74/78252e] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993915) Nov-08 18:15:10.374 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21957874; id: 247; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (26); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/19/3e7b2287a8ba0cd343bac4e1db339e started: 1731118470353; exited: 2024-11-09T02:15:06.25828405Z; ] Nov-08 18:15:10.812 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993914) > jobId: 21958105; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/71/a829a7d2a8440dbfc2cce37f8f6254 Nov-08 18:15:10.812 [Task submitter] INFO nextflow.Session - [71/a829a7] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993914) Nov-08 18:15:11.838 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993917) > jobId: 21958106; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/be/04951c1a8c214133ac5f48c4fae5f4 Nov-08 18:15:11.838 [Task submitter] INFO nextflow.Session - [be/04951c] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993917) Nov-08 18:15:12.822 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993916) > jobId: 21958107; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/07/a3ca5540f4e29d909cf9e41fae96ef Nov-08 18:15:12.823 [Task submitter] INFO nextflow.Session - [07/a3ca55] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993916) Nov-08 18:15:13.815 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993918) > jobId: 21958108; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/97/fb24936e0f6bf053f29c2fd4dc9167 Nov-08 18:15:13.815 [Task submitter] INFO nextflow.Session - [97/fb2493] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993918) Nov-08 18:15:14.815 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993919) > jobId: 21958109; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/92/6eba05f19168ee960f230a38958bc1 Nov-08 18:15:14.815 [Task submitter] INFO nextflow.Session - [92/6eba05] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993919) Nov-08 18:15:15.817 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993920) > jobId: 21958110; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/0b/b3852cbd079d19a5d1ae406ccacc7e Nov-08 18:15:15.818 [Task submitter] INFO nextflow.Session - [0b/b3852c] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993920) Nov-08 18:15:16.849 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993921) > jobId: 21958111; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/77/30b1e1c04ef0320cf6aedccff5809c Nov-08 18:15:16.849 [Task submitter] INFO nextflow.Session - [77/30b1e1] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993921) Nov-08 18:15:17.799 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993922) > jobId: 21958112; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/75/0d38cb002780d4abdae6e42ed1ad54 Nov-08 18:15:17.799 [Task submitter] INFO nextflow.Session - [75/0d38cb] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993922) Nov-08 18:15:18.814 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993924) > jobId: 21958113; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d9/275090b2941ee1436fb7ad65fa33b1 Nov-08 18:15:18.814 [Task submitter] INFO nextflow.Session - [d9/275090] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993924) Nov-08 18:15:19.805 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993923) > jobId: 21958114; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/18/c5834d9d14b136f8f02d86efed7b5f Nov-08 18:15:19.805 [Task submitter] INFO nextflow.Session - [18/c5834d] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993923) Nov-08 18:16:30.522 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958014; id: 202; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430576); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/85/e1b68d0f3bb4d3adcc41583c4a0274 started: 1731118590518; exited: 2024-11-09T02:16:30.434678877Z; ] Nov-08 18:16:30.662 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958028; id: 215; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430590); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/61/9e798f740ec2a7a4c9e2bbc4b0ade4 started: 1731118590658; exited: 2024-11-09T02:16:30.481761971Z; ] Nov-08 18:16:30.671 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958029; id: 216; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430591); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/b4/d78ab32d6364a7567451ca5a17c61e started: 1731118590667; exited: 2024-11-09T02:16:30.644755938Z; ] Nov-08 18:16:30.691 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958030; id: 217; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430592); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/b3/6f2a29fa97de2a96f3c2fccc9c61ae started: 1731118590681; exited: 2024-11-09T02:16:30.632191219Z; ] Nov-08 18:16:30.716 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958031; id: 218; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430593); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/14/881deec7691714982d9f90e77d511c started: 1731118590704; exited: 2024-11-09T02:16:30.645533048Z; ] Nov-08 18:16:30.735 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958032; id: 219; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430594); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/f2/5adcfc8da3578aa38fd1b6127f5528 started: 1731118590729; exited: 2024-11-09T02:16:30.483363624Z; ] Nov-08 18:16:30.767 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958034; id: 221; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430596); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/1e/aa3aad33e84dd5180393dc97c14df9 started: 1731118590751; exited: 2024-11-09T02:16:30.470895139Z; ] Nov-08 18:16:30.790 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958035; id: 223; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (2); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/76/2dcc057a4993b834ba4c903090f6d8 started: 1731118590783; exited: 2024-11-09T02:16:28.443158659Z; ] Nov-08 18:16:30.814 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958036; id: 222; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (1); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/07/a9456b7dc064a7549d580de10b5e7e started: 1731118590806; exited: 2024-11-09T02:16:28.569097278Z; ] Nov-08 18:16:30.826 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958037; id: 224; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (3); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/23/57320eaf6eb5d5c3bc649d8f9dc0dc started: 1731118590823; exited: 2024-11-09T02:16:28.586044426Z; ] Nov-08 18:16:30.841 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958038; id: 225; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (4); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/6c/a3a09fae625bebfd335aa1995b9986 started: 1731118590837; exited: 2024-11-09T02:16:28.469753781Z; ] Nov-08 18:16:30.853 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958039; id: 226; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (5); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/4b/761385b239afbb1f6a0f4066abb933 started: 1731118590849; exited: 2024-11-09T02:16:28.556388834Z; ] Nov-08 18:16:30.878 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958040; id: 227; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (6); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/e3/6cef0780c254821d8fb66e4bfdf115 started: 1731118590866; exited: 2024-11-09T02:16:28.436033996Z; ] Nov-08 18:16:30.889 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958041; id: 228; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (7); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/91/15f82ea33013bfbf6cf3629584e60c started: 1731118590886; exited: 2024-11-09T02:16:28.655167299Z; ] Nov-08 18:16:30.907 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958044; id: 229; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (8); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/95/a066d5bcf47e995479d74ce6860a37 started: 1731118590898; exited: 2024-11-09T02:16:28.454680326Z; ] Nov-08 18:16:30.929 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958045; id: 230; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (9); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/0b/82738071cc0c7b946ed50f94c71d91 started: 1731118590923; exited: 2024-11-09T02:16:28.579634789Z; ] Nov-08 18:16:30.955 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958046; id: 231; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (10); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/5f/2318388e8fa9bd7fee14059415f1b5 started: 1731118590944; exited: 2024-11-09T02:16:28.531544534Z; ] Nov-08 18:16:30.973 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958047; id: 232; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (11); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/26/e3ae8d2768979a435d23e5aad1953d started: 1731118590958; exited: 2024-11-09T02:16:28.565571958Z; ] Nov-08 18:16:30.975 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (129) > jobId: 21958118; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/c0/e4a1f84a4e53a22e5076d39c11a79b Nov-08 18:16:30.975 [Task submitter] INFO nextflow.Session - [c0/e4a1f8] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (129) Nov-08 18:16:30.987 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958048; id: 234; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (13); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/bd/d0fd18520153451994576535aeb105 started: 1731118590979; exited: 2024-11-09T02:16:28.557797756Z; ] Nov-08 18:16:30.993 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958050; id: 233; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (12); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/40/c9e67160095e8c3d6a35ae0af9c5b8 started: 1731118590990; exited: 2024-11-09T02:16:28.584468991Z; ] Nov-08 18:16:31.011 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958051; id: 235; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (14); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/58/2fddfd11e4aee5e3f6f07ab7ce094d started: 1731118591008; exited: 2024-11-09T02:16:29.809825697Z; ] Nov-08 18:16:31.037 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958052; id: 236; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (15); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/02/6190bc3758077082fa8edc6390d90c started: 1731118591023; exited: 2024-11-09T02:16:29.028525765Z; ] Nov-08 18:16:31.046 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958053; id: 237; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (16); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/68/78d4103e90d8324c6bdf4e85618017 started: 1731118591041; exited: 2024-11-09T02:16:28.546456278Z; ] Nov-08 18:16:31.060 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958054; id: 239; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (18); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/66/31f77c7bb5fce2a6e71839c3adbc2f started: 1731118591049; exited: 2024-11-09T02:16:28.547910007Z; ] Nov-08 18:16:31.077 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958055; id: 238; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (17); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/b0/7068ff4b84dfc246a78f32acd23098 started: 1731118591062; exited: 2024-11-09T02:16:28.497408067Z; ] Nov-08 18:16:31.088 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958056; id: 241; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (20); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/b0/b3a66e0d5610f859e1d68fb73be3ab started: 1731118591085; exited: 2024-11-09T02:16:28.546752118Z; ] Nov-08 18:16:31.095 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958057; id: 240; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (19); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/4c/948dc3ec88413414624105a57daad4 started: 1731118591091; exited: 2024-11-09T02:16:28.535958558Z; ] Nov-08 18:16:31.118 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958058; id: 242; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (21); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/68/a60cdb217a98eeb9e1fbad46d04bc1 started: 1731118591108; exited: 2024-11-09T02:16:28.539988689Z; ] Nov-08 18:16:31.132 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958059; id: 243; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (22); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/8b/e89a483715a761567ec00b96331ce5 started: 1731118591123; exited: 2024-11-09T02:16:28.469404952Z; ] Nov-08 18:16:31.868 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (130) > jobId: 21958119; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/4e/68c7a7a9d444df413d2e0a336e7211 Nov-08 18:16:31.868 [Task submitter] INFO nextflow.Session - [4e/68c7a7] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (130) Nov-08 18:16:32.948 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (132) > jobId: 21958120; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d3/a90d33ba694965076f0aaff7a163d6 Nov-08 18:16:32.948 [Task submitter] INFO nextflow.Session - [d3/a90d33] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (132) Nov-08 18:16:33.969 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (131) > jobId: 21958121; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/91/b8f5a3b287268a7dd2a783d7103ab0 Nov-08 18:16:33.969 [Task submitter] INFO nextflow.Session - [91/b8f5a3] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (131) Nov-08 18:16:34.875 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (134) > jobId: 21958122; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d2/aab5cf4990ede67b30b2ae1e4a14e8 Nov-08 18:16:34.875 [Task submitter] INFO nextflow.Session - [d2/aab5cf] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (134) Nov-08 18:16:35.370 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958007; id: 146; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856654); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ca/f5cc7d804725bca39c464cf801279a started: 1731118590393; exited: 2024-11-09T02:16:30.818528146Z; ] Nov-08 18:16:35.402 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958008; id: 196; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430608); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/72/dbee953ea1a9be24caf956776a8840 started: 1731118590416; exited: 2024-11-09T02:16:30.928246668Z; ] Nov-08 18:16:35.435 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958010; id: 198; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430571); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/18/4fa766e5af6e9a8943f8b5152e6073 started: 1731118590449; exited: 2024-11-09T02:16:30.816167876Z; ] Nov-08 18:16:35.458 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958011; id: 197; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430609); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/09/7b6f8167de6ca5206e655feaa4d900 started: 1731118590474; exited: 2024-11-09T02:16:30.71127143Z; ] Nov-08 18:16:35.480 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958012; id: 199; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430572); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/46/fec971a813d0094ed08519c5c279f3 started: 1731118590508; exited: 2024-11-09T02:16:30.837169142Z; ] Nov-08 18:16:35.510 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958013; id: 200; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430573); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/a3/14699658eebb31659cd2fff8f374f2 started: 1731118590514; exited: 2024-11-09T02:16:30.696826478Z; ] Nov-08 18:16:35.527 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958015; id: 201; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430574); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/0f/40ea39121d8e2df54325b91d0efc40 started: 1731118590527; exited: 2024-11-09T02:16:30.891065552Z; ] Nov-08 18:16:35.540 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958016; id: 204; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430578); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/90/eecc0996bc238597ea504470308e59 started: 1731118590534; exited: 2024-11-09T02:16:30.912476414Z; ] Nov-08 18:16:35.558 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958017; id: 203; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430577); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/63/5ce738c56e3332034a79cdf8686676 started: 1731118590543; exited: 2024-11-09T02:16:30.911153803Z; ] Nov-08 18:16:35.575 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958018; id: 206; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430580); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/3c/5608b5f89b25116895ba1a776e4324 started: 1731118590555; exited: 2024-11-09T02:16:30.827110488Z; ] Nov-08 18:16:35.597 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958019; id: 205; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430579); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/c0/8660f66b7ebcf6a0dbf67c7fa0e365 started: 1731118590569; exited: 2024-11-09T02:16:31.431747142Z; ] Nov-08 18:16:35.613 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958020; id: 208; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430582); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d0/febc3322631d164331e1bdd5b0f0df started: 1731118590585; exited: 2024-11-09T02:16:30.825277795Z; ] Nov-08 18:16:35.632 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958021; id: 207; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430581); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/0b/8aeec1f9d64244f17f996a56371d2e started: 1731118590594; exited: 2024-11-09T02:16:31.42666792Z; ] Nov-08 18:16:35.654 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958022; id: 209; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430583); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/5d/375656702a1e58e3622f10babde7a7 started: 1731118590604; exited: 2024-11-09T02:16:31.427021611Z; ] Nov-08 18:16:35.677 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958023; id: 210; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430584); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/09/9eb1013e7d8a601a9d01f9deefad04 started: 1731118590613; exited: 2024-11-09T02:16:30.819002933Z; ] Nov-08 18:16:35.703 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958024; id: 212; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430587); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/16/223397ad58fc4b86b84ea1dae418c9 started: 1731118590623; exited: 2024-11-09T02:16:30.823762792Z; ] Nov-08 18:16:35.729 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958025; id: 211; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430585); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/a9/eb1169ca12137ce0c1ab653971a276 started: 1731118590631; exited: 2024-11-09T02:16:30.885727994Z; ] Nov-08 18:16:35.738 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958026; id: 214; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430589); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/16/e59f5178a7910ea94ffea09b715178 started: 1731118590639; exited: 2024-11-09T02:16:30.748530588Z; ] Nov-08 18:16:35.752 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958027; id: 213; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430588); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/a7/7de2c0e2ffc3eedada124aa4079128 started: 1731118590649; exited: 2024-11-09T02:16:30.822378811Z; ] Nov-08 18:16:35.781 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958033; id: 220; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR13430595); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/e0/afd3aaacd66c62ee333ccdb0e705a3 started: 1731118590743; exited: 2024-11-09T02:16:31.366737999Z; ] Nov-08 18:16:35.932 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (133) > jobId: 21958123; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/dc/48a571a34ee2d76742076219157fbc Nov-08 18:16:35.933 [Task submitter] INFO nextflow.Session - [dc/48a571] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (133) Nov-08 18:16:36.822 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (161) > jobId: 21958124; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/68/58e0c72879ee1734e1e08900b99bcd Nov-08 18:16:36.822 [Task submitter] INFO nextflow.Session - [68/58e0c7] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (161) Nov-08 18:16:37.877 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (162) > jobId: 21958125; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d5/345807989a9dabd6ef4ea5e3a42679 Nov-08 18:16:37.877 [Task submitter] INFO nextflow.Session - [d5/345807] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (162) Nov-08 18:16:38.814 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (163) > jobId: 21958126; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/0e/04f2e55977c357f2e4c027ce2faa20 Nov-08 18:16:38.815 [Task submitter] INFO nextflow.Session - [0e/04f2e5] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (163) Nov-08 18:16:39.826 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (165) > jobId: 21958127; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/17/608806271228085661c925a03ff815 Nov-08 18:16:39.826 [Task submitter] INFO nextflow.Session - [17/608806] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (165) Nov-08 18:16:40.825 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (164) > jobId: 21958128; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/c7/38ffa5d1b8a32c5a59116c4c13a7a4 Nov-08 18:16:40.826 [Task submitter] INFO nextflow.Session - [c7/38ffa5] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (164) Nov-08 18:16:41.795 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (166) > jobId: 21958129; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/e7/7d135de33642eb4db8f1c50024bbdf Nov-08 18:16:41.795 [Task submitter] INFO nextflow.Session - [e7/7d135d] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (166) Nov-08 18:16:42.815 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (167) > jobId: 21958130; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/a3/5072e27cc1917d9cae237a8ab445ec Nov-08 18:16:42.815 [Task submitter] INFO nextflow.Session - [a3/5072e2] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (167) Nov-08 18:16:43.812 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (168) > jobId: 21958131; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/26/64258fc49977f900c02073139be2ab Nov-08 18:16:43.812 [Task submitter] INFO nextflow.Session - [26/64258f] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (168) Nov-08 18:16:44.817 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (169) > jobId: 21958132; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/e7/4f7a1443f6e1dbc557673533bfa7cd Nov-08 18:16:44.817 [Task submitter] INFO nextflow.Session - [e7/4f7a14] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (169) Nov-08 18:16:45.813 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (170) > jobId: 21958133; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/08/7d6e032913a56ae50893a76fb02e74 Nov-08 18:16:45.813 [Task submitter] INFO nextflow.Session - [08/7d6e03] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (170) Nov-08 18:16:46.825 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (171) > jobId: 21958134; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/3d/462408f9246e5e6a92a25e8e9e0473 Nov-08 18:16:46.825 [Task submitter] INFO nextflow.Session - [3d/462408] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (171) Nov-08 18:16:47.825 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (172) > jobId: 21958135; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/44/78d9ad91171ed1bea4e763db46b3c2 Nov-08 18:16:47.825 [Task submitter] INFO nextflow.Session - [44/78d9ad] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (172) Nov-08 18:16:48.845 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (173) > jobId: 21958136; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/84/a715850842dfa7fc1c5f9e8c485433 Nov-08 18:16:48.846 [Task submitter] INFO nextflow.Session - [84/a71585] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (173) Nov-08 18:16:49.807 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (174) > jobId: 21958137; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/68/2a7c962973aeca12cc57976a5ebb76 Nov-08 18:16:49.808 [Task submitter] INFO nextflow.Session - [68/2a7c96] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (174) Nov-08 18:16:50.802 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (176) > jobId: 21958138; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/6f/95838c28d7f5588713bbbd5c64c1b4 Nov-08 18:16:50.802 [Task submitter] INFO nextflow.Session - [6f/95838c] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (176) Nov-08 18:16:51.823 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (177) > jobId: 21958139; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/5b/6d6e48a9ce4344900b53eb81992927 Nov-08 18:16:51.824 [Task submitter] INFO nextflow.Session - [5b/6d6e48] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (177) Nov-08 18:16:52.824 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (175) > jobId: 21958144; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/0f/2c29cb73703ebba25dc101102166f1 Nov-08 18:16:52.824 [Task submitter] INFO nextflow.Session - [0f/2c29cb] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (175) Nov-08 18:16:53.813 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (178) > jobId: 21958145; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/0b/6736a6d272886499c562fcf74f4650 Nov-08 18:16:53.814 [Task submitter] INFO nextflow.Session - [0b/6736a6] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (178) Nov-08 18:16:54.825 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (179) > jobId: 21958146; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/a7/461ab2bd252ba3321bc80ba8aa2dfb Nov-08 18:16:54.825 [Task submitter] INFO nextflow.Session - [a7/461ab2] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (179) Nov-08 18:16:55.832 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (181) > jobId: 21958147; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/86/afbb20bd9e048b473d5dcdca367b6d Nov-08 18:16:55.832 [Task submitter] INFO nextflow.Session - [86/afbb20] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (181) Nov-08 18:16:58.283 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (180) > jobId: 21958148; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/15/3bff2d4b850c79c896a8575ebeae0b Nov-08 18:16:58.283 [Task submitter] INFO nextflow.Session - [15/3bff2d] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (180) Nov-08 18:16:58.409 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (182) > jobId: 21958149; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/1a/bb6f3ef312f8245b6bc1476adbc872 Nov-08 18:16:58.409 [Task submitter] INFO nextflow.Session - [1a/bb6f3e] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (182) Nov-08 18:17:00.405 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958006; id: 144; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856652); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/f4/ddaab49a3b2c1a001d1bdfb7b6d520 started: 1731118590377; exited: 2024-11-09T02:16:59.186836398Z; ] Nov-08 18:17:00.900 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (183) > jobId: 21958150; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/f3/74e6ea23f27d6addb30619d3f68dd0 Nov-08 18:17:00.900 [Task submitter] INFO nextflow.Session - [f3/74e6ea] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (183) Nov-08 18:17:01.047 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (184) > jobId: 21958151; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/b2/41338a9f23a1b516d9a5934a58dd92 Nov-08 18:17:01.048 [Task submitter] INFO nextflow.Session - [b2/41338a] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (184) Nov-08 18:17:01.187 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (185) > jobId: 21958152; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/de/e8a4d1fd5b3ba36afbb6316e205aad Nov-08 18:17:01.187 [Task submitter] INFO nextflow.Session - [de/e8a4d1] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (185) Nov-08 18:17:03.519 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (186) > jobId: 21958153; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/6f/7aa44da533bde75e95837ca3c2400a Nov-08 18:17:03.519 [Task submitter] INFO nextflow.Session - [6f/7aa44d] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (186) Nov-08 18:17:03.780 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (187) > jobId: 21958175; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/22/3f902af82b59eb1c6052a4fba25a3c Nov-08 18:17:03.780 [Task submitter] INFO nextflow.Session - [22/3f902a] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (187) Nov-08 18:17:05.511 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (188) > jobId: 21958176; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/c0/5c94b7fd015c9cf27ba2caae949e1c Nov-08 18:17:05.511 [Task submitter] INFO nextflow.Session - [c0/5c94b7] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (188) Nov-08 18:17:05.672 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993925) > jobId: 21958187; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/71/6a9bd88a4ab0b2a174f6e84ad365c5 Nov-08 18:17:05.672 [Task submitter] INFO nextflow.Session - [71/6a9bd8] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993925) Nov-08 18:17:06.077 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993926) > jobId: 21958209; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/0f/21c8c0f7ced0e39abe08975ca6c627 Nov-08 18:17:06.078 [Task submitter] INFO nextflow.Session - [0f/21c8c0] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993926) Nov-08 18:17:07.128 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993927) > jobId: 21958217; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/b7/6d7f4b2bbd923b123f0deb1439f1bd Nov-08 18:17:07.128 [Task submitter] INFO nextflow.Session - [b7/6d7f4b] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993927) Nov-08 18:17:08.081 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993928) > jobId: 21958218; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/1b/1a7aff58a6f72f47085e5a13a0de3f Nov-08 18:17:08.081 [Task submitter] INFO nextflow.Session - [1b/1a7aff] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993928) Nov-08 18:17:09.077 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993929) > jobId: 21958219; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/59/1bca14c982b68344cb292761ebebfa Nov-08 18:17:09.078 [Task submitter] INFO nextflow.Session - [59/1bca14] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993929) Nov-08 18:17:10.154 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993930) > jobId: 21958220; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/5c/f94ee39431394dc69b6fe80af9312e Nov-08 18:17:10.154 [Task submitter] INFO nextflow.Session - [5c/f94ee3] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993930) Nov-08 18:17:11.268 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856650) > jobId: 21958226; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/66/3588917ed098bd391c6517378bdd1c Nov-08 18:17:11.269 [Task submitter] INFO nextflow.Session - [66/358891] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856650) Nov-08 18:17:12.047 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993931) > jobId: 21958246; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/4f/a3fee0c5e430a6adfed6b4c0d11a48 Nov-08 18:17:12.048 [Task submitter] INFO nextflow.Session - [4f/a3fee0] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993931) Nov-08 18:17:13.142 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856651) > jobId: 21958264; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/15/562bb658535b237c48f865cbb89be8 Nov-08 18:17:13.142 [Task submitter] INFO nextflow.Session - [15/562bb6] Submitted process > NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856651) Nov-08 18:17:14.126 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (23) > jobId: 21958265; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/a8/dec79db474e5866888c0775b83cc3d Nov-08 18:17:14.127 [Task submitter] INFO nextflow.Session - [a8/dec79d] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (23) Nov-08 18:17:15.167 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (24) > jobId: 21958269; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/b5/f14a4c2b59a05723cecfaf8a8c6072 Nov-08 18:17:15.167 [Task submitter] INFO nextflow.Session - [b5/f14a4c] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (24) Nov-08 18:17:16.072 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (25) > jobId: 21958270; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/8c/a6d4b02d325a8f22e1d048bc4a431b Nov-08 18:17:16.072 [Task submitter] INFO nextflow.Session - [8c/a6d4b0] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (25) Nov-08 18:17:17.102 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (27) > jobId: 21958271; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/45/0ffc39723cbbcf7d31ad69925d82d3 Nov-08 18:17:17.102 [Task submitter] INFO nextflow.Session - [45/0ffc39] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (27) Nov-08 18:18:21.027 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > No more task to compute -- The following nodes are still active: [process] NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP status=ACTIVE port 0: (queue) OPEN ; channel: runinfo port 1: (cntrl) - ; channel: $ [process] NFCORE_FETCHNGS:SRA:SRA_FASTQ_FTP status=ACTIVE port 0: (queue) OPEN ; channel: - port 1: (cntrl) - ; channel: $ [process] NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:CUSTOM_SRATOOLSNCBISETTINGS status=ACTIVE port 0: (value) OPEN ; channel: ids port 1: (cntrl) - ; channel: $ [process] NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH status=ACTIVE port 0: (queue) OPEN ; channel: - port 1: (value) OPEN ; channel: ncbi_settings port 2: (value) bound ; channel: certificate port 3: (cntrl) - ; channel: $ [process] NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP status=ACTIVE port 0: (queue) OPEN ; channel: - port 1: (value) OPEN ; channel: ncbi_settings port 2: (value) bound ; channel: certificate port 3: (cntrl) - ; channel: $ [process] NFCORE_FETCHNGS:SRA:ASPERA_CLI status=ACTIVE port 0: (queue) OPEN ; channel: - port 1: (value) bound ; channel: user port 2: (cntrl) - ; channel: $ [process] NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET status=ACTIVE port 0: (queue) OPEN ; channel: meta port 1: (value) bound ; channel: pipeline port 2: (value) bound ; channel: strandedness port 3: (value) bound ; channel: mapping_fields port 4: (cntrl) - ; channel: $ [process] NFCORE_FETCHNGS:SRA:MULTIQC_MAPPINGS_CONFIG status=ACTIVE port 0: (queue) OPEN ; channel: csv port 1: (cntrl) - ; channel: $ Nov-08 18:18:25.353 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor slurm > tasks to be completed: 97 -- submitted tasks are shown below ~> TaskHandler[jobId: 21958062; id: 356; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (135); status: SUBMITTED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/33/7b22a2d232a802e73a87e115744446 started: -; exited: -; ] ~> TaskHandler[jobId: 21958063; id: 358; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (137); status: SUBMITTED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/5c/8e03e604e819b50d21a1361f444963 started: -; exited: -; ] ~> TaskHandler[jobId: 21958064; id: 357; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (136); status: SUBMITTED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/a5/1f80f2d48296949ad14d21c347b21e started: -; exited: -; ] ~> TaskHandler[jobId: 21958065; id: 359; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (138); status: SUBMITTED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/46/034b1137480ed2f193de06c224527f started: -; exited: -; ] ~> TaskHandler[jobId: 21958066; id: 360; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (139); status: SUBMITTED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d6/a4977d98cd79d7239318c5b53609cb started: -; exited: -; ] ~> TaskHandler[jobId: 21958068; id: 361; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (140); status: SUBMITTED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/b9/69fa7b8efa179a01b690ce2089cb24 started: -; exited: -; ] ~> TaskHandler[jobId: 21958069; id: 362; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (141); status: SUBMITTED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/18/f694b29722e5c716fadca6ceaa510a started: -; exited: -; ] ~> TaskHandler[jobId: 21958070; id: 363; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (142); status: SUBMITTED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/e5/7793a368b6eb9429caeca0569bded3 started: -; exited: -; ] ~> TaskHandler[jobId: 21958071; id: 364; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (143); status: SUBMITTED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/9e/36c191d232f8f1356d6146dd547ead started: -; exited: -; ] ~> TaskHandler[jobId: 21958072; id: 365; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (144); status: SUBMITTED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/05/9d65173d979088595536cca2c1a097 started: -; exited: -; ] .. remaining tasks omitted. Nov-08 18:18:30.447 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958070; id: 363; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (142); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/e5/7793a368b6eb9429caeca0569bded3 started: 1731118710443; exited: 2024-11-09T02:18:27.302713642Z; ] Nov-08 18:18:30.460 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958071; id: 364; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (143); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/9e/36c191d232f8f1356d6146dd547ead started: 1731118710456; exited: 2024-11-09T02:18:27.30492927Z; ] Nov-08 18:18:30.482 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958072; id: 365; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (144); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/05/9d65173d979088595536cca2c1a097 started: 1731118710477; exited: 2024-11-09T02:18:27.859642703Z; ] Nov-08 18:18:30.519 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958073; id: 367; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (146); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/e5/1d1429123e767a338ee9092a05d6cf started: 1731118710507; exited: 2024-11-09T02:18:27.84838837Z; ] Nov-08 18:18:30.536 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958074; id: 366; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (145); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/9f/5e92841ddb1e058c6e15919aaa045e started: 1731118710532; exited: 2024-11-09T02:18:27.869257926Z; ] Nov-08 18:18:30.550 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958075; id: 369; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (148); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d0/34e4c8e37a1986584c49b0a1c68ccc started: 1731118710540; exited: 2024-11-09T02:18:27.790984783Z; ] Nov-08 18:18:30.561 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958076; id: 368; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (147); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/19/daedbc32eb7ac112e8a04b9a9b3739 started: 1731118710553; exited: 2024-11-09T02:18:27.780537483Z; ] Nov-08 18:18:30.571 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958077; id: 370; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (149); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/68/8572e18e9efab2f42eef3f45773c49 started: 1731118710566; exited: 2024-11-09T02:18:27.787665723Z; ] Nov-08 18:18:30.595 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958078; id: 371; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (150); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/5e/afc1bed7e0152f52fa9afdfe1beadc started: 1731118710574; exited: 2024-11-09T02:18:27.787480024Z; ] Nov-08 18:18:30.859 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958079; id: 372; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (151); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/f9/9ef559cb519aa6e27f0258b29cf70e started: 1731118710598; exited: 2024-11-09T02:18:27.780166665Z; ] Nov-08 18:18:30.903 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958080; id: 373; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (152); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/a4/219cd53fe6ef2a9d1e38b655d36508 started: 1731118710894; exited: 2024-11-09T02:18:27.681561348Z; ] Nov-08 18:18:30.925 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958081; id: 374; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (153); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/07/ea04118ab6ba0796b64dc40f45c997 started: 1731118710913; exited: 2024-11-09T02:18:27.694479774Z; ] Nov-08 18:18:30.940 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958082; id: 375; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (154); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/32/2c519b0c1dbf84bf2affbb29b1b7db started: 1731118710930; exited: 2024-11-09T02:18:27.685544886Z; ] Nov-08 18:18:30.972 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958083; id: 376; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (155); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/99/4aafccfa7e6dc94d37697ca1d0cbfe started: 1731118710944; exited: 2024-11-09T02:18:27.674628942Z; ] Nov-08 18:18:30.983 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958084; id: 377; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (156); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/fb/ee03b474438a8211965e435acaffdb started: 1731118710976; exited: 2024-11-09T02:18:27.681758253Z; ] Nov-08 18:18:30.993 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958085; id: 378; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (157); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/66/74124e16fb9e546f3e9335e51adcfb started: 1731118710988; exited: 2024-11-09T02:18:27.62959822Z; ] Nov-08 18:18:31.011 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958086; id: 379; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (158); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/bc/91662ee4be96b090b10385a6efc201 started: 1731118710996; exited: 2024-11-09T02:18:27.587747196Z; ] Nov-08 18:18:31.029 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958087; id: 380; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (159); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/f0/1a309d8af13051f2e2839433f534da started: 1731118711024; exited: 2024-11-09T02:18:27.60492107Z; ] Nov-08 18:18:31.040 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958089; id: 381; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (160); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/06/29509d8002f3883f2baecc8e706377 started: 1731118711032; exited: 2024-11-09T02:18:27.613516744Z; ] Nov-08 18:18:31.061 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958090; id: 111; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993901); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/48/129a8de0f6f3c9e6b7288a7d1fc9ef started: 1731118711045; exited: 2024-11-09T02:18:29.582382638Z; ] Nov-08 18:18:31.076 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958091; id: 112; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993902); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/17/035c9823ec7967f468819af0a8b39e started: 1731118711071; exited: 2024-11-09T02:18:29.995340461Z; ] Nov-08 18:18:31.311 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (189) > jobId: 21958428; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/0f/7d9c6ec876a2f72e7e5eaa96a68b3d Nov-08 18:18:31.311 [Task submitter] INFO nextflow.Session - [0f/7d9c6e] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (189) Nov-08 18:18:31.447 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (190) > jobId: 21958429; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/41/dadfe4bb1075e4ae1aef73fb2902b6 Nov-08 18:18:31.448 [Task submitter] INFO nextflow.Session - [41/dadfe4] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (190) Nov-08 18:18:35.366 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958063; id: 358; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (137); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/5c/8e03e604e819b50d21a1361f444963 started: 1731118710358; exited: 2024-11-09T02:18:31.032460484Z; ] Nov-08 18:18:35.434 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958064; id: 357; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (136); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/a5/1f80f2d48296949ad14d21c347b21e started: 1731118710374; exited: 2024-11-09T02:18:32.075368166Z; ] Nov-08 18:18:35.460 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958065; id: 359; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (138); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/46/034b1137480ed2f193de06c224527f started: 1731118710397; exited: 2024-11-09T02:18:32.087761839Z; ] Nov-08 18:18:35.483 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958066; id: 360; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (139); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d6/a4977d98cd79d7239318c5b53609cb started: 1731118710406; exited: 2024-11-09T02:18:32.060983519Z; ] Nov-08 18:18:35.495 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958068; id: 361; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (140); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/b9/69fa7b8efa179a01b690ce2089cb24 started: 1731118710423; exited: 2024-11-09T02:18:30.532484979Z; ] Nov-08 18:18:35.523 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958069; id: 362; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (141); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/18/f694b29722e5c716fadca6ceaa510a started: 1731118710433; exited: 2024-11-09T02:18:32.026860507Z; ] Nov-08 18:18:35.533 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958092; id: 114; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993904); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/7c/d451cf498f0bc859a7ddd4e9a46dc9 started: 1731118715529; exited: 2024-11-09T02:18:34.654187754Z; ] Nov-08 18:18:35.537 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958093; id: 113; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993903); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/db/88dc27d585957eb82690db870c1953 started: 1731118711095; exited: 2024-11-09T02:18:34.653874264Z; ] Nov-08 18:18:35.542 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958094; id: 116; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993906); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/81/e993974b3c09d96768187922f2bf06 started: 1731118711107; exited: 2024-11-09T02:18:34.65465573Z; ] Nov-08 18:18:35.556 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958095; id: 115; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993905); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/fb/a45e4a84698fee71c02c52db7061da started: 1731118715553; exited: 2024-11-09T02:18:35.230489316Z; ] Nov-08 18:18:35.593 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958096; id: 117; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993907); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/49/db74cc57e55206946bc1662f5947bc started: 1731118711138; exited: 2024-11-09T02:18:34.654669123Z; ] Nov-08 18:18:35.649 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958103; id: 123; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993913); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/51/51027a239b2c542e0a6b7707341d32 started: 1731118711203; exited: 2024-11-09T02:18:34.817309659Z; ] Nov-08 18:18:35.698 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958104; id: 125; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993915); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/74/78252ec779ee4dadcf342b9e548b89 started: 1731118711209; exited: 2024-11-09T02:18:34.840463283Z; ] Nov-08 18:18:35.871 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958105; id: 124; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993914); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/71/a829a7d2a8440dbfc2cce37f8f6254 started: 1731118715705; exited: 2024-11-09T02:18:34.823409362Z; ] Nov-08 18:18:35.879 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (192) > jobId: 21958430; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/5e/d4c31e14a5f0c9af0432756d6a2a51 Nov-08 18:18:35.879 [Task submitter] INFO nextflow.Session - [5e/d4c31e] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (192) Nov-08 18:18:35.883 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958106; id: 127; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993917); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/be/04951c1a8c214133ac5f48c4fae5f4 started: 1731118711218; exited: 2024-11-09T02:18:34.817196642Z; ] Nov-08 18:18:35.914 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958107; id: 126; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993916); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/07/a3ca5540f4e29d909cf9e41fae96ef started: 1731118715899; exited: 2024-11-09T02:18:35.412209583Z; ] Nov-08 18:18:35.926 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958108; id: 128; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993918); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/97/fb24936e0f6bf053f29c2fd4dc9167 started: 1731118711230; exited: 2024-11-09T02:18:35.676839126Z; ] Nov-08 18:18:35.963 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958111; id: 131; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993921); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/77/30b1e1c04ef0320cf6aedccff5809c started: 1731118711248; exited: 2024-11-09T02:18:35.81628171Z; ] Nov-08 18:18:35.996 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958113; id: 134; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993924); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d9/275090b2941ee1436fb7ad65fa33b1 started: 1731118711258; exited: 2024-11-09T02:18:35.270330221Z; ] Nov-08 18:18:36.011 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958114; id: 133; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993923); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/18/c5834d9d14b136f8f02d86efed7b5f started: 1731118711266; exited: 2024-11-09T02:18:35.115942025Z; ] Nov-08 18:18:36.168 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (191) > jobId: 21958431; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/94/842c4722cc12daa130680cdd24342c Nov-08 18:18:36.168 [Task submitter] INFO nextflow.Session - [94/842c47] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (191) Nov-08 18:18:36.919 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (193) > jobId: 21958432; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/b1/bcdb45ad7672e229e584fba879aa6d Nov-08 18:18:36.919 [Task submitter] INFO nextflow.Session - [b1/bcdb45] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (193) Nov-08 18:18:37.818 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (194) > jobId: 21958433; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/50/11bbbd050d1d2ea8b3fdb2c4123fad Nov-08 18:18:37.818 [Task submitter] INFO nextflow.Session - [50/11bbbd] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (194) Nov-08 18:18:38.754 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (195) > jobId: 21958434; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/12/aa148005536072dac4c8c075ace94f Nov-08 18:18:38.754 [Task submitter] INFO nextflow.Session - [12/aa1480] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (195) Nov-08 18:18:39.822 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (196) > jobId: 21958435; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ae/ad4477d3223ea7460a149b18e53fa1 Nov-08 18:18:39.822 [Task submitter] INFO nextflow.Session - [ae/ad4477] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (196) Nov-08 18:18:40.362 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958062; id: 356; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (135); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/33/7b22a2d232a802e73a87e115744446 started: 1731118715358; exited: 2024-11-09T02:18:35.98439079Z; ] Nov-08 18:18:40.368 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958097; id: 118; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993908); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ef/73ed783c2a7598226ff8032c0a8674 started: 1731118711161; exited: 2024-11-09T02:18:36.230353203Z; ] Nov-08 18:18:40.375 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958098; id: 120; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993910); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/4a/e8a6b1ff2df3156e9ce7be3a1ee0d0 started: 1731118715603; exited: 2024-11-09T02:18:36.216333534Z; ] Nov-08 18:18:40.385 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958099; id: 119; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993909); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/6b/b8a541083564ed80349dd7117cadbb started: 1731118711181; exited: 2024-11-09T02:18:36.232396869Z; ] Nov-08 18:18:40.392 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958100; id: 122; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993912); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/05/476220df95107293f35fb9baafe826 started: 1731118715611; exited: 2024-11-09T02:18:36.724761458Z; ] Nov-08 18:18:40.403 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958102; id: 121; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993911); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/cc/5f94cb4ac6dc0d6830210263b11f8f started: 1731118715618; exited: 2024-11-09T02:18:36.212828244Z; ] Nov-08 18:18:40.448 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958109; id: 129; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993919); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/92/6eba05f19168ee960f230a38958bc1 started: 1731118715935; exited: 2024-11-09T02:18:36.423165743Z; ] Nov-08 18:18:40.474 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958110; id: 130; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993920); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/0b/b3852cbd079d19a5d1ae406ccacc7e started: 1731118715953; exited: 2024-11-09T02:18:36.426111876Z; ] Nov-08 18:18:40.485 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958112; id: 132; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993922); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/75/0d38cb002780d4abdae6e42ed1ad54 started: 1731118715979; exited: 2024-11-09T02:18:36.414782843Z; ] Nov-08 18:18:40.760 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (197) > jobId: 21958436; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/7d/0cf939085877d07c07a327631cb110 Nov-08 18:18:40.760 [Task submitter] INFO nextflow.Session - [7d/0cf939] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (197) Nov-08 18:18:41.801 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (198) > jobId: 21958437; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d4/67654f2da15bf599c7f4f4e87dd70b Nov-08 18:18:41.802 [Task submitter] INFO nextflow.Session - [d4/67654f] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (198) Nov-08 18:18:42.868 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (199) > jobId: 21958438; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/6b/5c6d2f4a274c9752b9ac8469aab4f7 Nov-08 18:18:42.868 [Task submitter] INFO nextflow.Session - [6b/5c6d2f] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (199) Nov-08 18:18:43.755 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (200) > jobId: 21958439; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/0f/02e1aa5867cd1c489179a17c2c728b Nov-08 18:18:43.755 [Task submitter] INFO nextflow.Session - [0f/02e1aa] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (200) Nov-08 18:18:44.772 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (201) > jobId: 21958440; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/6d/8d1e0a1c604efb2087c4447e73e4fa Nov-08 18:18:44.773 [Task submitter] INFO nextflow.Session - [6d/8d1e0a] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (201) Nov-08 18:18:45.902 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (202) > jobId: 21958462; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/41/3c35f1b828cf21b33c60834e8abbea Nov-08 18:18:45.902 [Task submitter] INFO nextflow.Session - [41/3c35f1] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (202) Nov-08 18:18:46.763 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (203) > jobId: 21958473; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/64/078cd2b679e3043a37538c33aee8ee Nov-08 18:18:46.763 [Task submitter] INFO nextflow.Session - [64/078cd2] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (203) Nov-08 18:18:47.763 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (204) > jobId: 21958474; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/5e/73656d84a04078c3fe47c68c0bbcab Nov-08 18:18:47.763 [Task submitter] INFO nextflow.Session - [5e/73656d] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (204) Nov-08 18:18:48.906 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (205) > jobId: 21958485; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d4/63389bb2103bb79d4f565489438744 Nov-08 18:18:48.906 [Task submitter] INFO nextflow.Session - [d4/63389b] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (205) Nov-08 18:18:49.766 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (206) > jobId: 21958486; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ac/28e06890a5f2a814b0836a2b5acc9b Nov-08 18:18:49.766 [Task submitter] INFO nextflow.Session - [ac/28e068] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (206) Nov-08 18:18:50.762 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (207) > jobId: 21958487; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/0f/f64bc45381faec20b82b428d1f4d3c Nov-08 18:18:50.762 [Task submitter] INFO nextflow.Session - [0f/f64bc4] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (207) Nov-08 18:18:51.907 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (208) > jobId: 21958493; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/57/f489a691537b1f871a6f535f9e4e71 Nov-08 18:18:51.907 [Task submitter] INFO nextflow.Session - [57/f489a6] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (208) Nov-08 18:18:52.773 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (209) > jobId: 21958494; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/8a/c913af28ccb3f53dce721e167a2d67 Nov-08 18:18:52.773 [Task submitter] INFO nextflow.Session - [8a/c913af] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (209) Nov-08 18:18:53.768 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (210) > jobId: 21958495; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/4d/885fa7c1314cd9e9ac21b14c63e48b Nov-08 18:18:53.768 [Task submitter] INFO nextflow.Session - [4d/885fa7] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (210) Nov-08 18:18:54.955 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (211) > jobId: 21958496; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/0c/f38db2758f2bec4f719533a4d17ad1 Nov-08 18:18:54.955 [Task submitter] INFO nextflow.Session - [0c/f38db2] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (211) Nov-08 18:18:55.771 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (212) > jobId: 21958497; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/88/08a3f9018bdc12556b42588930249f Nov-08 18:18:55.771 [Task submitter] INFO nextflow.Session - [88/08a3f9] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (212) Nov-08 18:19:50.717 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958123; id: 354; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (133); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/dc/48a571a34ee2d76742076219157fbc started: 1731118790711; exited: 2024-11-09T02:19:50.596905955Z; ] Nov-08 18:19:50.761 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958124; id: 382; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (161); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/68/58e0c72879ee1734e1e08900b99bcd started: 1731118790750; exited: 2024-11-09T02:19:50.541528089Z; ] Nov-08 18:19:51.436 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958151; id: 405; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (184); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/b2/41338a9f23a1b516d9a5934a58dd92 started: 1731118791431; exited: 2024-11-09T02:19:51.167128785Z; ] Nov-08 18:19:51.447 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958152; id: 406; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (185); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/de/e8a4d1fd5b3ba36afbb6316e205aad started: 1731118791443; exited: 2024-11-09T02:19:51.428668957Z; ] Nov-08 18:19:51.460 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958153; id: 407; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (186); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/6f/7aa44da533bde75e95837ca3c2400a started: 1731118791457; exited: 2024-11-09T02:19:50.972904999Z; ] Nov-08 18:19:51.482 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958175; id: 408; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (187); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/22/3f902af82b59eb1c6052a4fba25a3c started: 1731118791473; exited: 2024-11-09T02:19:50.984360469Z; ] Nov-08 18:19:51.499 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958176; id: 409; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (188); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/c0/5c94b7fd015c9cf27ba2caae949e1c started: 1731118791496; exited: 2024-11-09T02:19:51.007181334Z; ] Nov-08 18:19:51.623 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958265; id: 244; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (23); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/a8/dec79db474e5866888c0775b83cc3d started: 1731118791619; exited: 2024-11-09T02:19:51.079230426Z; ] Nov-08 18:19:51.679 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958269; id: 245; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (24); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/b5/f14a4c2b59a05723cecfaf8a8c6072 started: 1731118791652; exited: 2024-11-09T02:19:51.013332473Z; ] Nov-08 18:19:51.689 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958270; id: 246; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (25); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/8c/a6d4b02d325a8f22e1d048bc4a431b started: 1731118791685; exited: 2024-11-09T02:19:51.006851693Z; ] Nov-08 18:19:51.709 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958271; id: 248; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (27); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/45/0ffc39723cbbcf7d31ad69925d82d3 started: 1731118791705; exited: 2024-11-09T02:19:50.99601458Z; ] Nov-08 18:19:55.392 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958118; id: 350; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (129); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/c0/e4a1f84a4e53a22e5076d39c11a79b started: 1731118790416; exited: 2024-11-09T02:19:51.845245155Z; ] Nov-08 18:19:55.454 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958119; id: 351; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (130); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/4e/68c7a7a9d444df413d2e0a336e7211 started: 1731118790464; exited: 2024-11-09T02:19:51.844213946Z; ] Nov-08 18:19:55.540 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958120; id: 353; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (132); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d3/a90d33ba694965076f0aaff7a163d6 started: 1731118790534; exited: 2024-11-09T02:19:51.784092138Z; ] Nov-08 18:19:55.606 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958121; id: 352; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (131); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/91/b8f5a3b287268a7dd2a783d7103ab0 started: 1731118790601; exited: 2024-11-09T02:19:51.907274917Z; ] Nov-08 18:19:55.635 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958122; id: 355; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (134); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d2/aab5cf4990ede67b30b2ae1e4a14e8 started: 1731118790680; exited: 2024-11-09T02:19:51.966209384Z; ] Nov-08 18:19:55.648 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958125; id: 383; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (162); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d5/345807989a9dabd6ef4ea5e3a42679 started: 1731118790786; exited: 2024-11-09T02:19:51.410469593Z; ] Nov-08 18:19:55.658 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958126; id: 384; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (163); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/0e/04f2e55977c357f2e4c027ce2faa20 started: 1731118790819; exited: 2024-11-09T02:19:51.397877219Z; ] Nov-08 18:19:55.679 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958127; id: 386; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (165); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/17/608806271228085661c925a03ff815 started: 1731118790857; exited: 2024-11-09T02:19:51.359372304Z; ] Nov-08 18:19:55.699 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958128; id: 385; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (164); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/c7/38ffa5d1b8a32c5a59116c4c13a7a4 started: 1731118790868; exited: 2024-11-09T02:19:51.112903452Z; ] Nov-08 18:19:55.714 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958129; id: 387; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (166); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/e7/7d135de33642eb4db8f1c50024bbdf started: 1731118790874; exited: 2024-11-09T02:19:51.12484343Z; ] Nov-08 18:19:55.738 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958130; id: 388; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (167); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/a3/5072e27cc1917d9cae237a8ab445ec started: 1731118790884; exited: 2024-11-09T02:19:51.143023269Z; ] Nov-08 18:19:55.761 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958131; id: 389; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (168); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/26/64258fc49977f900c02073139be2ab started: 1731118790893; exited: 2024-11-09T02:19:51.200042266Z; ] Nov-08 18:19:55.782 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958132; id: 390; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (169); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/e7/4f7a1443f6e1dbc557673533bfa7cd started: 1731118790900; exited: 2024-11-09T02:19:51.133000198Z; ] Nov-08 18:19:55.793 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958133; id: 391; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (170); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/08/7d6e032913a56ae50893a76fb02e74 started: 1731118790913; exited: 2024-11-09T02:19:51.095149616Z; ] Nov-08 18:19:55.818 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958134; id: 392; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (171); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/3d/462408f9246e5e6a92a25e8e9e0473 started: 1731118790919; exited: 2024-11-09T02:19:51.094814018Z; ] Nov-08 18:19:55.827 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958135; id: 393; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (172); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/44/78d9ad91171ed1bea4e763db46b3c2 started: 1731118790925; exited: 2024-11-09T02:19:51.094909981Z; ] Nov-08 18:19:55.839 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958136; id: 394; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (173); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/84/a715850842dfa7fc1c5f9e8c485433 started: 1731118790934; exited: 2024-11-09T02:19:51.090671874Z; ] Nov-08 18:19:55.851 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958137; id: 395; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (174); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/68/2a7c962973aeca12cc57976a5ebb76 started: 1731118790942; exited: 2024-11-09T02:19:51.091340109Z; ] Nov-08 18:19:55.862 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958138; id: 397; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (176); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/6f/95838c28d7f5588713bbbd5c64c1b4 started: 1731118790949; exited: 2024-11-09T02:19:51.861819852Z; ] Nov-08 18:19:55.883 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958139; id: 398; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (177); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/5b/6d6e48a9ce4344900b53eb81992927 started: 1731118790964; exited: 2024-11-09T02:19:51.876939814Z; ] Nov-08 18:19:55.899 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958144; id: 396; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (175); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/0f/2c29cb73703ebba25dc101102166f1 started: 1731118790974; exited: 2024-11-09T02:19:51.345987439Z; ] Nov-08 18:19:55.912 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958145; id: 399; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (178); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/0b/6736a6d272886499c562fcf74f4650 started: 1731118790983; exited: 2024-11-09T02:19:51.367259616Z; ] Nov-08 18:19:55.924 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958146; id: 400; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (179); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/a7/461ab2bd252ba3321bc80ba8aa2dfb started: 1731118790991; exited: 2024-11-09T02:19:51.346183949Z; ] Nov-08 18:19:55.930 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958147; id: 402; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (181); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/86/afbb20bd9e048b473d5dcdca367b6d started: 1731118791022; exited: 2024-11-09T02:19:51.114087535Z; ] Nov-08 18:19:55.974 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958148; id: 401; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (180); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/15/3bff2d4b850c79c896a8575ebeae0b started: 1731118791058; exited: 2024-11-09T02:19:51.423746901Z; ] Nov-08 18:19:56.062 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958149; id: 403; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (182); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/1a/bb6f3ef312f8245b6bc1476adbc872 started: 1731118791066; exited: 2024-11-09T02:19:51.423256887Z; ] Nov-08 18:19:56.143 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958150; id: 404; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (183); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/f3/74e6ea23f27d6addb30619d3f68dd0 started: 1731118791329; exited: 2024-11-09T02:19:51.43624453Z; ] Nov-08 18:19:56.153 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958187; id: 135; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993925); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/71/6a9bd88a4ab0b2a174f6e84ad365c5 started: 1731118791508; exited: 2024-11-09T02:19:53.044277778Z; ] Nov-08 18:19:56.166 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958209; id: 136; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993926); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/0f/21c8c0f7ced0e39abe08975ca6c627 started: 1731118791520; exited: 2024-11-09T02:19:53.03983813Z; ] Nov-08 18:19:56.171 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958217; id: 137; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993927); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/b7/6d7f4b2bbd923b123f0deb1439f1bd started: 1731118791529; exited: 2024-11-09T02:19:53.231812735Z; ] Nov-08 18:19:56.175 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958218; id: 138; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993928); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/1b/1a7aff58a6f72f47085e5a13a0de3f started: 1731118791544; exited: 2024-11-09T02:19:53.292307023Z; ] Nov-08 18:19:56.178 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958219; id: 139; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993929); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/59/1bca14c982b68344cb292761ebebfa started: 1731118791554; exited: 2024-11-09T02:19:53.25096435Z; ] Nov-08 18:19:56.189 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958220; id: 140; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993930); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/5c/f94ee39431394dc69b6fe80af9312e started: 1731118791560; exited: 2024-11-09T02:19:53.292574134Z; ] Nov-08 18:19:56.210 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958226; id: 142; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856650); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/66/3588917ed098bd391c6517378bdd1c started: 1731118791565; exited: 2024-11-09T02:19:53.129690819Z; ] Nov-08 18:19:56.231 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958246; id: 141; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR10993931); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/4f/a3fee0c5e430a6adfed6b4c0d11a48 started: 1731118791594; exited: 2024-11-09T02:19:53.052974718Z; ] Nov-08 18:19:56.258 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958264; id: 143; name: NFCORE_FETCHNGS:SRA:SRA_IDS_TO_RUNINFO (SRR8856651); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/15/562bb658535b237c48f865cbb89be8 started: 1731118791606; exited: 2024-11-09T02:19:53.050903794Z; ] Nov-08 18:19:56.274 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958428; id: 410; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (189); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/0f/7d9c6ec876a2f72e7e5eaa96a68b3d started: 1731118791718; exited: 2024-11-09T02:19:52.758951302Z; ] Nov-08 18:19:56.290 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958429; id: 411; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (190); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/41/dadfe4bb1075e4ae1aef73fb2902b6 started: 1731118791729; exited: 2024-11-09T02:19:52.758208269Z; ] Nov-08 18:19:56.302 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958430; id: 413; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (192); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/5e/d4c31e14a5f0c9af0432756d6a2a51 started: 1731118791738; exited: 2024-11-09T02:19:52.759018874Z; ] Nov-08 18:19:56.547 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (213) > jobId: 21958499; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/3a/c89edc3b4b97ce35166656b83dd9c8 Nov-08 18:19:56.547 [Task submitter] INFO nextflow.Session - [3a/c89edc] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (213) Nov-08 18:19:56.770 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (214) > jobId: 21958500; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/10/cbf42c3a90730604835dd9575887ca Nov-08 18:19:56.770 [Task submitter] INFO nextflow.Session - [10/cbf42c] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (214) Nov-08 18:19:57.372 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (216) > jobId: 21958501; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/b5/a9f6a51bdc69ab80ba12037e77876f Nov-08 18:19:57.373 [Task submitter] INFO nextflow.Session - [b5/a9f6a5] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (216) Nov-08 18:19:58.350 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (217) > jobId: 21958502; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/09/95621b0e01776154eee202b137998f Nov-08 18:19:58.350 [Task submitter] INFO nextflow.Session - [09/95621b] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (217) Nov-08 18:19:59.345 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (215) > jobId: 21958503; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/e1/93c038b9697cf968f0044d1d6c1f26 Nov-08 18:19:59.345 [Task submitter] INFO nextflow.Session - [e1/93c038] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (215) Nov-08 18:20:00.349 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (218) > jobId: 21958506; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/8f/b026c730b5985b14fba932d7bdf26d Nov-08 18:20:00.349 [Task submitter] INFO nextflow.Session - [8f/b026c7] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (218) Nov-08 18:20:01.336 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (219) > jobId: 21958507; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/57/f81df20abb01a7dbfc871f27b6c6d9 Nov-08 18:20:01.336 [Task submitter] INFO nextflow.Session - [57/f81df2] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (219) Nov-08 18:20:02.340 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (220) > jobId: 21958508; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/e6/bde8d97fc14035e21eeec2b8e4f340 Nov-08 18:20:02.340 [Task submitter] INFO nextflow.Session - [e6/bde8d9] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (220) Nov-08 18:20:03.339 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (221) > jobId: 21958510; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ae/8723ca3894de155f0324d85c07efb0 Nov-08 18:20:03.339 [Task submitter] INFO nextflow.Session - [ae/8723ca] Submitted process > NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (221) Nov-08 18:20:35.474 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958432; id: 414; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (193); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/b1/bcdb45ad7672e229e584fba879aa6d started: 1731118835451; exited: 2024-11-09T02:20:35.050053105Z; ] Nov-08 18:20:35.557 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958433; id: 415; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (194); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/50/11bbbd050d1d2ea8b3fdb2c4123fad started: 1731118835523; exited: 2024-11-09T02:20:35.463164923Z; ] Nov-08 18:20:35.678 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958434; id: 416; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (195); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/12/aa148005536072dac4c8c075ace94f started: 1731118835630; exited: 2024-11-09T02:20:35.044778659Z; ] Nov-08 18:20:35.798 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958435; id: 417; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (196); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ae/ad4477d3223ea7460a149b18e53fa1 started: 1731118835751; exited: 2024-11-09T02:20:35.431286669Z; ] Nov-08 18:20:35.933 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958436; id: 418; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (197); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/7d/0cf939085877d07c07a327631cb110 started: 1731118835889; exited: 2024-11-09T02:20:35.259196446Z; ] Nov-08 18:21:05.417 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958431; id: 412; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (191); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/94/842c4722cc12daa130680cdd24342c started: 1731118835404; exited: 2024-11-09T02:21:03.143132375Z; ] Nov-08 18:22:40.517 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958474; id: 425; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (204); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/5e/73656d84a04078c3fe47c68c0bbcab started: 1731118960493; exited: 2024-11-09T02:22:39.876135648Z; ] Nov-08 18:22:40.614 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958485; id: 426; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (205); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d4/63389bb2103bb79d4f565489438744 started: 1731118960586; exited: 2024-11-09T02:22:39.902152611Z; ] Nov-08 18:22:40.709 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958486; id: 427; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (206); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ac/28e06890a5f2a814b0836a2b5acc9b started: 1731118960689; exited: 2024-11-09T02:22:40.390276531Z; ] Nov-08 18:22:40.809 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958487; id: 428; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (207); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/0f/f64bc45381faec20b82b428d1f4d3c started: 1731118960779; exited: 2024-11-09T02:22:39.906170623Z; ] Nov-08 18:22:40.860 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958493; id: 429; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (208); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/57/f489a691537b1f871a6f535f9e4e71 started: 1731118960849; exited: 2024-11-09T02:22:39.863938362Z; ] Nov-08 18:22:40.875 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958494; id: 430; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (209); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/8a/c913af28ccb3f53dce721e167a2d67 started: 1731118960871; exited: 2024-11-09T02:22:38.950853523Z; ] Nov-08 18:22:40.887 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958495; id: 431; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (210); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/4d/885fa7c1314cd9e9ac21b14c63e48b started: 1731118960885; exited: 2024-11-09T02:22:38.924848613Z; ] Nov-08 18:22:40.944 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958496; id: 432; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (211); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/0c/f38db2758f2bec4f719533a4d17ad1 started: 1731118960926; exited: 2024-11-09T02:22:39.745747462Z; ] Nov-08 18:22:41.006 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958497; id: 433; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (212); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/88/08a3f9018bdc12556b42588930249f started: 1731118960984; exited: 2024-11-09T02:22:39.712273039Z; ] Nov-08 18:22:41.076 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958499; id: 434; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (213); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/3a/c89edc3b4b97ce35166656b83dd9c8 started: 1731118961054; exited: 2024-11-09T02:22:39.732400164Z; ] Nov-08 18:22:41.096 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958500; id: 435; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (214); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/10/cbf42c3a90730604835dd9575887ca started: 1731118961091; exited: 2024-11-09T02:22:39.578437856Z; ] Nov-08 18:22:41.110 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958501; id: 437; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (216); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/b5/a9f6a51bdc69ab80ba12037e77876f started: 1731118961107; exited: 2024-11-09T02:22:39.592061672Z; ] Nov-08 18:22:41.127 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958502; id: 438; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (217); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/09/95621b0e01776154eee202b137998f started: 1731118961124; exited: 2024-11-09T02:22:39.561077197Z; ] Nov-08 18:22:41.145 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958503; id: 436; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (215); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/e1/93c038b9697cf968f0044d1d6c1f26 started: 1731118961136; exited: 2024-11-09T02:22:39.583679717Z; ] Nov-08 18:22:41.160 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958506; id: 439; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (218); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/8f/b026c730b5985b14fba932d7bdf26d started: 1731118961156; exited: 2024-11-09T02:22:39.975483224Z; ] Nov-08 18:22:41.170 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958507; id: 440; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (219); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/57/f81df20abb01a7dbfc871f27b6c6d9 started: 1731118961167; exited: 2024-11-09T02:22:39.448499113Z; ] Nov-08 18:22:41.182 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958508; id: 441; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (220); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/e6/bde8d97fc14035e21eeec2b8e4f340 started: 1731118961178; exited: 2024-11-09T02:22:39.583886837Z; ] Nov-08 18:22:41.206 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958510; id: 442; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (221); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ae/8723ca3894de155f0324d85c07efb0 started: 1731118961197; exited: 2024-11-09T02:22:40.412639112Z; ] Nov-08 18:22:45.370 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958437; id: 419; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (198); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d4/67654f2da15bf599c7f4f4e87dd70b started: 1731118960399; exited: 2024-11-09T02:22:41.887993884Z; ] Nov-08 18:22:45.381 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958438; id: 420; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (199); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/6b/5c6d2f4a274c9752b9ac8469aab4f7 started: 1731118960406; exited: 2024-11-09T02:22:41.904590514Z; ] Nov-08 18:22:45.392 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958439; id: 421; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (200); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/0f/02e1aa5867cd1c489179a17c2c728b started: 1731118960411; exited: 2024-11-09T02:22:41.891249088Z; ] Nov-08 18:22:45.401 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958440; id: 422; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (201); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/6d/8d1e0a1c604efb2087c4447e73e4fa started: 1731118960416; exited: 2024-11-09T02:22:41.894368157Z; ] Nov-08 18:22:45.407 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958462; id: 423; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (202); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/41/3c35f1b828cf21b33c60834e8abbea started: 1731118960424; exited: 2024-11-09T02:22:41.910398803Z; ] Nov-08 18:22:45.413 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958473; id: 424; name: NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (203); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/64/078cd2b679e3043a37538c33aee8ee started: 1731118960430; exited: 2024-11-09T02:22:41.893832814Z; ] Nov-08 18:22:45.604 [Actor Thread 46] DEBUG nextflow.container.SingularityCache - Singularity found local store for image=https://depot.galaxyproject.org/singularity/sra-tools:3.0.8--h9f5acd7_0; path=/gscratch/scrubbed/srlab/.apptainer/depot.galaxyproject.org-singularity-sra-tools-3.0.8--h9f5acd7_0.img Nov-08 18:22:45.880 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:CUSTOM_SRATOOLSNCBISETTINGS (ncbi-settings) > jobId: 21958614; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/4c/0064412a38b32a5651a6644ae18294 Nov-08 18:22:45.880 [Task submitter] INFO nextflow.Session - [4c/006441] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:CUSTOM_SRATOOLSNCBISETTINGS (ncbi-settings) Nov-08 18:23:21.090 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > No more task to compute -- The following nodes are still active: [process] NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH status=ACTIVE port 0: (queue) OPEN ; channel: - port 1: (value) OPEN ; channel: ncbi_settings port 2: (value) bound ; channel: certificate port 3: (cntrl) - ; channel: $ [process] NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP status=ACTIVE port 0: (queue) OPEN ; channel: - port 1: (value) OPEN ; channel: ncbi_settings port 2: (value) bound ; channel: certificate port 3: (cntrl) - ; channel: $ [process] NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET status=ACTIVE port 0: (queue) OPEN ; channel: meta port 1: (value) bound ; channel: pipeline port 2: (value) bound ; channel: strandedness port 3: (value) bound ; channel: mapping_fields port 4: (cntrl) - ; channel: $ [process] NFCORE_FETCHNGS:SRA:MULTIQC_MAPPINGS_CONFIG status=ACTIVE port 0: (queue) OPEN ; channel: csv port 1: (cntrl) - ; channel: $ Nov-08 18:23:25.370 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor slurm > tasks to be completed: 1 -- submitted tasks are shown below ~> TaskHandler[jobId: 21958614; id: 443; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:CUSTOM_SRATOOLSNCBISETTINGS (ncbi-settings); status: SUBMITTED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/4c/0064412a38b32a5651a6644ae18294 started: -; exited: 2024-11-09T02:23:24.53645881Z; ] Nov-08 18:23:25.373 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958614; id: 443; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:CUSTOM_SRATOOLSNCBISETTINGS (ncbi-settings); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/4c/0064412a38b32a5651a6644ae18294 started: 1731119005372; exited: 2024-11-09T02:23:24.53645881Z; ] Nov-08 18:23:25.936 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059142) > jobId: 21958643; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/7f/293a6e1301f6afb8e6788a16dd507e Nov-08 18:23:25.936 [Task submitter] INFO nextflow.Session - [7f/293a6e] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059142) Nov-08 18:23:26.295 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059144) > jobId: 21958644; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/38/5686050a902c123cef2f300483bf5c Nov-08 18:23:26.295 [Task submitter] INFO nextflow.Session - [38/568605] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059144) Nov-08 18:23:26.929 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059138) > jobId: 21958646; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/de/931b5d28714ae8d33284533bd38d17 Nov-08 18:23:26.929 [Task submitter] INFO nextflow.Session - [de/931b5d] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059138) Nov-08 18:23:28.041 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059139) > jobId: 21958647; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/c8/f34fe348d3215980dba9ecf74daf73 Nov-08 18:23:28.041 [Task submitter] INFO nextflow.Session - [c8/f34fe3] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059139) Nov-08 18:23:28.616 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059149) > jobId: 21958648; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/f6/6521e3f9cbd8d10fb1b65bbc1b3705 Nov-08 18:23:28.616 [Task submitter] INFO nextflow.Session - [f6/6521e3] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059149) Nov-08 18:23:29.632 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059150) > jobId: 21958652; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/52/6c610967aa6de518ed7c264b77601e Nov-08 18:23:29.632 [Task submitter] INFO nextflow.Session - [52/6c6109] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059150) Nov-08 18:23:30.602 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059155) > jobId: 21958658; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/0d/abde0ac78431c93edc2cb34f0dcb13 Nov-08 18:23:30.602 [Task submitter] INFO nextflow.Session - [0d/abde0a] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059155) Nov-08 18:23:31.583 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059151) > jobId: 21958659; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/6d/56df3ce0d00ede46603882f1c17b12 Nov-08 18:23:31.583 [Task submitter] INFO nextflow.Session - [6d/56df3c] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059151) Nov-08 18:23:32.623 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059174) > jobId: 21958660; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/36/ed0272261feeec65e269c1c6d0a330 Nov-08 18:23:32.623 [Task submitter] INFO nextflow.Session - [36/ed0272] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059174) Nov-08 18:23:33.809 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059141) > jobId: 21958661; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/51/529cb18a028b631a4030cf1a5c264f Nov-08 18:23:33.809 [Task submitter] INFO nextflow.Session - [51/529cb1] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059141) Nov-08 18:23:34.596 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059173) > jobId: 21958662; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/15/1fc6278612451f054957b6b8f4b369 Nov-08 18:23:34.596 [Task submitter] INFO nextflow.Session - [15/1fc627] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059173) Nov-08 18:23:35.639 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059172) > jobId: 21958663; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/f9/a4880938c195ef418493105432f431 Nov-08 18:23:35.639 [Task submitter] INFO nextflow.Session - [f9/a48809] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059172) Nov-08 18:23:36.585 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059140) > jobId: 21958664; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/e5/ae91b62f88400525f901047e4a4647 Nov-08 18:23:36.585 [Task submitter] INFO nextflow.Session - [e5/ae91b6] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059140) Nov-08 18:23:37.611 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059177) > jobId: 21958665; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/99/c4b3da562bf7bd4595bda13bd48749 Nov-08 18:23:37.611 [Task submitter] INFO nextflow.Session - [99/c4b3da] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059177) Nov-08 18:23:38.644 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059186) > jobId: 21958666; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/0c/115468909a9109b9a5c073f468a41e Nov-08 18:23:38.644 [Task submitter] INFO nextflow.Session - [0c/115468] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059186) Nov-08 18:23:39.622 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059187) > jobId: 21958667; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/10/bcd25d2f7a62fae396b70ebd9645fc Nov-08 18:23:39.622 [Task submitter] INFO nextflow.Session - [10/bcd25d] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059187) Nov-08 18:23:40.621 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059176) > jobId: 21958669; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/60/2f2164e4176c59a9f7397eb1450ed5 Nov-08 18:23:40.621 [Task submitter] INFO nextflow.Session - [60/2f2164] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059176) Nov-08 18:23:41.591 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059175) > jobId: 21958670; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/bf/f5ccffa6ddfb151c475f6b85161afa Nov-08 18:23:41.591 [Task submitter] INFO nextflow.Session - [bf/f5ccff] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059175) Nov-08 18:23:42.615 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995881) > jobId: 21958671; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d0/dc2112aebe2c2570b67b9781a013fc Nov-08 18:23:42.615 [Task submitter] INFO nextflow.Session - [d0/dc2112] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995881) Nov-08 18:23:43.630 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995880) > jobId: 21958672; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/bd/a1851f42c27cd3137afdbe4baa9c3a Nov-08 18:23:43.631 [Task submitter] INFO nextflow.Session - [bd/a1851f] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995880) Nov-08 18:23:44.586 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995882) > jobId: 21958673; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/50/981f8dc3586f25bd1afcd44ac22738 Nov-08 18:23:44.586 [Task submitter] INFO nextflow.Session - [50/981f8d] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995882) Nov-08 18:23:45.606 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995883) > jobId: 21958674; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/2e/767de2a757d296cb38a02f1a09809a Nov-08 18:23:45.606 [Task submitter] INFO nextflow.Session - [2e/767de2] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995883) Nov-08 18:23:46.612 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995884) > jobId: 21958676; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/64/f59671c01c10e99c4bd14acd55cdea Nov-08 18:23:46.612 [Task submitter] INFO nextflow.Session - [64/f59671] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995884) Nov-08 18:23:47.604 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995887) > jobId: 21958677; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/4e/1de9238e6b8a72f335f86b1917be24 Nov-08 18:23:47.604 [Task submitter] INFO nextflow.Session - [4e/1de923] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995887) Nov-08 18:23:48.602 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995888) > jobId: 21958678; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/f9/37151dba811069685319fbcf22f0c6 Nov-08 18:23:48.602 [Task submitter] INFO nextflow.Session - [f9/37151d] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995888) Nov-08 18:23:49.587 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059168) > jobId: 21958679; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/c3/57a29f3fdd7b7e8c30ff928d32c7a8 Nov-08 18:23:49.587 [Task submitter] INFO nextflow.Session - [c3/57a29f] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059168) Nov-08 18:23:50.597 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995886) > jobId: 21958680; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/34/de61a72cdd2f88b1778ee862c6a505 Nov-08 18:23:50.597 [Task submitter] INFO nextflow.Session - [34/de61a7] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995886) Nov-08 18:23:53.573 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995892) > jobId: 21958681; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ee/3b739995caac0929e3cf784cbf7ef7 Nov-08 18:23:53.573 [Task submitter] INFO nextflow.Session - [ee/3b7399] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995892) Nov-08 18:23:53.701 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995893) > jobId: 21958682; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/0c/46a32efe05abc87b4866210246021c Nov-08 18:23:53.701 [Task submitter] INFO nextflow.Session - [0c/46a32e] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995893) Nov-08 18:23:53.836 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995889) > jobId: 21958683; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/0b/3c29c654d426036a3e06d56948d46c Nov-08 18:23:53.836 [Task submitter] INFO nextflow.Session - [0b/3c29c6] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995889) Nov-08 18:23:56.176 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995890) > jobId: 21958684; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ab/358a541bfb3877ff51503af7df177a Nov-08 18:23:56.176 [Task submitter] INFO nextflow.Session - [ab/358a54] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995890) Nov-08 18:23:56.410 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995897) > jobId: 21958688; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/f2/926e4a79a6b5d15a0f8e57ad4fa6eb Nov-08 18:23:56.411 [Task submitter] INFO nextflow.Session - [f2/926e4a] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995897) Nov-08 18:23:58.779 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995896) > jobId: 21958689; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/6f/146827be9c275a7091e555b696a9f2 Nov-08 18:23:58.779 [Task submitter] INFO nextflow.Session - [6f/146827] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995896) Nov-08 18:23:59.022 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995894) > jobId: 21958690; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/1e/592760ac66ce5bed511529bd5f755a Nov-08 18:23:59.022 [Task submitter] INFO nextflow.Session - [1e/592760] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995894) Nov-08 18:24:01.442 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995895) > jobId: 21958691; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ee/976d1f19f362388a18eba5ed1246cb Nov-08 18:24:01.442 [Task submitter] INFO nextflow.Session - [ee/976d1f] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995895) Nov-08 18:24:01.621 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995898) > jobId: 21958692; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/7a/5aff6c7006aacb7c73b578c772313c Nov-08 18:24:01.621 [Task submitter] INFO nextflow.Session - [7a/5aff6c] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995898) Nov-08 18:24:01.788 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995900) > jobId: 21958693; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/fa/2e3ac07d8a921c9e02ca1616cde1f5 Nov-08 18:24:01.788 [Task submitter] INFO nextflow.Session - [fa/2e3ac0] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995900) Nov-08 18:24:04.382 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995899) > jobId: 21958698; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/4e/cc18fd007a31843e15aed022b28305 Nov-08 18:24:04.382 [Task submitter] INFO nextflow.Session - [4e/cc18fd] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995899) Nov-08 18:24:04.641 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995901) > jobId: 21958699; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d2/dda0950f4b6761fcd81734613152e8 Nov-08 18:24:04.641 [Task submitter] INFO nextflow.Session - [d2/dda095] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995901) Nov-08 18:24:04.868 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995903) > jobId: 21958700; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/c2/00806e531ec814c79c4eb6d18489c0 Nov-08 18:24:04.868 [Task submitter] INFO nextflow.Session - [c2/00806e] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995903) Nov-08 18:24:05.591 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995907) > jobId: 21958701; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/7b/cd852ef5797784cb7833fc9ada0df5 Nov-08 18:24:05.592 [Task submitter] INFO nextflow.Session - [7b/cd852e] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995907) Nov-08 18:24:06.594 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995909) > jobId: 21958702; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/31/a3f0d8fe4a7848ec0840a557d943e4 Nov-08 18:24:06.594 [Task submitter] INFO nextflow.Session - [31/a3f0d8] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995909) Nov-08 18:24:07.571 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995906) > jobId: 21958703; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/37/135b0ba717bee552d253c820a17455 Nov-08 18:24:07.571 [Task submitter] INFO nextflow.Session - [37/135b0b] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995906) Nov-08 18:24:08.590 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995911) > jobId: 21958704; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/56/a9d1432914588a9eb1940d631382d6 Nov-08 18:24:08.590 [Task submitter] INFO nextflow.Session - [56/a9d143] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995911) Nov-08 18:24:09.603 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995912) > jobId: 21958705; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/c8/63c2d40f8aa3048540f98f287e5c33 Nov-08 18:24:09.603 [Task submitter] INFO nextflow.Session - [c8/63c2d4] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995912) Nov-08 18:24:10.588 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995910) > jobId: 21958706; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/9b/a797362760f0ec0fae2f1bea4508af Nov-08 18:24:10.588 [Task submitter] INFO nextflow.Session - [9b/a79736] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995910) Nov-08 18:24:11.657 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059152) > jobId: 21958713; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/22/21b008f0d6e92f0ed1250891bdab56 Nov-08 18:24:11.657 [Task submitter] INFO nextflow.Session - [22/21b008] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059152) Nov-08 18:24:12.584 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993896) > jobId: 21958714; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/3e/21bd2d2826fd4ff7ed0d3738b20a9c Nov-08 18:24:12.584 [Task submitter] INFO nextflow.Session - [3e/21bd2d] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993896) Nov-08 18:24:13.612 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995904) > jobId: 21958719; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/aa/0ad615ec37e77734595abd763436d0 Nov-08 18:24:13.612 [Task submitter] INFO nextflow.Session - [aa/0ad615] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995904) Nov-08 18:24:14.598 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059153) > jobId: 21958720; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/42/fc52459ab48a4c4239d4938fa2d64b Nov-08 18:24:14.598 [Task submitter] INFO nextflow.Session - [42/fc5245] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059153) Nov-08 18:24:15.591 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995902) > jobId: 21958721; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/2f/22c23a946fc43d954ac6b9b8043d63 Nov-08 18:24:15.592 [Task submitter] INFO nextflow.Session - [2f/22c23a] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995902) Nov-08 18:24:16.719 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059143) > jobId: 21958723; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/95/bbb75b128477ad01f84a84eade976c Nov-08 18:24:16.719 [Task submitter] INFO nextflow.Session - [95/bbb75b] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059143) Nov-08 18:24:17.608 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059171) > jobId: 21958724; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/28/5a07a8913e6511e3e75bc80cf9c935 Nov-08 18:24:17.608 [Task submitter] INFO nextflow.Session - [28/5a07a8] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059171) Nov-08 18:24:18.609 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059169) > jobId: 21958725; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/23/a90ceae98a3f17d3cd5831359f57fb Nov-08 18:24:18.609 [Task submitter] INFO nextflow.Session - [23/a90cea] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059169) Nov-08 18:24:19.689 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059180) > jobId: 21958727; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/8e/80e6d78b3ae0e75c543dd685809a4d Nov-08 18:24:19.689 [Task submitter] INFO nextflow.Session - [8e/80e6d7] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059180) Nov-08 18:24:20.596 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059170) > jobId: 21958728; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/bd/cf6cc3d94b45db7391d423a295d2fb Nov-08 18:24:20.596 [Task submitter] INFO nextflow.Session - [bd/cf6cc3] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059170) Nov-08 18:24:21.708 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059181) > jobId: 21958733; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/5b/8417683dd672d0c7e944397e58e62e Nov-08 18:24:21.708 [Task submitter] INFO nextflow.Session - [5b/841768] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059181) Nov-08 18:24:22.746 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059182) > jobId: 21958738; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/54/9a21aa768bb7874343d14f7d6e266b Nov-08 18:24:22.746 [Task submitter] INFO nextflow.Session - [54/9a21aa] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059182) Nov-08 18:24:23.576 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059183) > jobId: 21958739; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/85/4552705bccc553cbaddf4bf6b2d7c2 Nov-08 18:24:23.576 [Task submitter] INFO nextflow.Session - [85/455270] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059183) Nov-08 18:24:24.599 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059184) > jobId: 21958741; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d8/09c4fcacba5c2567f9207458d70fb2 Nov-08 18:24:24.599 [Task submitter] INFO nextflow.Session - [d8/09c4fc] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059184) Nov-08 18:24:25.596 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059178) > jobId: 21958742; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/2f/6ee29e277db2bdce1b504bed5c813d Nov-08 18:24:25.597 [Task submitter] INFO nextflow.Session - [2f/6ee29e] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059178) Nov-08 18:24:26.619 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059185) > jobId: 21958743; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/79/f58038d7efb100e90162d1ecf0e2fc Nov-08 18:24:26.620 [Task submitter] INFO nextflow.Session - [79/f58038] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059185) Nov-08 18:24:27.582 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059137) > jobId: 21958744; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/47/5c768ddd81b3bdec9e0b6c560e2ab4 Nov-08 18:24:27.582 [Task submitter] INFO nextflow.Session - [47/5c768d] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059137) Nov-08 18:24:28.578 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993893) > jobId: 21958745; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/3a/ea368580529d936f02147888cea405 Nov-08 18:24:28.578 [Task submitter] INFO nextflow.Session - [3a/ea3685] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993893) Nov-08 18:24:29.611 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059179) > jobId: 21958746; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/9b/6d5ee7f1aa3fe485ab8c2fdcfa18bb Nov-08 18:24:29.611 [Task submitter] INFO nextflow.Session - [9b/6d5ee7] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059179) Nov-08 18:24:30.594 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993894) > jobId: 21958747; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/4a/d1568bb3d448473d83dcf768569a30 Nov-08 18:24:30.594 [Task submitter] INFO nextflow.Session - [4a/d1568b] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993894) Nov-08 18:24:31.567 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993892) > jobId: 21958748; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/72/2a2f042f019c8961f9216a5e1a47dd Nov-08 18:24:31.568 [Task submitter] INFO nextflow.Session - [72/2a2f04] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993892) Nov-08 18:24:32.596 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995875) > jobId: 21958749; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/98/6cbac4d8260d8675d3c943743d6519 Nov-08 18:24:32.597 [Task submitter] INFO nextflow.Session - [98/6cbac4] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995875) Nov-08 18:24:33.589 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993895) > jobId: 21958750; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ab/4a542426f60ec129d570a5d2ef1ec3 Nov-08 18:24:33.589 [Task submitter] INFO nextflow.Session - [ab/4a5424] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993895) Nov-08 18:24:36.609 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993899) > jobId: 21958751; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/41/f820eca9b40c7625d9feda54a20583 Nov-08 18:24:36.609 [Task submitter] INFO nextflow.Session - [41/f820ec] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993899) Nov-08 18:24:36.786 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995876) > jobId: 21958752; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/5e/27b9840549542c52d19696b2a9e696 Nov-08 18:24:36.787 [Task submitter] INFO nextflow.Session - [5e/27b984] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995876) Nov-08 18:24:36.914 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995905) > jobId: 21958753; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/46/d55bdf22436295a63b77037d265567 Nov-08 18:24:36.915 [Task submitter] INFO nextflow.Session - [46/d55bdf] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995905) Nov-08 18:24:39.268 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993897) > jobId: 21958754; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/8d/b9c61d68cfdc9e820e24b8ab910433 Nov-08 18:24:39.268 [Task submitter] INFO nextflow.Session - [8d/b9c61d] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993897) Nov-08 18:24:39.449 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995878) > jobId: 21958757; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/1b/402907889483732d521500a6cc6764 Nov-08 18:24:39.449 [Task submitter] INFO nextflow.Session - [1b/402907] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995878) Nov-08 18:24:41.736 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995877) > jobId: 21958758; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/6b/595e1c0ff07def5d02633e48ef5694 Nov-08 18:24:41.736 [Task submitter] INFO nextflow.Session - [6b/595e1c] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995877) Nov-08 18:24:41.919 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995879) > jobId: 21958760; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/f9/dca64391b4e273a366634e5a29d458 Nov-08 18:24:41.919 [Task submitter] INFO nextflow.Session - [f9/dca643] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995879) Nov-08 18:24:42.119 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995873) > jobId: 21958761; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/56/b326b3b00b305c31b95e6de74d07ce Nov-08 18:24:42.119 [Task submitter] INFO nextflow.Session - [56/b326b3] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995873) Nov-08 18:24:44.249 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995908) > jobId: 21958762; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/2f/70826306066b16b12ab231873c6eec Nov-08 18:24:44.249 [Task submitter] INFO nextflow.Session - [2f/708263] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995908) Nov-08 18:24:44.600 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993898) > jobId: 21958764; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/00/19fcac664ee7766e82aa22d6b8544d Nov-08 18:24:44.600 [Task submitter] INFO nextflow.Session - [00/19fcac] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993898) Nov-08 18:24:46.744 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995885) > jobId: 21958765; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/b8/d5e2549f8dc3c732c97ecd4bfc8e9c Nov-08 18:24:46.744 [Task submitter] INFO nextflow.Session - [b8/d5e254] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995885) Nov-08 18:24:46.935 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993900) > jobId: 21958772; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/c6/03f6e39f345c3379632b8b1c1b7678 Nov-08 18:24:46.935 [Task submitter] INFO nextflow.Session - [c6/03f6e3] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993900) Nov-08 18:24:47.077 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856658) > jobId: 21958773; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/87/d270e827af7cb65e96021f345001a6 Nov-08 18:24:47.077 [Task submitter] INFO nextflow.Session - [87/d270e8] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856658) Nov-08 18:24:48.421 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995891) > jobId: 21958774; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/06/e8604c4497c35bf07b103b99c64e2c Nov-08 18:24:48.421 [Task submitter] INFO nextflow.Session - [06/e8604c] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995891) Nov-08 18:24:49.022 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856653) > jobId: 21958778; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/0e/93f0cc53e88f531b36ceaad1e3f604 Nov-08 18:24:49.022 [Task submitter] INFO nextflow.Session - [0e/93f0cc] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856653) Nov-08 18:24:50.029 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856661) > jobId: 21958779; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/15/80d0f0f3744fff47af762b6fa0c909 Nov-08 18:24:50.030 [Task submitter] INFO nextflow.Session - [15/80d0f0] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856661) Nov-08 18:24:50.913 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856663) > jobId: 21958780; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/8a/59cf56c3ec222d0c8d5b3dc0298610 Nov-08 18:24:50.913 [Task submitter] INFO nextflow.Session - [8a/59cf56] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856663) Nov-08 18:24:51.899 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856662) > jobId: 21958781; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/7f/7e8c9d71e6f9dc95b6bd5c3085d238 Nov-08 18:24:51.899 [Task submitter] INFO nextflow.Session - [7f/7e8c9d] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856662) Nov-08 18:24:52.901 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856665) > jobId: 21958782; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/01/ef8db0358e55f3e5aa2b63821e873d Nov-08 18:24:52.902 [Task submitter] INFO nextflow.Session - [01/ef8db0] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856665) Nov-08 18:24:53.886 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856666) > jobId: 21958785; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/6c/536afdd7e8268f78daaef4ec5d9404 Nov-08 18:24:53.886 [Task submitter] INFO nextflow.Session - [6c/536afd] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856666) Nov-08 18:24:54.878 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856668) > jobId: 21958786; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/84/ff5aa71a737e4bd21453fad7f45590 Nov-08 18:24:54.878 [Task submitter] INFO nextflow.Session - [84/ff5aa7] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856668) Nov-08 18:24:55.901 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856664) > jobId: 21958787; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/84/e97ebdb75b4f5fad831bc0a77a5aaf Nov-08 18:24:55.901 [Task submitter] INFO nextflow.Session - [84/e97ebd] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856664) Nov-08 18:24:56.892 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856669) > jobId: 21958788; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/e0/88b81bc2bc7a22974378640cb43f43 Nov-08 18:24:56.893 [Task submitter] INFO nextflow.Session - [e0/88b81b] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856669) Nov-08 18:24:57.890 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856673) > jobId: 21958789; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/52/7298eacd59a66e61955ac88f3ab0b6 Nov-08 18:24:57.891 [Task submitter] INFO nextflow.Session - [52/7298ea] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856673) Nov-08 18:24:58.892 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856671) > jobId: 21958792; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ad/52beb1a5a4b91d61c533ea0677c922 Nov-08 18:24:58.892 [Task submitter] INFO nextflow.Session - [ad/52beb1] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856671) Nov-08 18:24:59.898 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856674) > jobId: 21958793; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/b9/02e888b4f29c8922c9b4d5a1f711a3 Nov-08 18:24:59.898 [Task submitter] INFO nextflow.Session - [b9/02e888] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856674) Nov-08 18:25:00.891 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856677) > jobId: 21958794; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/37/1999662da1e44a6fb72bcedd37aa9e Nov-08 18:25:00.891 [Task submitter] INFO nextflow.Session - [37/199966] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856677) Nov-08 18:25:01.885 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856675) > jobId: 21958795; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ed/307a144aaf5cff3ecad979025af03d Nov-08 18:25:01.885 [Task submitter] INFO nextflow.Session - [ed/307a14] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856675) Nov-08 18:25:02.855 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856667) > jobId: 21958796; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/3c/3480af999cf01dd2fd8291fb45e511 Nov-08 18:25:02.855 [Task submitter] INFO nextflow.Session - [3c/3480af] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856667) Nov-08 18:25:03.882 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856676) > jobId: 21958797; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/27/5d4caf3584337b8128f8388cf8deb4 Nov-08 18:25:03.882 [Task submitter] INFO nextflow.Session - [27/5d4caf] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856676) Nov-08 18:25:04.879 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856670) > jobId: 21958798; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/cc/17aea6c53c99e6e7e1bcf06991b00b Nov-08 18:25:04.879 [Task submitter] INFO nextflow.Session - [cc/17aea6] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856670) Nov-08 18:25:50.378 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958680; id: 470; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995886); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/34/de61a72cdd2f88b1778ee862c6a505 started: 1731119090642; exited: 2024-11-09T02:25:47.458210191Z; ] Nov-08 18:25:50.425 [Actor Thread 48] DEBUG nextflow.container.SingularityCache - Singularity found local store for image=https://depot.galaxyproject.org/singularity/mulled-v2-5f89fe0cd045cb1d615630b9261a1d17943a9b6a:6a9ff0e76ec016c3d0d27e0c0d362339f2d787e6-0; path=/gscratch/scrubbed/srlab/.apptainer/depot.galaxyproject.org-singularity-mulled-v2-5f89fe0cd045cb1d615630b9261a1d17943a9b6a-6a9ff0e76ec016c3d0d27e0c0d362339f2d787e6-0.img Nov-08 18:25:50.892 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856659) > jobId: 21958824; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/b1/3953087982aacc731805a55459faea Nov-08 18:25:50.892 [Task submitter] INFO nextflow.Session - [b1/395308] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856659) Nov-08 18:25:55.594 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958681; id: 471; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995892); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ee/3b739995caac0929e3cf784cbf7ef7 started: 1731119090650; exited: 2024-11-09T02:25:50.952665001Z; ] Nov-08 18:25:55.877 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856683) > jobId: 21958825; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/c9/b13a49f5ac145aebf2f563b19053cb Nov-08 18:25:55.877 [Task submitter] INFO nextflow.Session - [c9/b13a49] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856683) Nov-08 18:26:00.382 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958672; id: 462; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995880); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/bd/a1851f42c27cd3137afdbe4baa9c3a started: 1731119090577; exited: 2024-11-09T02:25:55.688582859Z; ] Nov-08 18:26:01.676 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856652) > jobId: 21958827; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/31/e3173df19a2a9edffefc71c43ba569 Nov-08 18:26:01.677 [Task submitter] INFO nextflow.Session - [31/e3173d] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856652) Nov-08 18:26:05.383 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958676; id: 466; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995884); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/64/f59671c01c10e99c4bd14acd55cdea started: 1731119090601; exited: 2024-11-09T02:26:00.612777828Z; ] Nov-08 18:26:07.037 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059167) > jobId: 21958828; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/c0/65ad7b06e9ced43175b3e3f6852027 Nov-08 18:26:07.037 [Task submitter] INFO nextflow.Session - [c0/65ad7b] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059167) Nov-08 18:26:10.380 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958673; id: 464; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995882); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/50/981f8dc3586f25bd1afcd44ac22738 started: 1731119095604; exited: 2024-11-09T02:26:05.438675267Z; ] Nov-08 18:26:10.386 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958674; id: 465; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995883); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/2e/767de2a757d296cb38a02f1a09809a started: 1731119090592; exited: 2024-11-09T02:26:06.039259705Z; ] Nov-08 18:26:12.609 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856679) > jobId: 21958829; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/0a/5908d29e90d9332ed1f85f90764fdc Nov-08 18:26:12.609 [Task submitter] INFO nextflow.Session - [0a/5908d2] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856679) Nov-08 18:26:12.902 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430591) > jobId: 21958831; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/f2/068af87bf860d5e53b5db502a039de Nov-08 18:26:12.902 [Task submitter] INFO nextflow.Session - [f2/068af8] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430591) Nov-08 18:26:15.379 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958671; id: 463; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995881); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d0/dc2112aebe2c2570b67b9781a013fc started: 1731119095600; exited: 2024-11-09T02:26:14.491276146Z; ] Nov-08 18:26:15.422 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958684; id: 474; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995890); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ab/358a541bfb3877ff51503af7df177a started: 1731119090673; exited: 2024-11-09T02:26:13.577003726Z; ] Nov-08 18:26:15.431 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958689; id: 477; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995896); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/6f/146827be9c275a7091e555b696a9f2 started: 1731119095611; exited: 2024-11-09T02:26:10.888293111Z; ] Nov-08 18:26:17.822 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430592) > jobId: 21958833; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/6f/c56ff4d797ca67cba3818c22c1a4bf Nov-08 18:26:17.822 [Task submitter] INFO nextflow.Session - [6f/c56ff4] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430592) Nov-08 18:26:18.034 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856654) > jobId: 21958834; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/31/40c009aac9401612af4094e0fa6e4b Nov-08 18:26:18.034 [Task submitter] INFO nextflow.Session - [31/40c009] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856654) Nov-08 18:26:18.412 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430596) > jobId: 21958835; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/17/e1e0edd92ead7d35b77b7bcfb9fa0d Nov-08 18:26:18.412 [Task submitter] INFO nextflow.Session - [17/e1e0ed] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430596) Nov-08 18:26:20.383 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958691; id: 478; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995895); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ee/976d1f19f362388a18eba5ed1246cb started: 1731119090705; exited: 2024-11-09T02:26:19.284956345Z; ] Nov-08 18:26:20.992 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430571) > jobId: 21958836; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/83/f36dbbe784c1900f829988bca257a2 Nov-08 18:26:20.992 [Task submitter] INFO nextflow.Session - [83/f36dbb] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430571) Nov-08 18:26:25.394 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958690; id: 476; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995894); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/1e/592760ac66ce5bed511529bd5f755a started: 1731119095614; exited: 2024-11-09T02:26:23.897003528Z; ] Nov-08 18:26:25.403 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958705; id: 489; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995912); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/c8/63c2d40f8aa3048540f98f287e5c33 started: 1731119095658; exited: 2024-11-09T02:26:23.978813079Z; ] Nov-08 18:26:26.090 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430580) > jobId: 21958838; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/8d/fedbde7dfcd93e5d3a6458244e5bab Nov-08 18:26:26.091 [Task submitter] INFO nextflow.Session - [8d/fedbde] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430580) Nov-08 18:26:26.978 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430577) > jobId: 21958839; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/0e/c90bc34c7c5dc7f7d37e771cd7c73d Nov-08 18:26:26.978 [Task submitter] INFO nextflow.Session - [0e/c90bc3] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430577) Nov-08 18:26:30.378 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958682; id: 473; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995893); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/0c/46a32efe05abc87b4866210246021c started: 1731119090661; exited: 2024-11-09T02:26:27.073751152Z; ] Nov-08 18:26:30.958 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430584) > jobId: 21958840; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ae/ebe67f1107407c72c8a6ad0f63a7ec Nov-08 18:26:30.959 [Task submitter] INFO nextflow.Session - [ae/ebe67f] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430584) Nov-08 18:26:35.384 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958677; id: 467; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995887); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/4e/1de9238e6b8a72f335f86b1917be24 started: 1731119090607; exited: 2024-11-09T02:26:32.784079752Z; ] Nov-08 18:26:35.397 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958692; id: 479; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995898); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/7a/5aff6c7006aacb7c73b578c772313c started: 1731119090711; exited: 2024-11-09T02:26:33.692634419Z; ] Nov-08 18:26:35.411 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958693; id: 481; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995900); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/fa/2e3ac07d8a921c9e02ca1616cde1f5 started: 1731119090721; exited: 2024-11-09T02:26:35.257158486Z; ] Nov-08 18:26:35.416 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958698; id: 480; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995899); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/4e/cc18fd007a31843e15aed022b28305 started: 1731119090729; exited: 2024-11-09T02:26:35.031483342Z; ] Nov-08 18:26:35.452 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958703; id: 487; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995906); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/37/135b0ba717bee552d253c820a17455 started: 1731119095638; exited: 2024-11-09T02:26:33.319739857Z; ] Nov-08 18:26:35.961 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993903) > jobId: 21958841; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/66/e9fd46febc5918e2b6d048f47c0725 Nov-08 18:26:35.961 [Task submitter] INFO nextflow.Session - [66/e9fd46] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993903) Nov-08 18:26:36.962 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993905) > jobId: 21958842; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/fe/a0bea9aeeed0fe21923944f1a2e139 Nov-08 18:26:36.962 [Task submitter] INFO nextflow.Session - [fe/a0bea9] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993905) Nov-08 18:26:37.960 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993904) > jobId: 21958843; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/33/66b53750e5ded2a50631df55ac33fd Nov-08 18:26:37.960 [Task submitter] INFO nextflow.Session - [33/66b537] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993904) Nov-08 18:26:39.026 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993907) > jobId: 21958844; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/53/8c0340615b1afb1300571116c3760e Nov-08 18:26:39.026 [Task submitter] INFO nextflow.Session - [53/8c0340] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993907) Nov-08 18:26:39.953 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993915) > jobId: 21958845; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/fd/83cf411449253a84b75d0fd0853434 Nov-08 18:26:39.953 [Task submitter] INFO nextflow.Session - [fd/83cf41] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993915) Nov-08 18:26:40.381 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958678; id: 468; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995888); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/f9/37151dba811069685319fbcf22f0c6 started: 1731119090619; exited: 2024-11-09T02:26:36.225885124Z; ] Nov-08 18:26:40.401 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958761; id: 520; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995873); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/56/b326b3b00b305c31b95e6de74d07ce started: 1731119135464; exited: 2024-11-09T02:26:38.410234381Z; ] Nov-08 18:26:40.416 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958762; id: 521; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995908); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/2f/70826306066b16b12ab231873c6eec started: 1731119135475; exited: 2024-11-09T02:26:37.091471322Z; ] Nov-08 18:26:40.954 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993913) > jobId: 21958846; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/9e/ba041b2adae0d521ab854640588fae Nov-08 18:26:40.954 [Task submitter] INFO nextflow.Session - [9e/ba041b] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993913) Nov-08 18:26:41.980 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993906) > jobId: 21958847; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/7a/f5a7871de519cd7b6639f46350c696 Nov-08 18:26:41.980 [Task submitter] INFO nextflow.Session - [7a/f5a787] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993906) Nov-08 18:26:42.980 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993923) > jobId: 21958848; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/47/b0cc0a9ce9222fec27dd867bac3a98 Nov-08 18:26:42.981 [Task submitter] INFO nextflow.Session - [47/b0cc0a] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993923) Nov-08 18:26:45.378 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958683; id: 472; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995889); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/0b/3c29c654d426036a3e06d56948d46c started: 1731119090668; exited: 2024-11-09T02:26:40.800984732Z; ] Nov-08 18:26:45.385 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958688; id: 475; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995897); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/f2/926e4a79a6b5d15a0f8e57ad4fa6eb started: 1731119090685; exited: 2024-11-09T02:26:44.379161885Z; ] Nov-08 18:26:45.404 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958719; id: 492; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995904); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/aa/0ad615ec37e77734595abd763436d0 started: 1731119095697; exited: 2024-11-09T02:26:43.441461698Z; ] Nov-08 18:26:45.433 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958757; id: 518; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995878); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/1b/402907889483732d521500a6cc6764 started: 1731119135444; exited: 2024-11-09T02:26:44.068750179Z; ] Nov-08 18:26:45.438 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958774; id: 525; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995891); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/06/e8604c4497c35bf07b103b99c64e2c started: 1731119130548; exited: 2024-11-09T02:26:41.990533637Z; ] Nov-08 18:26:45.956 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993909) > jobId: 21958849; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/2d/6310cb5e7263532239efaedf8d7d3e Nov-08 18:26:45.956 [Task submitter] INFO nextflow.Session - [2d/6310cb] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993909) Nov-08 18:26:46.965 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993911) > jobId: 21958850; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/cb/d4f6cb87f8a9cbe7a857eace734c37 Nov-08 18:26:46.966 [Task submitter] INFO nextflow.Session - [cb/d4f6cb] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993911) Nov-08 18:26:47.984 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993912) > jobId: 21958851; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/27/a7e155524abdba12d94701e2f41388 Nov-08 18:26:47.984 [Task submitter] INFO nextflow.Session - [27/a7e155] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993912) Nov-08 18:26:50.382 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958752; id: 514; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995876); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/5e/27b9840549542c52d19696b2a9e696 started: 1731119135421; exited: 2024-11-09T02:26:49.722011378Z; ] Nov-08 18:26:50.405 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958753; id: 515; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995905); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/46/d55bdf22436295a63b77037d265567 started: 1731119135434; exited: 2024-11-09T02:26:49.603856544Z; ] Nov-08 18:26:50.416 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958764; id: 522; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993898); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/00/19fcac664ee7766e82aa22d6b8544d started: 1731119135485; exited: 2024-11-09T02:26:46.184875822Z; ] Nov-08 18:26:50.477 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993919) > jobId: 21958852; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/1c/897f363388c415b41264563ba6bd15 Nov-08 18:26:50.477 [Task submitter] INFO nextflow.Session - [1c/897f36] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993919) Nov-08 18:26:50.678 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993920) > jobId: 21958853; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/c1/2a74513e131aa878d339da421abc69 Nov-08 18:26:50.678 [Task submitter] INFO nextflow.Session - [c1/2a7451] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993920) Nov-08 18:26:53.187 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993929) > jobId: 21958854; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/cc/a39227b132169c9876e1c11b80519e Nov-08 18:26:53.187 [Task submitter] INFO nextflow.Session - [cc/a39227] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993929) Nov-08 18:26:53.392 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993922) > jobId: 21958855; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ce/3b98bdf11ed2185266bfe2faceb24a Nov-08 18:26:53.393 [Task submitter] INFO nextflow.Session - [ce/3b98bd] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993922) Nov-08 18:26:53.590 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993926) > jobId: 21958856; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/41/8e102e52c312c2f834158173728273 Nov-08 18:26:53.590 [Task submitter] INFO nextflow.Session - [41/8e102e] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993926) Nov-08 18:26:55.826 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958699; id: 482; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995901); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d2/dda0950f4b6761fcd81734613152e8 started: 1731119090734; exited: 2024-11-09T02:26:55.197049679Z; ] Nov-08 18:26:58.513 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993928) > jobId: 21958857; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ce/dc3a4e49bbf1d4308b1d283fb2a232 Nov-08 18:26:58.513 [Task submitter] INFO nextflow.Session - [ce/dc3a4e] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993928) Nov-08 18:27:00.401 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958758; id: 517; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995877); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/6b/595e1c0ff07def5d02633e48ef5694 started: 1731119135449; exited: 2024-11-09T02:26:56.612713574Z; ] Nov-08 18:27:00.418 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958760; id: 519; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995879); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/f9/dca64391b4e273a366634e5a29d458 started: 1731119135454; exited: 2024-11-09T02:26:56.950085672Z; ] Nov-08 18:27:01.395 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856651) > jobId: 21958858; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ed/957acc563da1ee11620a0990a6a8ec Nov-08 18:27:01.395 [Task submitter] INFO nextflow.Session - [ed/957acc] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856651) Nov-08 18:27:03.931 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993917) > jobId: 21958859; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/5d/fbc01b66cc4fccd68618753ccf3aab Nov-08 18:27:03.931 [Task submitter] INFO nextflow.Session - [5d/fbc01b] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993917) Nov-08 18:27:10.398 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958765; id: 523; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995885); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/b8/d5e2549f8dc3c732c97ecd4bfc8e9c started: 1731119135499; exited: 2024-11-09T02:27:06.558988413Z; ] Nov-08 18:27:11.086 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656985_SRR10995884) > jobId: 21958860; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/19/dd9d266c390147392f31390c441969 Nov-08 18:27:11.086 [Task submitter] INFO nextflow.Session - [19/dd9d26] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656985_SRR10995884) Nov-08 18:27:15.591 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958704; id: 486; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995911); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/56/a9d1432914588a9eb1940d631382d6 started: 1731119095649; exited: 2024-11-09T02:27:10.992676702Z; ] Nov-08 18:27:16.100 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656973_SRR10995896) > jobId: 21958862; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ea/ba014885ea86a24346b6ef66c41042 Nov-08 18:27:16.100 [Task submitter] INFO nextflow.Session - [ea/ba0148] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656973_SRR10995896) Nov-08 18:27:25.382 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958701; id: 484; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995907); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/7b/cd852ef5797784cb7833fc9ada0df5 started: 1731119095629; exited: 2024-11-09T02:27:21.925856077Z; ] Nov-08 18:27:25.421 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958750; id: 511; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993895); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ab/4a542426f60ec129d570a5d2ef1ec3 started: 1731119135408; exited: 2024-11-09T02:27:20.809559651Z; ] Nov-08 18:27:25.445 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958751; id: 513; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993899); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/41/f820eca9b40c7625d9feda54a20583 started: 1731119135418; exited: 2024-11-09T02:27:20.493597249Z; ] Nov-08 18:27:25.465 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958772; id: 524; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993900); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/c6/03f6e39f345c3379632b8b1c1b7678 started: 1731119130527; exited: 2024-11-09T02:27:24.021765444Z; ] Nov-08 18:27:26.108 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656981_SRR10995888) > jobId: 21958864; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/de/1567c3d6a8c5f48d1ef2fe5fb09d3f Nov-08 18:27:26.108 [Task submitter] INFO nextflow.Session - [de/1567c3] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656981_SRR10995888) Nov-08 18:27:27.057 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656996_SRR10995873) > jobId: 21958865; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/a8/76942690ea063591be67e9573e327a Nov-08 18:27:27.058 [Task submitter] INFO nextflow.Session - [a8/769426] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656996_SRR10995873) Nov-08 18:27:28.071 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656961_SRR10995908) > jobId: 21958866; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/bc/ab75ef9f734a2875965cc8699dba35 Nov-08 18:27:28.071 [Task submitter] INFO nextflow.Session - [bc/ab75ef] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656961_SRR10995908) Nov-08 18:27:29.066 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656980_SRR10995889) > jobId: 21958867; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/6b/da97b29fcd94cdf295dbb6c22f5645 Nov-08 18:27:29.066 [Task submitter] INFO nextflow.Session - [6b/da97b2] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656980_SRR10995889) Nov-08 18:27:30.382 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958700; id: 483; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995903); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/c2/00806e531ec814c79c4eb6d18489c0 started: 1731119095620; exited: 2024-11-09T02:27:27.145702768Z; ] Nov-08 18:27:30.397 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958706; id: 488; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995910); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/9b/a797362760f0ec0fae2f1bea4508af started: 1731119095668; exited: 2024-11-09T02:27:28.893604781Z; ] Nov-08 18:27:30.419 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958745; id: 507; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993893); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/3a/ea368580529d936f02147888cea405 started: 1731119130451; exited: 2024-11-09T02:27:27.123249915Z; ] Nov-08 18:27:30.434 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958795; id: 539; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856675); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ed/307a144aaf5cff3ecad979025af03d started: 1731119130656; exited: 2024-11-09T02:27:26.740956423Z; ] Nov-08 18:27:31.066 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656965_SRR10995904) > jobId: 21958868; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/b0/2d847ab2e67295c675d5c60a9a9a68 Nov-08 18:27:31.066 [Task submitter] INFO nextflow.Session - [b0/2d847a] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656965_SRR10995904) Nov-08 18:27:32.083 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656978_SRR10995891) > jobId: 21958869; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/a3/eedef49c2d4e7bf45e873e2ff8ada6 Nov-08 18:27:32.083 [Task submitter] INFO nextflow.Session - [a3/eedef4] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656978_SRR10995891) Nov-08 18:27:33.097 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656991_SRR10995878) > jobId: 21958870; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/54/7f2a7d3cd72a744814243ada48e426 Nov-08 18:27:33.097 [Task submitter] INFO nextflow.Session - [54/7f2a7d] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656991_SRR10995878) Nov-08 18:27:34.073 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656993_SRR10995876) > jobId: 21958871; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/0c/e75c6d6ee1399efbd99988ec27e5e0 Nov-08 18:27:34.073 [Task submitter] INFO nextflow.Session - [0c/e75c6d] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656993_SRR10995876) Nov-08 18:27:35.381 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958702; id: 485; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995909); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/31/a3f0d8fe4a7848ec0840a557d943e4 started: 1731119095634; exited: 2024-11-09T02:27:32.34298746Z; ] Nov-08 18:27:35.386 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958714; id: 490; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993896); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/3e/21bd2d2826fd4ff7ed0d3738b20a9c started: 1731119095686; exited: 2024-11-09T02:27:34.094845847Z; ] Nov-08 18:27:36.120 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655182_SRR10993898) > jobId: 21958872; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/a6/4e705500b6878e0dcdfce2f3c22265 Nov-08 18:27:36.120 [Task submitter] INFO nextflow.Session - [a6/4e7055] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655182_SRR10993898) Nov-08 18:27:37.062 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656968_SRR10995901) > jobId: 21958873; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/1a/1ca8ac7b93108a12a4a4dd092408e5 Nov-08 18:27:37.062 [Task submitter] INFO nextflow.Session - [1a/1ca8ac] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656968_SRR10995901) Nov-08 18:27:40.390 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958748; id: 510; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993892); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/72/2a2f042f019c8961f9216a5e1a47dd started: 1731119135397; exited: 2024-11-09T02:27:37.188961257Z; ] Nov-08 18:27:42.383 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656958_SRR10995911) > jobId: 21958875; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/f8/5ff60fb2c84a48365618ee818f40fd Nov-08 18:27:42.383 [Task submitter] INFO nextflow.Session - [f8/5ff60f] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656958_SRR10995911) Nov-08 18:27:50.381 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958779; id: 527; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856661); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/15/80d0f0f3744fff47af762b6fa0c909 started: 1731119130573; exited: 2024-11-09T02:27:49.178667962Z; ] Nov-08 18:27:52.952 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655184_SRR10993896) > jobId: 21958876; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/b5/a382d2a00a8d1dd7580d52042ddaef Nov-08 18:27:52.952 [Task submitter] INFO nextflow.Session - [b5/a382d2] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655184_SRR10993896) Nov-08 18:27:55.605 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958787; id: 534; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856664); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/84/e97ebdb75b4f5fad831bc0a77a5aaf started: 1731119135518; exited: 2024-11-09T02:27:54.098993726Z; ] Nov-08 18:27:56.105 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059165) > jobId: 21958877; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/74/c040c403f1ab58da14eb9086646f2c Nov-08 18:27:56.105 [Task submitter] INFO nextflow.Session - [74/c040c4] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059165) Nov-08 18:28:00.384 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958749; id: 512; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995875); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/98/6cbac4d8260d8675d3c943743d6519 started: 1731119135402; exited: 2024-11-09T02:27:56.470322921Z; ] Nov-08 18:28:01.108 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059132) > jobId: 21958878; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/7a/b2471dc5838d37c8af328554365117 Nov-08 18:28:01.108 [Task submitter] INFO nextflow.Session - [7a/b2471d] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059132) Nov-08 18:28:10.384 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958660; id: 452; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059174); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/36/ed0272261feeec65e269c1c6d0a330 started: 1731119095591; exited: 2024-11-09T02:28:06.779883304Z; ] Nov-08 18:28:11.186 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059156) > jobId: 21958879; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/6e/c984d8c6c27cd6bd427b2b9bc8d845 Nov-08 18:28:11.186 [Task submitter] INFO nextflow.Session - [6e/c984d8] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059156) Nov-08 18:28:15.384 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958652; id: 449; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059150); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/52/6c610967aa6de518ed7c264b77601e started: 1731119090467; exited: 2024-11-09T02:28:12.770610804Z; ] Nov-08 18:28:15.398 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958794; id: 540; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856677); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/37/1999662da1e44a6fb72bcedd37aa9e started: 1731119130648; exited: 2024-11-09T02:28:10.653371848Z; ] Nov-08 18:28:15.408 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958865; id: 684; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656996_SRR10995873); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/a8/76942690ea063591be67e9573e327a started: 1731119275684; exited: 2024-11-09T02:28:13.038381035Z; ] Nov-08 18:28:15.524 [Task submitter] INFO nextflow.Session - [18/9a9ecd] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7656996_SRR10995873) Nov-08 18:28:15.578 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 716; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7656996_SRR10995873); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/18/9a9ecd1a0ac69b6148bf49a91baec9] Nov-08 18:28:16.098 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059159) > jobId: 21958880; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/57/319f8f11f43b1d3695443dae6f5cd2 Nov-08 18:28:16.098 [Task submitter] INFO nextflow.Session - [57/319f8f] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059159) Nov-08 18:28:17.095 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430567) > jobId: 21958881; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/2d/ec07dc2e05b35b467856f55460efa8 Nov-08 18:28:17.095 [Task submitter] INFO nextflow.Session - [2d/ec07dc] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430567) Nov-08 18:28:18.066 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059161) > jobId: 21958882; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/f8/ee099cacc10b44e6490403b1d9c856 Nov-08 18:28:18.067 [Task submitter] INFO nextflow.Session - [f8/ee099c] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059161) Nov-08 18:28:20.387 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958860; id: 668; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656985_SRR10995884); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/19/dd9d266c390147392f31390c441969 started: 1731119275664; exited: 2024-11-09T02:28:16.540711496Z; ] Nov-08 18:28:20.393 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958864; id: 683; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656981_SRR10995888); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/de/1567c3d6a8c5f48d1ef2fe5fb09d3f started: 1731119275675; exited: 2024-11-09T02:28:17.279757208Z; ] Nov-08 18:28:20.508 [Task submitter] INFO nextflow.Session - [3a/dd9034] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7656985_SRR10995884) Nov-08 18:28:20.541 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 718; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7656985_SRR10995884); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/3a/dd9034bcf4240e5abae0f1b0fb17ac] Nov-08 18:28:21.161 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > No more task to compute -- The following nodes are still active: [process] NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP status=ACTIVE port 0: (queue) OPEN ; channel: - port 1: (value) bound ; channel: ncbi_settings port 2: (value) bound ; channel: certificate port 3: (cntrl) - ; channel: $ [process] NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET status=ACTIVE port 0: (queue) OPEN ; channel: meta port 1: (value) bound ; channel: pipeline port 2: (value) bound ; channel: strandedness port 3: (value) bound ; channel: mapping_fields port 4: (cntrl) - ; channel: $ [process] NFCORE_FETCHNGS:SRA:MULTIQC_MAPPINGS_CONFIG status=ACTIVE port 0: (queue) OPEN ; channel: csv port 1: (cntrl) - ; channel: $ Nov-08 18:28:21.216 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430586) > jobId: 21958883; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/44/c74a065ecf0e69f08583f17245f140 Nov-08 18:28:21.216 [Task submitter] INFO nextflow.Session - [44/c74a06] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430586) Nov-08 18:28:21.447 [Task submitter] INFO nextflow.Session - [c6/5fd3e4] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7656981_SRR10995888) Nov-08 18:28:21.450 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 717; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7656981_SRR10995888); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/c6/5fd3e448f53ee3da984ffef31beecc] Nov-08 18:28:22.108 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430597) > jobId: 21958884; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/c3/0d0dbaf04e850106f493fc67c66ee9 Nov-08 18:28:22.108 [Task submitter] INFO nextflow.Session - [c3/0d0dba] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430597) Nov-08 18:28:25.375 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor slurm > tasks to be completed: 100 -- submitted tasks are shown below ~> TaskHandler[jobId: 21958643; id: 445; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059142); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/7f/293a6e1301f6afb8e6788a16dd507e started: 1731119090394; exited: -; ] ~> TaskHandler[jobId: 21958644; id: 446; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059144); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/38/5686050a902c123cef2f300483bf5c started: 1731119090427; exited: -; ] ~> TaskHandler[jobId: 21958646; id: 444; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059138); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/de/931b5d28714ae8d33284533bd38d17 started: 1731119090438; exited: -; ] ~> TaskHandler[jobId: 21958647; id: 447; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059139); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/c8/f34fe348d3215980dba9ecf74daf73 started: 1731119090447; exited: -; ] ~> TaskHandler[jobId: 21958648; id: 448; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059149); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/f6/6521e3f9cbd8d10fb1b65bbc1b3705 started: 1731119095563; exited: -; ] ~> TaskHandler[jobId: 21958658; id: 451; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059155); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/0d/abde0ac78431c93edc2cb34f0dcb13 started: 1731119095576; exited: -; ] ~> TaskHandler[jobId: 21958659; id: 450; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059151); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/6d/56df3ce0d00ede46603882f1c17b12 started: 1731119095585; exited: -; ] ~> TaskHandler[jobId: 21958661; id: 453; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059141); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/51/529cb18a028b631a4030cf1a5c264f started: 1731119090502; exited: -; ] ~> TaskHandler[jobId: 21958662; id: 454; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059173); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/15/1fc6278612451f054957b6b8f4b369 started: 1731119090514; exited: -; ] ~> TaskHandler[jobId: 21958663; id: 455; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059172); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/f9/a4880938c195ef418493105432f431 started: 1731119090530; exited: -; ] .. remaining tasks omitted. Nov-08 18:28:25.384 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958721; id: 494; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995902); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/2f/22c23a946fc43d954ac6b9b8043d63 started: 1731119135377; exited: 2024-11-09T02:28:22.9854895Z; ] Nov-08 18:28:25.392 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958785; id: 531; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856666); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/6c/536afdd7e8268f78daaef4ec5d9404 started: 1731119135504; exited: 2024-11-09T02:28:20.606778937Z; ] Nov-08 18:28:25.443 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958871; id: 691; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656993_SRR10995876); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/0c/e75c6d6ee1399efbd99988ec27e5e0 started: 1731119275714; exited: 2024-11-09T02:28:23.43098362Z; ] Nov-08 18:28:25.516 [Task submitter] INFO nextflow.Session - [88/32592f] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7656993_SRR10995876) Nov-08 18:28:25.553 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 721; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7656993_SRR10995876); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/88/32592fee394a3d5836427cf840ec82] Nov-08 18:28:26.298 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430598) > jobId: 21958885; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/52/25f5219a69b75073a0a1cde19edfde Nov-08 18:28:26.298 [Task submitter] INFO nextflow.Session - [52/25f521] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430598) Nov-08 18:28:28.876 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430601) > jobId: 21958886; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/b5/da0bc2bfd271af21ff7aead8baeff7 Nov-08 18:28:28.877 [Task submitter] INFO nextflow.Session - [b5/da0bc2] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430601) Nov-08 18:28:29.079 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430599) > jobId: 21958887; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/86/e6541b2fcf937935cd17f0d45add60 Nov-08 18:28:29.079 [Task submitter] INFO nextflow.Session - [86/e6541b] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430599) Nov-08 18:28:30.381 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958754; id: 516; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993897); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/8d/b9c61d68cfdc9e820e24b8ab910433 started: 1731119135439; exited: 2024-11-09T02:28:29.811856924Z; ] Nov-08 18:28:30.389 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958862; id: 673; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656973_SRR10995896); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ea/ba014885ea86a24346b6ef66c41042 started: 1731119275669; exited: 2024-11-09T02:28:29.094492316Z; ] Nov-08 18:28:30.409 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958866; id: 685; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656961_SRR10995908); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/bc/ab75ef9f734a2875965cc8699dba35 started: 1731119275692; exited: 2024-11-09T02:28:27.811273405Z; ] Nov-08 18:28:30.424 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958867; id: 686; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656980_SRR10995889); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/6b/da97b29fcd94cdf295dbb6c22f5645 started: 1731119275700; exited: 2024-11-09T02:28:26.081282896Z; ] Nov-08 18:28:30.429 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958869; id: 689; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656978_SRR10995891); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/a3/eedef49c2d4e7bf45e873e2ff8ada6 started: 1731119275707; exited: 2024-11-09T02:28:28.677372345Z; ] Nov-08 18:28:30.443 [Task submitter] INFO nextflow.Session - [3a/8f3fef] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7656973_SRR10995896) Nov-08 18:28:30.449 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 723; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7656973_SRR10995896); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/3a/8f3fef7e9e0a6a142fc73ac1cfdd2c] Nov-08 18:28:30.477 [Task submitter] INFO nextflow.Session - [0c/ea86d9] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7656980_SRR10995889) Nov-08 18:28:30.491 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 725; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7656980_SRR10995889); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/0c/ea86d93d48c47494ea20fbcb3ad080] Nov-08 18:28:31.444 [Task submitter] INFO nextflow.Session - [84/b4c3fc] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7656961_SRR10995908) Nov-08 18:28:31.462 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 724; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7656961_SRR10995908); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/84/b4c3fc2f3c05ca2b89224adc1e49df] Nov-08 18:28:31.478 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430607) > jobId: 21958888; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/f5/54952f1986c46a15b68944c961e5ca Nov-08 18:28:31.478 [Task submitter] INFO nextflow.Session - [f5/54952f] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430607) Nov-08 18:28:32.444 [Task submitter] INFO nextflow.Session - [df/1043de] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7656978_SRR10995891) Nov-08 18:28:32.450 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 726; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7656978_SRR10995891); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/df/1043de4418ce9c2a9a5acc50ab985f] Nov-08 18:28:34.481 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430604) > jobId: 21958889; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/6a/09d00433101b86973c79bf7c56fd37 Nov-08 18:28:34.481 [Task submitter] INFO nextflow.Session - [6a/09d004] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430604) Nov-08 18:28:34.682 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430605) > jobId: 21958890; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/05/d1177a4733df2dd3fa63ab4e6ca681 Nov-08 18:28:34.682 [Task submitter] INFO nextflow.Session - [05/d1177a] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430605) Nov-08 18:28:34.819 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430606) > jobId: 21958891; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/39/f24c53bdad4f6a3e7c29b18b9d0eef Nov-08 18:28:34.819 [Task submitter] INFO nextflow.Session - [39/f24c53] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430606) Nov-08 18:28:35.389 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958669; id: 460; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059176); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/60/2f2164e4176c59a9f7397eb1450ed5 started: 1731119090564; exited: 2024-11-09T02:28:33.902016608Z; ] Nov-08 18:28:35.399 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958773; id: 526; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856658); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/87/d270e827af7cb65e96021f345001a6 started: 1731119130536; exited: 2024-11-09T02:28:33.366635627Z; ] Nov-08 18:28:35.418 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958778; id: 528; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856653); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/0e/93f0cc53e88f531b36ceaad1e3f604 started: 1731119130561; exited: 2024-11-09T02:28:33.127811537Z; ] Nov-08 18:28:37.126 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856657) > jobId: 21958892; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/4e/da2acb1c43737504d597723198af54 Nov-08 18:28:37.126 [Task submitter] INFO nextflow.Session - [4e/da2acb] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856657) Nov-08 18:28:37.322 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856672) > jobId: 21958893; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/af/c0f3a658f65e668c797e1dbede54bd Nov-08 18:28:37.322 [Task submitter] INFO nextflow.Session - [af/c0f3a6] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856672) Nov-08 18:28:39.913 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856655) > jobId: 21958895; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/66/20c145f6fc2f3277f267aa3538068f Nov-08 18:28:39.913 [Task submitter] INFO nextflow.Session - [66/20c145] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856655) Nov-08 18:28:40.122 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856685) > jobId: 21958896; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/1c/c708870594768a35e4795b798fe36a Nov-08 18:28:40.123 [Task submitter] INFO nextflow.Session - [1c/c70887] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856685) Nov-08 18:28:40.386 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958793; id: 538; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856674); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/b9/02e888b4f29c8922c9b4d5a1f711a3 started: 1731119130639; exited: 2024-11-09T02:28:40.047555875Z; ] Nov-08 18:28:41.148 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856660) > jobId: 21958897; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/c5/6096f1135141723324ebd70d34a5e7 Nov-08 18:28:41.148 [Task submitter] INFO nextflow.Session - [c5/6096f1] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856660) Nov-08 18:28:45.385 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958666; id: 458; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059186); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/0c/115468909a9109b9a5c073f468a41e started: 1731119090553; exited: 2024-11-09T02:28:44.002615498Z; ] Nov-08 18:28:45.393 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958781; id: 530; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856662); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/7f/7e8c9d71e6f9dc95b6bd5c3085d238 started: 1731119130603; exited: 2024-11-09T02:28:44.964440107Z; ] Nov-08 18:28:45.415 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958786; id: 533; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856668); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/84/ff5aa71a737e4bd21453fad7f45590 started: 1731119135511; exited: 2024-11-09T02:28:41.444620078Z; ] Nov-08 18:28:45.455 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958870; id: 690; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656991_SRR10995878); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/54/7f2a7d3cd72a744814243ada48e426 started: 1731119275708; exited: 2024-11-09T02:28:42.904556993Z; ] Nov-08 18:28:45.465 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958872; id: 693; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655182_SRR10993898); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/a6/4e705500b6878e0dcdfce2f3c22265 started: 1731119275720; exited: 2024-11-09T02:28:43.062573737Z; ] Nov-08 18:28:45.502 [Task submitter] INFO nextflow.Session - [ae/3a9b1e] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7656991_SRR10995878) Nov-08 18:28:45.510 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 734; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7656991_SRR10995878); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ae/3a9b1e8dd1a3de22b5c6c469ce0ea2] Nov-08 18:28:45.544 [Task submitter] INFO nextflow.Session - [84/b3f8e5] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7655182_SRR10993898) Nov-08 18:28:45.569 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 735; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7655182_SRR10993898); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/84/b3f8e54b52f0a9d624ae8e7da911bb] Nov-08 18:28:46.181 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430588) > jobId: 21958898; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/49/ea1e2fa7824b36fd88e3b4e7e299c3 Nov-08 18:28:46.181 [Task submitter] INFO nextflow.Session - [49/ea1e2f] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430588) Nov-08 18:28:47.058 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430589) > jobId: 21958899; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d9/225d9114754d3163bc003a8abe3f76 Nov-08 18:28:47.058 [Task submitter] INFO nextflow.Session - [d9/225d91] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430589) Nov-08 18:28:48.107 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430595) > jobId: 21958900; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/26/7636037dfe1bab1f8aab401652520b Nov-08 18:28:48.108 [Task submitter] INFO nextflow.Session - [26/763603] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430595) Nov-08 18:28:49.050 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059164) > jobId: 21958901; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/0e/e58512468c2679d645662f5c982161 Nov-08 18:28:49.050 [Task submitter] INFO nextflow.Session - [0e/e58512] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059164) Nov-08 18:28:50.065 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059162) > jobId: 21958902; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/a5/65bed61587b92800e2ce42c1bdaea9 Nov-08 18:28:50.066 [Task submitter] INFO nextflow.Session - [a5/65bed6] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059162) Nov-08 18:28:50.388 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958868; id: 688; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656965_SRR10995904); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/b0/2d847ab2e67295c675d5c60a9a9a68 started: 1731119275704; exited: 2024-11-09T02:28:49.246933874Z; ] Nov-08 18:28:50.432 [Task submitter] INFO nextflow.Session - [f3/5e6113] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7656965_SRR10995904) Nov-08 18:28:50.435 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 736; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7656965_SRR10995904); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/f3/5e61131574aa02584f285e8844d006] Nov-08 18:28:51.030 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059166) > jobId: 21958903; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/02/af9df9b377c3f97fcb570cef40718a Nov-08 18:28:51.031 [Task submitter] INFO nextflow.Session - [02/af9df9] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059166) Nov-08 18:28:55.588 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958747; id: 509; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993894); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/4a/d1568bb3d448473d83dcf768569a30 started: 1731119130470; exited: 2024-11-09T02:28:54.395284408Z; ] Nov-08 18:28:55.604 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958792; id: 537; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856671); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ad/52beb1a5a4b91d61c533ea0677c922 started: 1731119130633; exited: 2024-11-09T02:28:51.369965571Z; ] Nov-08 18:28:56.063 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430590) > jobId: 21958904; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/53/2da7e18413986c72dffda29d1b13dc Nov-08 18:28:56.063 [Task submitter] INFO nextflow.Session - [53/2da7e1] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430590) Nov-08 18:28:57.040 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430593) > jobId: 21958905; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/eb/0a3326eba4242f2b951bbfc54509d6 Nov-08 18:28:57.040 [Task submitter] INFO nextflow.Session - [eb/0a3326] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430593) Nov-08 18:29:00.385 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958796; id: 542; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856667); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/3c/3480af999cf01dd2fd8291fb45e511 started: 1731119130664; exited: 2024-11-09T02:28:57.24055567Z; ] Nov-08 18:29:01.041 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430578) > jobId: 21958906; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/23/00bd626fb3b4a38adf5b63d7634293 Nov-08 18:29:01.041 [Task submitter] INFO nextflow.Session - [23/00bd62] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430578) Nov-08 18:29:05.391 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958873; id: 694; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656968_SRR10995901); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/1a/1ca8ac7b93108a12a4a4dd092408e5 started: 1731119275720; exited: 2024-11-09T02:29:00.938025467Z; ] Nov-08 18:29:05.432 [Task submitter] INFO nextflow.Session - [39/cae13f] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7656968_SRR10995901) Nov-08 18:29:05.440 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 740; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7656968_SRR10995901); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/39/cae13f5ca1c5ab19445d261ecfe9b9] Nov-08 18:29:06.046 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430583) > jobId: 21958907; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/db/a300d22e8e6263b683dfd90758b740 Nov-08 18:29:06.046 [Task submitter] INFO nextflow.Session - [db/a300d2] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430583) Nov-08 18:29:10.384 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958724; id: 497; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059171); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/28/5a07a8913e6511e3e75bc80cf9c935 started: 1731119135391; exited: 2024-11-09T02:29:07.323819099Z; ] Nov-08 18:29:12.560 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993901) > jobId: 21958908; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/8a/de1477c48d58ef1ae3b8d4543d1fd3 Nov-08 18:29:12.560 [Task submitter] INFO nextflow.Session - [8a/de1477] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993901) Nov-08 18:29:15.382 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958663; id: 455; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059172); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/f9/a4880938c195ef418493105432f431 started: 1731119090530; exited: 2024-11-09T02:29:13.248411327Z; ] Nov-08 18:29:15.388 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958780; id: 529; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856663); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/8a/59cf56c3ec222d0c8d5b3dc0298610 started: 1731119130586; exited: 2024-11-09T02:29:12.956727375Z; ] Nov-08 18:29:15.400 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958798; id: 544; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856670); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/cc/17aea6c53c99e6e7e1bcf06991b00b started: 1731119135534; exited: 2024-11-09T02:29:14.424312346Z; ] Nov-08 18:29:17.781 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993925) > jobId: 21958909; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/27/2fe3b4f812d25923867a253cb40421 Nov-08 18:29:17.781 [Task submitter] INFO nextflow.Session - [27/2fe3b4] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993925) Nov-08 18:29:17.974 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993930) > jobId: 21958910; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/76/bc710b25f4e5ddd5cf3e31b2dd91fd Nov-08 18:29:17.974 [Task submitter] INFO nextflow.Session - [76/bc710b] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993930) Nov-08 18:29:18.116 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993931) > jobId: 21958911; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/6c/b1ae20c682f7fb204415d823380877 Nov-08 18:29:18.116 [Task submitter] INFO nextflow.Session - [6c/b1ae20] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993931) Nov-08 18:29:25.385 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958788; id: 536; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856669); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/e0/88b81bc2bc7a22974378640cb43f43 started: 1731119135523; exited: 2024-11-09T02:29:21.69780961Z; ] Nov-08 18:29:27.130 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656989_SRR10995880) > jobId: 21958913; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/de/f5b394ba1a39edac71d4c03e80565a Nov-08 18:29:27.131 [Task submitter] INFO nextflow.Session - [de/f5b394] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656989_SRR10995880) Nov-08 18:29:35.382 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958782; id: 532; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856665); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/01/ef8db0358e55f3e5aa2b63821e873d started: 1731119130612; exited: 2024-11-09T02:29:34.75090105Z; ] Nov-08 18:29:35.398 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958831; id: 609; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430591); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/f2/068af87bf860d5e53b5db502a039de started: 1731119275631; exited: 2024-11-09T02:29:31.580384328Z; ] Nov-08 18:29:36.062 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656971_SRR10995898) > jobId: 21958914; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/b9/034b4b23d21ad8f68aaf65bb5037d5 Nov-08 18:29:36.062 [Task submitter] INFO nextflow.Session - [b9/034b4b] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656971_SRR10995898) Nov-08 18:29:37.102 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656969_SRR10995900) > jobId: 21958915; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/5b/1844b79ea2c44f6a089da23b50ed5d Nov-08 18:29:37.102 [Task submitter] INFO nextflow.Session - [5b/1844b7] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656969_SRR10995900) Nov-08 18:29:45.396 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958835; id: 615; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430596); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/17/e1e0edd92ead7d35b77b7bcfb9fa0d started: 1731119275657; exited: 2024-11-09T02:29:42.484877116Z; ] Nov-08 18:29:46.050 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655185_SRR10993895) > jobId: 21958916; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/fa/43aec0d08c9d213416c68904475e4e Nov-08 18:29:46.050 [Task submitter] INFO nextflow.Session - [fa/43aec0] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655185_SRR10993895) Nov-08 18:29:50.384 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958667; id: 459; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059187); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/10/bcd25d2f7a62fae396b70ebd9645fc started: 1731119090558; exited: 2024-11-09T02:29:46.967427277Z; ] Nov-08 18:29:50.398 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958789; id: 535; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856673); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/52/7298eacd59a66e61955ac88f3ab0b6 started: 1731119130629; exited: 2024-11-09T02:29:46.325892781Z; ] Nov-08 18:29:51.048 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655187_SRR10993893) > jobId: 21958917; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/78/7e387d2fcf0c9e27cac5fb237ac3e0 Nov-08 18:29:51.048 [Task submitter] INFO nextflow.Session - [78/7e387d] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655187_SRR10993893) Nov-08 18:29:52.068 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644314_SRR8856675) > jobId: 21958918; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/60/4e2d364f427bd61390c9c401ceb4dd Nov-08 18:29:52.068 [Task submitter] INFO nextflow.Session - [60/4e2d36] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644314_SRR8856675) Nov-08 18:29:55.576 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958833; id: 613; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430592); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/6f/c56ff4d797ca67cba3818c22c1a4bf started: 1731119275637; exited: 2024-11-09T02:29:52.5601835Z; ] Nov-08 18:29:56.056 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644325_SRR8856664) > jobId: 21958920; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/23/81bfb67a8fd48fb6c911758a40be30 Nov-08 18:29:56.056 [Task submitter] INFO nextflow.Session - [23/81bfb6] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644325_SRR8856664) Nov-08 18:30:00.405 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958647; id: 447; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059139); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/c8/f34fe348d3215980dba9ecf74daf73 started: 1731119090447; exited: 2024-11-09T02:29:59.458760075Z; ] Nov-08 18:30:00.415 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958728; id: 498; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059170); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/bd/cf6cc3d94b45db7391d423a295d2fb started: 1731119130395; exited: 2024-11-09T02:29:58.951309811Z; ] Nov-08 18:30:01.793 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656967_SRR10995902) > jobId: 21958922; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/26/195ba2bb8a35dcd640a12dc3354ebf Nov-08 18:30:01.793 [Task submitter] INFO nextflow.Session - [26/195ba2] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656967_SRR10995902) Nov-08 18:30:02.062 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644323_SRR8856666) > jobId: 21958923; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/f3/2190e9bdf849cd51ffadbf61360787 Nov-08 18:30:02.062 [Task submitter] INFO nextflow.Session - [f3/2190e9] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644323_SRR8856666) Nov-08 18:30:15.389 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958797; id: 541; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856676); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/27/5d4caf3584337b8128f8388cf8deb4 started: 1731119140379; exited: 2024-11-09T02:30:13.340861676Z; ] Nov-08 18:30:16.045 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644326_SRR8856663) > jobId: 21958924; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/bd/1ba389104fef69020ba2bb00ca99a0 Nov-08 18:30:16.045 [Task submitter] INFO nextflow.Session - [bd/1ba389] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644326_SRR8856663) Nov-08 18:30:35.393 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958875; id: 698; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656958_SRR10995911); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/f8/5ff60fb2c84a48365618ee818f40fd started: 1731119415395; exited: 2024-11-09T02:30:34.086258072Z; ] Nov-08 18:30:35.400 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958876; id: 708; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655184_SRR10993896); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/b5/a382d2a00a8d1dd7580d52042ddaef started: 1731119415420; exited: 2024-11-09T02:30:32.879262078Z; ] Nov-08 18:30:35.458 [Task submitter] INFO nextflow.Session - [be/d854d3] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7655184_SRR10993896) Nov-08 18:30:35.466 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 755; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7655184_SRR10993896); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/be/d854d388bbf3f4f7e5c23fb93ff371] Nov-08 18:30:36.111 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059135) > jobId: 21958926; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/c7/11f621d13bb582d14f7cd6ada4389b Nov-08 18:30:36.111 [Task submitter] INFO nextflow.Session - [c7/11f621] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059135) Nov-08 18:30:36.459 [Task submitter] INFO nextflow.Session - [97/e808cd] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7656958_SRR10995911) Nov-08 18:30:36.462 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 756; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7656958_SRR10995911); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/97/e808cd9e0ff7f9717956cd15245f54] Nov-08 18:30:37.051 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059146) > jobId: 21958927; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/a3/ce933a18730a1b66b1db9e9a93b39a Nov-08 18:30:37.051 [Task submitter] INFO nextflow.Session - [a3/ce933a] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059146) Nov-08 18:30:40.409 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958840; id: 630; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430584); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ae/ebe67f1107407c72c8a6ad0f63a7ec started: 1731119370410; exited: 2024-11-09T02:30:39.175073755Z; ] Nov-08 18:30:41.070 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059154) > jobId: 21958929; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ce/b38014d6383c16999463e5fff57e15 Nov-08 18:30:41.070 [Task submitter] INFO nextflow.Session - [ce/b38014] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059154) Nov-08 18:30:50.386 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958834; id: 616; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856654); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/31/40c009aac9401612af4094e0fa6e4b started: 1731119275651; exited: 2024-11-09T02:30:47.631438417Z; ] Nov-08 18:30:50.395 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958838; id: 624; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430580); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/8d/fedbde7dfcd93e5d3a6458244e5bab started: 1731119370388; exited: 2024-11-09T02:30:50.052334468Z; ] Nov-08 18:30:51.971 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430600) > jobId: 21958930; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/11/dff651305c234b2adb9fbb7b91aaaa Nov-08 18:30:51.971 [Task submitter] INFO nextflow.Session - [11/dff651] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430600) Nov-08 18:30:52.116 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430603) > jobId: 21958931; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/7d/ee4fb4c2591c2908a716552cd2d149 Nov-08 18:30:52.116 [Task submitter] INFO nextflow.Session - [7d/ee4fb4] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430603) Nov-08 18:30:55.609 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958720; id: 493; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059153); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/42/fc52459ab48a4c4239d4938fa2d64b started: 1731119095704; exited: 2024-11-09T02:30:50.855975768Z; ] Nov-08 18:30:55.622 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958836; id: 620; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430571); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/83/f36dbbe784c1900f829988bca257a2 started: 1731119370382; exited: 2024-11-09T02:30:54.117139964Z; ] Nov-08 18:30:56.069 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856682) > jobId: 21958932; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/bb/f6c2ad2ae4f5ebf34fd9b1d699273b Nov-08 18:30:56.070 [Task submitter] INFO nextflow.Session - [bb/f6c2ad] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856682) Nov-08 18:30:57.194 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430576) > jobId: 21958933; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/5e/a13ec52d4a15e5c96ad3bf5692d784 Nov-08 18:30:57.194 [Task submitter] INFO nextflow.Session - [5e/a13ec5] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430576) Nov-08 18:31:00.388 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958646; id: 444; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059138); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/de/931b5d28714ae8d33284533bd38d17 started: 1731119090438; exited: 2024-11-09T02:30:56.55969309Z; ] Nov-08 18:31:01.078 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856684) > jobId: 21958934; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/99/90c7f3ca70d1252fbd63d9c9176e74 Nov-08 18:31:01.078 [Task submitter] INFO nextflow.Session - [99/90c7f3] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856684) Nov-08 18:31:20.383 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958827; id: 600; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856652); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/31/e3173df19a2a9edffefc71c43ba569 started: 1731119275614; exited: 2024-11-09T02:31:19.44709499Z; ] Nov-08 18:31:21.085 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993924) > jobId: 21958936; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/b1/a6d27c73d248f34980ea95fa088760 Nov-08 18:31:21.085 [Task submitter] INFO nextflow.Session - [b1/a6d27c] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993924) Nov-08 18:31:30.386 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958662; id: 454; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059173); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/15/1fc6278612451f054957b6b8f4b369 started: 1731119090514; exited: 2024-11-09T02:31:30.085487675Z; ] Nov-08 18:31:32.834 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656957_SRR10995912) > jobId: 21958937; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/3f/6d7b24ddce8ed96ed454c2de194e6b Nov-08 18:31:32.834 [Task submitter] INFO nextflow.Session - [3f/6d7b24] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656957_SRR10995912) Nov-08 18:31:35.396 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958842; id: 635; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993905); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/fe/a0bea9aeeed0fe21923944f1a2e139 started: 1731119370424; exited: 2024-11-09T02:31:34.229627627Z; ] Nov-08 18:31:37.539 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656972_SRR10995897) > jobId: 21958938; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/14/81a445ec36cf1455ad284cd57061e5 Nov-08 18:31:37.539 [Task submitter] INFO nextflow.Session - [14/81a445] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656972_SRR10995897) Nov-08 18:31:40.382 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958727; id: 499; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059180); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/8e/80e6d78b3ae0e75c543dd685809a4d started: 1731119130387; exited: 2024-11-09T02:31:38.809880579Z; ] Nov-08 18:31:40.389 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958839; id: 625; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430577); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/0e/c90bc34c7c5dc7f7d37e771cd7c73d started: 1731119370396; exited: 2024-11-09T02:31:37.491403208Z; ] Nov-08 18:31:40.397 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958841; id: 634; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993903); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/66/e9fd46febc5918e2b6d048f47c0725 started: 1731119370417; exited: 2024-11-09T02:31:37.145774042Z; ] Nov-08 18:31:41.049 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656962_SRR10995907) > jobId: 21958939; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/bb/c7aa9ac94b16c6040a08ec8e2bb5b6 Nov-08 18:31:41.049 [Task submitter] INFO nextflow.Session - [bb/c7aa9a] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656962_SRR10995907) Nov-08 18:31:42.029 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655181_SRR10993899) > jobId: 21958940; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/fc/8c1253b3c34d8b59205c7b827022b8 Nov-08 18:31:42.029 [Task submitter] INFO nextflow.Session - [fc/8c1253] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655181_SRR10993899) Nov-08 18:31:43.056 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655180_SRR10993900) > jobId: 21958941; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/6d/642004a6be9de5a98c9f4c1b41cae4 Nov-08 18:31:43.056 [Task submitter] INFO nextflow.Session - [6d/642004] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655180_SRR10993900) Nov-08 18:31:45.387 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958658; id: 451; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059155); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/0d/abde0ac78431c93edc2cb34f0dcb13 started: 1731119095576; exited: 2024-11-09T02:31:41.732383225Z; ] Nov-08 18:31:46.050 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656960_SRR10995909) > jobId: 21958942; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/7a/10ab861e51415348b97dc3b5d2bef8 Nov-08 18:31:46.050 [Task submitter] INFO nextflow.Session - [7a/10ab86] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656960_SRR10995909) Nov-08 18:32:00.387 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958659; id: 450; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059151); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/6d/56df3ce0d00ede46603882f1c17b12 started: 1731119095585; exited: 2024-11-09T02:31:57.443673321Z; ] Nov-08 18:32:01.050 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655186_SRR10993894) > jobId: 21958945; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/4b/393bec3617e31a7a517c6c02bc7433 Nov-08 18:32:01.050 [Task submitter] INFO nextflow.Session - [4b/393bec] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655186_SRR10993894) Nov-08 18:32:05.387 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958829; id: 610; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856679); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/0a/5908d29e90d9332ed1f85f90764fdc started: 1731119275626; exited: 2024-11-09T02:32:01.304085895Z; ] Nov-08 18:32:06.051 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644319_SRR8856670) > jobId: 21958946; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/83/48156bca4e6ac4c66b8223863478bc Nov-08 18:32:06.051 [Task submitter] INFO nextflow.Session - [83/48156b] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644319_SRR8856670) Nov-08 18:32:15.401 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958741; id: 503; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059184); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d8/09c4fcacba5c2567f9207458d70fb2 started: 1731119130421; exited: 2024-11-09T02:32:14.729538445Z; ] Nov-08 18:32:17.163 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644313_SRR8856676) > jobId: 21958948; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ab/888e4b9e686d5f1b94937d21013520 Nov-08 18:32:17.163 [Task submitter] INFO nextflow.Session - [ab/888e4b] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644313_SRR8856676) Nov-08 18:32:20.396 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958643; id: 445; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059142); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/7f/293a6e1301f6afb8e6788a16dd507e started: 1731119090394; exited: 2024-11-09T02:32:16.826713295Z; ] Nov-08 18:32:20.408 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958825; id: 593; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856683); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/c9/b13a49f5ac145aebf2f563b19053cb started: 1731119275610; exited: 2024-11-09T02:32:15.703384511Z; ] Nov-08 18:32:21.091 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845538_SRR13430571) > jobId: 21958950; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/fb/0413174a3044ec5b98d778528a1f84 Nov-08 18:32:21.091 [Task submitter] INFO nextflow.Session - [fb/041317] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845538_SRR13430571) Nov-08 18:32:22.058 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040053_SRR22059138) > jobId: 21958951; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/aa/4b47e18d98621f49f69f38da5e9521 Nov-08 18:32:22.058 [Task submitter] INFO nextflow.Session - [aa/4b47e1] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040053_SRR22059138) Nov-08 18:32:25.384 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958670; id: 461; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059175); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/bf/f5ccffa6ddfb151c475f6b85161afa started: 1731119090569; exited: 2024-11-09T02:32:24.864172013Z; ] Nov-08 18:32:26.081 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040012_SRR22059180) > jobId: 21958952; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/99/ec002fe1de155c2b611b5da06ca459 Nov-08 18:32:26.081 [Task submitter] INFO nextflow.Session - [99/ec002f] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040012_SRR22059180) Nov-08 18:32:35.386 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958828; id: 604; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059167); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/c0/65ad7b06e9ced43175b3e3f6852027 started: 1731119275618; exited: 2024-11-09T02:32:31.700404444Z; ] Nov-08 18:32:36.046 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995874) > jobId: 21958953; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/a8/8e7164047a53683a6ecf8fe83e433d Nov-08 18:32:36.046 [Task submitter] INFO nextflow.Session - [a8/8e7164] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995874) Nov-08 18:32:56.780 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958744; id: 506; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059137); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/47/5c768ddd81b3bdec9e0b6c560e2ab4 started: 1731119130444; exited: 2024-11-09T02:32:54.769946427Z; ] Nov-08 18:32:57.044 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430568) > jobId: 21958957; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/76/4341ea5d4198ed5335b97cd463db45 Nov-08 18:32:57.044 [Task submitter] INFO nextflow.Session - [76/4341ea] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430568) Nov-08 18:33:00.389 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958824; id: 589; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856659); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/b1/3953087982aacc731805a55459faea started: 1731119275609; exited: 2024-11-09T02:32:58.560207496Z; ] Nov-08 18:33:01.049 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856680) > jobId: 21958958; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/89/0834866035a69a1a872b86471c78b3 Nov-08 18:33:01.050 [Task submitter] INFO nextflow.Session - [89/083486] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856680) Nov-08 18:33:10.388 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958665; id: 457; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059177); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/99/c4b3da562bf7bd4595bda13bd48749 started: 1731119090544; exited: 2024-11-09T02:33:06.379169138Z; ] Nov-08 18:33:10.392 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958679; id: 469; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059168); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/c3/57a29f3fdd7b7e8c30ff928d32c7a8 started: 1731119090631; exited: 2024-11-09T02:33:06.574326869Z; ] Nov-08 18:33:11.038 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430581) > jobId: 21958959; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/3b/de96bd0697a6e076e4718587aadbfb Nov-08 18:33:11.038 [Task submitter] INFO nextflow.Session - [3b/de96bd] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430581) Nov-08 18:33:12.052 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993902) > jobId: 21958960; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/cf/0e958a442f1e374615d9f21bbf0df2 Nov-08 18:33:12.052 [Task submitter] INFO nextflow.Session - [cf/0e958a] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993902) Nov-08 18:33:20.409 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958746; id: 508; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059179); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/9b/6d5ee7f1aa3fe485ab8c2fdcfa18bb started: 1731119130461; exited: 2024-11-09T02:33:17.722826012Z; ] Nov-08 18:33:20.435 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958851; id: 645; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993912); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/27/a7e155524abdba12d94701e2f41388 started: 1731119540500; exited: 2024-11-09T02:33:16.686664437Z; ] Nov-08 18:33:20.452 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958913; id: 667; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656989_SRR10995880); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/de/f5b394ba1a39edac71d4c03e80565a started: 1731119576785; exited: 2024-11-09T02:33:18.620034358Z; ] Nov-08 18:33:20.517 [Task submitter] INFO nextflow.Session - [7d/9f63af] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7656989_SRR10995880) Nov-08 18:33:20.522 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 783; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7656989_SRR10995880); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/7d/9f63afef675bb6e4918950e764b5bd] Nov-08 18:33:21.072 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993918) > jobId: 21958961; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/e8/f207222bc82415a3fc57ea5f57a30c Nov-08 18:33:21.072 [Task submitter] INFO nextflow.Session - [e8/f20722] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993918) Nov-08 18:33:21.230 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > No more task to compute -- The following nodes are still active: [process] NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP status=ACTIVE port 0: (queue) OPEN ; channel: - port 1: (value) bound ; channel: ncbi_settings port 2: (value) bound ; channel: certificate port 3: (cntrl) - ; channel: $ [process] NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET status=ACTIVE port 0: (queue) OPEN ; channel: meta port 1: (value) bound ; channel: pipeline port 2: (value) bound ; channel: strandedness port 3: (value) bound ; channel: mapping_fields port 4: (cntrl) - ; channel: $ [process] NFCORE_FETCHNGS:SRA:MULTIQC_MAPPINGS_CONFIG status=ACTIVE port 0: (queue) OPEN ; channel: csv port 1: (cntrl) - ; channel: $ Nov-08 18:33:22.167 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656983_SRR10995886) > jobId: 21958962; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/f7/2fb7d1726dbd8850ac81010b7f4ea7 Nov-08 18:33:22.167 [Task submitter] INFO nextflow.Session - [f7/2fb7d1] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656983_SRR10995886) Nov-08 18:33:23.050 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656977_SRR10995892) > jobId: 21958963; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/f7/d26a94f17b29b11b17b23bdb60a450 Nov-08 18:33:23.050 [Task submitter] INFO nextflow.Session - [f7/d26a94] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656977_SRR10995892) Nov-08 18:33:25.414 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor slurm > tasks to be completed: 100 -- submitted tasks are shown below ~> TaskHandler[jobId: 21958644; id: 446; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059144); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/38/5686050a902c123cef2f300483bf5c started: 1731119090427; exited: -; ] ~> TaskHandler[jobId: 21958648; id: 448; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059149); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/f6/6521e3f9cbd8d10fb1b65bbc1b3705 started: 1731119095563; exited: -; ] ~> TaskHandler[jobId: 21958661; id: 453; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059141); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/51/529cb18a028b631a4030cf1a5c264f started: 1731119090502; exited: -; ] ~> TaskHandler[jobId: 21958664; id: 456; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059140); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/e5/ae91b62f88400525f901047e4a4647 started: 1731119090539; exited: -; ] ~> TaskHandler[jobId: 21958713; id: 491; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059152); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/22/21b008f0d6e92f0ed1250891bdab56 started: 1731119095670; exited: -; ] ~> TaskHandler[jobId: 21958723; id: 495; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059143); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/95/bbb75b128477ad01f84a84eade976c started: 1731119135384; exited: -; ] ~> TaskHandler[jobId: 21958725; id: 496; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059169); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/23/a90ceae98a3f17d3cd5831359f57fb started: 1731119130382; exited: -; ] ~> TaskHandler[jobId: 21958733; id: 500; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059181); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/5b/8417683dd672d0c7e944397e58e62e started: 1731119130402; exited: -; ] ~> TaskHandler[jobId: 21958738; id: 501; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059182); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/54/9a21aa768bb7874343d14f7d6e266b started: 1731119130409; exited: -; ] ~> TaskHandler[jobId: 21958739; id: 502; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059183); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/85/4552705bccc553cbaddf4bf6b2d7c2 started: 1731119130416; exited: -; ] .. remaining tasks omitted. Nov-08 18:33:25.424 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958846; id: 639; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993913); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/9e/ba041b2adae0d521ab854640588fae started: 1731119540458; exited: 2024-11-09T02:33:22.787909857Z; ] Nov-08 18:33:26.061 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656988_SRR10995881) > jobId: 21958964; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/92/fb5a4d02ca56e94eb530289818f3ba Nov-08 18:33:26.061 [Task submitter] INFO nextflow.Session - [92/fb5a4d] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656988_SRR10995881) Nov-08 18:33:40.427 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958713; id: 491; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059152); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/22/21b008f0d6e92f0ed1250891bdab56 started: 1731119095670; exited: 2024-11-09T02:33:36.754066741Z; ] Nov-08 18:33:40.432 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958733; id: 500; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059181); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/5b/8417683dd672d0c7e944397e58e62e started: 1731119130402; exited: 2024-11-09T02:33:37.130771111Z; ] Nov-08 18:33:40.438 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958847; id: 640; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993906); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/7a/f5a7871de519cd7b6639f46350c696 started: 1731119540468; exited: 2024-11-09T02:33:38.91286351Z; ] Nov-08 18:33:40.471 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958850; id: 646; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993911); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/cb/d4f6cb87f8a9cbe7a857eace734c37 started: 1731119540491; exited: 2024-11-09T02:33:36.544583995Z; ] Nov-08 18:33:41.444 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644328_SRR8856661) > jobId: 21958966; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/43/a938573056349f24440732a22ef3e6 Nov-08 18:33:41.444 [Task submitter] INFO nextflow.Session - [43/a93857] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644328_SRR8856661) Nov-08 18:33:42.037 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656994_SRR10995875) > jobId: 21958967; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/08/e71160fd2bfe0ef59a5905da6c23d9 Nov-08 18:33:42.037 [Task submitter] INFO nextflow.Session - [08/e71160] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656994_SRR10995875) Nov-08 18:33:43.056 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040018_SRR22059174) > jobId: 21958968; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/58/a1375f8a18e33add02c93e9ff56e2b Nov-08 18:33:43.056 [Task submitter] INFO nextflow.Session - [58/a1375f] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040018_SRR22059174) Nov-08 18:33:44.033 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040040_SRR22059150) > jobId: 21958969; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ea/d4401b8f57fdba3bcd7736563a08ab Nov-08 18:33:44.033 [Task submitter] INFO nextflow.Session - [ea/d4401b] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040040_SRR22059150) Nov-08 18:34:05.424 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958648; id: 448; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059149); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/f6/6521e3f9cbd8d10fb1b65bbc1b3705 started: 1731119095563; exited: 2024-11-09T02:34:04.46837943Z; ] Nov-08 18:34:06.044 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040052_SRR22059139) > jobId: 21958971; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/2d/dd7a65358a09e83a7542f6406fbb3e Nov-08 18:34:06.044 [Task submitter] INFO nextflow.Session - [2d/dd7a65] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040052_SRR22059139) Nov-08 18:34:10.428 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958743; id: 505; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059185); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/79/f58038d7efb100e90162d1ecf0e2fc started: 1731119130437; exited: 2024-11-09T02:34:09.438803498Z; ] Nov-08 18:34:11.172 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644337_SRR8856652) > jobId: 21959003; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/a6/a1f83596209fd2880ccb15ad8f6769 Nov-08 18:34:11.172 [Task submitter] INFO nextflow.Session - [a6/a1f835] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644337_SRR8856652) Nov-08 18:34:15.421 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958644; id: 446; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059144); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/38/5686050a902c123cef2f300483bf5c started: 1731119090427; exited: 2024-11-09T02:34:12.447860057Z; ] Nov-08 18:34:15.427 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958661; id: 453; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059141); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/51/529cb18a028b631a4030cf1a5c264f started: 1731119090502; exited: 2024-11-09T02:34:12.390766129Z; ] Nov-08 18:34:15.439 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958723; id: 495; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059143); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/95/bbb75b128477ad01f84a84eade976c started: 1731119135384; exited: 2024-11-09T02:34:13.280725751Z; ] Nov-08 18:34:15.451 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958854; id: 650; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993929); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/cc/a39227b132169c9876e1c11b80519e started: 1731119576784; exited: 2024-11-09T02:34:12.722939821Z; ] Nov-08 18:34:16.161 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040035_SRR22059155) > jobId: 21959019; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/6f/8e32802bc0c69fb83334a4469581ba Nov-08 18:34:16.161 [Task submitter] INFO nextflow.Session - [6f/8e3280] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040035_SRR22059155) Nov-08 18:34:18.704 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040038_SRR22059151) > jobId: 21959020; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/dc/812cec86a255666eb8b84f44f7942c Nov-08 18:34:18.704 [Task submitter] INFO nextflow.Session - [dc/812cec] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040038_SRR22059151) Nov-08 18:34:18.873 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644310_SRR8856679) > jobId: 21959021; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/00/d74050530b43fd65f14bf9428319cc Nov-08 18:34:18.873 [Task submitter] INFO nextflow.Session - [00/d74050] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644310_SRR8856679) Nov-08 18:34:19.041 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040008_SRR22059184) > jobId: 21959022; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/77/654656d1c4388394a97cfc0dcdcff8 Nov-08 18:34:19.041 [Task submitter] INFO nextflow.Session - [77/654656] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040008_SRR22059184) Nov-08 18:34:25.425 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958664; id: 456; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059140); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/e5/ae91b62f88400525f901047e4a4647 started: 1731119090539; exited: 2024-11-09T02:34:22.800627303Z; ] Nov-08 18:34:25.432 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958742; id: 504; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059178); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/2f/6ee29e277db2bdce1b504bed5c813d started: 1731119130428; exited: 2024-11-09T02:34:24.860281942Z; ] Nov-08 18:34:26.044 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040024_SRR22059168) > jobId: 21959023; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/33/4091184d771a2485dc33c543914ec5 Nov-08 18:34:26.044 [Task submitter] INFO nextflow.Session - [33/409118] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040024_SRR22059168) Nov-08 18:34:27.065 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040015_SRR22059177) > jobId: 21959024; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/e2/40156bd8814afdf0d3606e7145203f Nov-08 18:34:27.065 [Task submitter] INFO nextflow.Session - [e2/40156b] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040015_SRR22059177) Nov-08 18:34:30.421 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958844; id: 637; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993907); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/53/8c0340615b1afb1300571116c3760e started: 1731119540434; exited: 2024-11-09T02:34:27.949842995Z; ] Nov-08 18:34:31.044 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040037_SRR22059152) > jobId: 21959025; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/02/f2890358631a48a0eb96dea5cbcfdb Nov-08 18:34:31.044 [Task submitter] INFO nextflow.Session - [02/f28903] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040037_SRR22059152) Nov-08 18:34:50.420 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958848; id: 641; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993923); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/47/b0cc0a9ce9222fec27dd867bac3a98 started: 1731119540475; exited: 2024-11-09T02:34:47.45065616Z; ] Nov-08 18:34:51.050 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059128) > jobId: 21959027; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/74/d250d6f384706d5234e972fb7b27f6 Nov-08 18:34:51.051 [Task submitter] INFO nextflow.Session - [74/d250d6] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059128) Nov-08 18:35:02.105 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958849; id: 644; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993909); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/2d/6310cb5e7263532239efaedf8d7d3e started: 1731119540481; exited: 2024-11-09T02:34:57.630986686Z; ] Nov-08 18:35:04.780 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430602) > jobId: 21959028; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/8b/2b4c9003900995581da9b30534b600 Nov-08 18:35:04.780 [Task submitter] INFO nextflow.Session - [8b/2b4c90] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430602) Nov-08 18:35:30.427 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958739; id: 502; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059183); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/85/4552705bccc553cbaddf4bf6b2d7c2 started: 1731119130416; exited: 2024-11-09T02:35:28.598174743Z; ] Nov-08 18:35:30.433 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958914; id: 679; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656971_SRR10995898); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/b9/034b4b23d21ad8f68aaf65bb5037d5 started: 1731119710422; exited: 2024-11-09T02:35:28.619634643Z; ] Nov-08 18:35:30.483 [Task submitter] INFO nextflow.Session - [6b/320870] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7656971_SRR10995898) Nov-08 18:35:30.488 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 801; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7656971_SRR10995898); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/6b/3208706b013d12d30b6785a79b7a27] Nov-08 18:35:31.065 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656970_SRR10995899) > jobId: 21959034; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/4e/31def6f8b42c7c55125068d793faf6 Nov-08 18:35:31.066 [Task submitter] INFO nextflow.Session - [4e/31def6] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656970_SRR10995899) Nov-08 18:35:32.067 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656963_SRR10995906) > jobId: 21959037; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d3/6b0f6b1260e6dc98f50b857c30d34f Nov-08 18:35:32.067 [Task submitter] INFO nextflow.Session - [d3/6b0f6b] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656963_SRR10995906) Nov-08 18:35:40.421 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958738; id: 501; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059182); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/54/9a21aa768bb7874343d14f7d6e266b started: 1731119130409; exited: 2024-11-09T02:35:38.304453111Z; ] Nov-08 18:35:40.429 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958856; id: 651; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993926); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/41/8e102e52c312c2f834158173728273 started: 1731119670442; exited: 2024-11-09T02:35:38.440280111Z; ] Nov-08 18:35:40.443 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958857; id: 654; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993928); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ce/dc3a4e49bbf1d4308b1d283fb2a232 started: 1731119670455; exited: 2024-11-09T02:35:38.577831289Z; ] Nov-08 18:35:41.052 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655183_SRR10993897) > jobId: 21959054; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/09/ae44b0e32e1fddb56ebda6e5945d02 Nov-08 18:35:41.052 [Task submitter] INFO nextflow.Session - [09/ae44b0] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655183_SRR10993897) Nov-08 18:35:43.280 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644331_SRR8856658) > jobId: 21959055; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/a4/23b5a624b3a889c12e2a0ffe1d250a Nov-08 18:35:43.280 [Task submitter] INFO nextflow.Session - [a4/23b5a6] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644331_SRR8856658) Nov-08 18:35:43.413 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040016_SRR22059176) > jobId: 21959056; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/3b/e2a79b78161c08ba51c77e01de93e6 Nov-08 18:35:43.413 [Task submitter] INFO nextflow.Session - [3b/e2a79b] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040016_SRR22059176) Nov-08 18:36:30.429 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958855; id: 649; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993922); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ce/3b98bdf11ed2185266bfe2faceb24a started: 1731119670429; exited: 2024-11-09T02:36:27.494999105Z; ] Nov-08 18:36:31.163 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655171_SRR10993909) > jobId: 21959099; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/9a/4754554305c524d43c79c3e40d752f Nov-08 18:36:31.163 [Task submitter] INFO nextflow.Session - [9a/475455] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655171_SRR10993909) Nov-08 18:37:01.631 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958843; id: 636; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993904); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/33/66b53750e5ded2a50631df55ac33fd started: 1731119540413; exited: 2024-11-09T02:36:59.14260497Z; ] Nov-08 18:37:02.097 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430573) > jobId: 21959146; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/be/62d0319c75412c341d64d77832017a Nov-08 18:37:02.097 [Task submitter] INFO nextflow.Session - [be/62d031] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430573) Nov-08 18:37:20.425 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958845; id: 638; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993915); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/fd/83cf411449253a84b75d0fd0853434 started: 1731119540447; exited: 2024-11-09T02:37:17.941793292Z; ] Nov-08 18:37:21.028 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656982_SRR10995887) > jobId: 21959179; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/1b/2bb545d879113c7660650397d1f9ac Nov-08 18:37:21.028 [Task submitter] INFO nextflow.Session - [1b/2bb545] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656982_SRR10995887) Nov-08 18:37:30.427 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958852; id: 647; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993919); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/1c/897f363388c415b41264563ba6bd15 started: 1731119576784; exited: 2024-11-09T02:37:29.292131758Z; ] Nov-08 18:37:30.432 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958887; id: 577; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430599); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/86/e6541b2fcf937935cd17f0d45add60 started: 1731119795421; exited: 2024-11-09T02:37:26.901789231Z; ] Nov-08 18:37:30.469 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958888; id: 582; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430607); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/f5/54952f1986c46a15b68944c961e5ca started: 1731119790501; exited: 2024-11-09T02:37:29.567111764Z; ] Nov-08 18:37:30.475 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958889; id: 581; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430604); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/6a/09d00433101b86973c79bf7c56fd37 started: 1731119795426; exited: 2024-11-09T02:37:28.862050786Z; ] Nov-08 18:37:30.495 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958915; id: 680; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656969_SRR10995900); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/5b/1844b79ea2c44f6a089da23b50ed5d started: 1731119830425; exited: 2024-11-09T02:37:25.675598378Z; ] Nov-08 18:37:30.549 [Task submitter] INFO nextflow.Session - [63/fa94c9] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7656969_SRR10995900) Nov-08 18:37:30.551 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 812; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7656969_SRR10995900); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/63/fa94c9c42711f3f5f9fe71cb79211d] Nov-08 18:37:31.065 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644315_SRR8856674) > jobId: 21959193; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/c7/8901d6c493c2fe6da4e725aaabc9be Nov-08 18:37:31.065 [Task submitter] INFO nextflow.Session - [c7/8901d6] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644315_SRR8856674) Nov-08 18:37:32.037 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644327_SRR8856662) > jobId: 21959198; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/08/89dc75b619f8122aa3e0b10578609c Nov-08 18:37:32.037 [Task submitter] INFO nextflow.Session - [08/89dc75] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644327_SRR8856662) Nov-08 18:37:33.055 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040005_SRR22059186) > jobId: 21959200; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/94/5aa60409cb43e6229557883d038c21 Nov-08 18:37:33.055 [Task submitter] INFO nextflow.Session - [94/5aa604] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040005_SRR22059186) Nov-08 18:37:34.055 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644321_SRR8856668) > jobId: 21959201; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/93/56933dad53c8d65a0eb74702e5fc98 Nov-08 18:37:34.055 [Task submitter] INFO nextflow.Session - [93/56933d] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644321_SRR8856668) Nov-08 18:37:35.062 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644318_SRR8856671) > jobId: 21959203; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/51/310134177d20d86080592beeb710fc Nov-08 18:37:35.063 [Task submitter] INFO nextflow.Session - [51/310134] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644318_SRR8856671) Nov-08 18:37:35.425 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958886; id: 578; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430601); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/b5/da0bc2bfd271af21ff7aead8baeff7 started: 1731119790490; exited: 2024-11-09T02:37:32.93096432Z; ] Nov-08 18:37:35.431 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958917; id: 705; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655187_SRR10993893); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/78/7e387d2fcf0c9e27cac5fb237ac3e0 started: 1731119830435; exited: 2024-11-09T02:37:30.520471423Z; ] Nov-08 18:37:35.466 [Task submitter] INFO nextflow.Session - [0b/7da479] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7655187_SRR10993893) Nov-08 18:37:35.468 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 814; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7655187_SRR10993893); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/0b/7da479e6a4c76b125eaff981d01b6c] Nov-08 18:37:36.046 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644322_SRR8856667) > jobId: 21959205; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/b4/a054f9d16e0d429f63fd3d78bebdf2 Nov-08 18:37:36.046 [Task submitter] INFO nextflow.Session - [b4/a054f9] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644322_SRR8856667) Nov-08 18:37:37.152 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040021_SRR22059171) > jobId: 21959209; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/34/1d5cabcafe31ad0c04e82f8426f0dc Nov-08 18:37:37.153 [Task submitter] INFO nextflow.Session - [34/1d5cab] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040021_SRR22059171) Nov-08 18:37:50.430 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958725; id: 496; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059169); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/23/a90ceae98a3f17d3cd5831359f57fb started: 1731119130382; exited: 2024-11-09T02:37:46.571003098Z; ] Nov-08 18:37:51.176 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040019_SRR22059173) > jobId: 21959221; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/0a/4342c5c67f896a04d41a306d9303b7 Nov-08 18:37:51.177 [Task submitter] INFO nextflow.Session - [0a/4342c5] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040019_SRR22059173) Nov-08 18:37:55.425 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958883; id: 572; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430586); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/44/c74a065ecf0e69f08583f17245f140 started: 1731119790474; exited: 2024-11-09T02:37:52.560088767Z; ] Nov-08 18:37:56.058 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644306_SRR8856683) > jobId: 21959253; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/1e/50ce0259c7c0b448d3e7f2a6f56355 Nov-08 18:37:56.058 [Task submitter] INFO nextflow.Session - [1e/50ce02] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644306_SRR8856683) Nov-08 18:38:05.432 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958916; id: 700; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655185_SRR10993895); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/fa/43aec0d08c9d213416c68904475e4e started: 1731119835425; exited: 2024-11-09T02:38:04.718344892Z; ] Nov-08 18:38:05.480 [Task submitter] INFO nextflow.Session - [5b/39a0bc] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7655185_SRR10993895) Nov-08 18:38:05.491 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 817; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7655185_SRR10993895); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/5b/39a0bc16593b2e6cbe2bc21ca79656] Nov-08 18:38:06.230 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655169_SRR10993911) > jobId: 21959261; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/13/aa9c4758ef1425afc171d841f887b2 Nov-08 18:38:06.231 [Task submitter] INFO nextflow.Session - [13/aa9c47] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655169_SRR10993911) Nov-08 18:38:10.446 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958885; id: 575; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430598); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/52/25f5219a69b75073a0a1cde19edfde started: 1731119790486; exited: 2024-11-09T02:38:09.781293943Z; ] Nov-08 18:38:11.152 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040046_SRR22059143) > jobId: 21959266; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/e9/4bf0ad646fac0d81f24c7e4d7897cd Nov-08 18:38:11.152 [Task submitter] INFO nextflow.Session - [e9/4bf0ad] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040046_SRR22059143) Nov-08 18:38:20.443 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958853; id: 648; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993920); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/c1/2a74513e131aa878d339da421abc69 started: 1731119576784; exited: 2024-11-09T02:38:16.287167101Z; ] Nov-08 18:38:21.247 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > No more task to compute -- The following nodes are still active: [process] NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP status=ACTIVE port 0: (queue) OPEN ; channel: - port 1: (value) bound ; channel: ncbi_settings port 2: (value) bound ; channel: certificate port 3: (cntrl) - ; channel: $ [process] NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET status=ACTIVE port 0: (queue) OPEN ; channel: meta port 1: (value) bound ; channel: pipeline port 2: (value) bound ; channel: strandedness port 3: (value) bound ; channel: mapping_fields port 4: (cntrl) - ; channel: $ [process] NFCORE_FETCHNGS:SRA:MULTIQC_MAPPINGS_CONFIG status=ACTIVE port 0: (queue) OPEN ; channel: csv port 1: (cntrl) - ; channel: $ Nov-08 18:38:23.012 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655158_SRR10993922) > jobId: 21959298; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/a7/9e3c9e63910eb51ca4434d8b1142e5 Nov-08 18:38:23.012 [Task submitter] INFO nextflow.Session - [a7/9e3c9e] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655158_SRR10993922) Nov-08 18:38:25.437 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor slurm > tasks to be completed: 100 -- submitted tasks are shown below ~> TaskHandler[jobId: 21958858; id: 658; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856651); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ed/957acc563da1ee11620a0990a6a8ec started: 1731119755438; exited: 2024-11-09T02:38:23.168544908Z; ] ~> TaskHandler[jobId: 21958859; id: 659; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993917); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/5d/fbc01b66cc4fccd68618753ccf3aab started: 1731119755453; exited: -; ] ~> TaskHandler[jobId: 21958877; id: 545; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059165); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/74/c040c403f1ab58da14eb9086646f2c started: 1731119790433; exited: -; ] ~> TaskHandler[jobId: 21958878; id: 552; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059132); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/7a/b2471dc5838d37c8af328554365117 started: 1731119790439; exited: -; ] ~> TaskHandler[jobId: 21958879; id: 561; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059156); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/6e/c984d8c6c27cd6bd427b2b9bc8d845 started: 1731119790444; exited: -; ] ~> TaskHandler[jobId: 21958880; id: 565; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059159); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/57/319f8f11f43b1d3695443dae6f5cd2 started: 1731119790453; exited: -; ] ~> TaskHandler[jobId: 21958881; id: 568; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430567); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/2d/ec07dc2e05b35b467856f55460efa8 started: 1731119790462; exited: 2024-11-09T02:38:24.022913601Z; ] ~> TaskHandler[jobId: 21958882; id: 567; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059161); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/f8/ee099cacc10b44e6490403b1d9c856 started: 1731119790469; exited: -; ] ~> TaskHandler[jobId: 21958884; id: 571; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430597); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/c3/0d0dbaf04e850106f493fc67c66ee9 started: 1731119790479; exited: 2024-11-09T02:38:23.381138498Z; ] ~> TaskHandler[jobId: 21958890; id: 583; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430605); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/05/d1177a4733df2dd3fa63ab4e6ca681 started: 1731119875440; exited: -; ] .. remaining tasks omitted. Nov-08 18:38:25.437 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958858; id: 658; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856651); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ed/957acc563da1ee11620a0990a6a8ec started: 1731119755438; exited: 2024-11-09T02:38:23.168544908Z; ] Nov-08 18:38:25.438 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958881; id: 568; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430567); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/2d/ec07dc2e05b35b467856f55460efa8 started: 1731119790462; exited: 2024-11-09T02:38:24.022913601Z; ] Nov-08 18:38:25.438 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958884; id: 571; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430597); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/c3/0d0dbaf04e850106f493fc67c66ee9 started: 1731119790479; exited: 2024-11-09T02:38:23.381138498Z; ] Nov-08 18:38:28.356 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845505_SRR13430604) > jobId: 21959310; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/52/a77a1644bcdddfade075777e7b2f43 Nov-08 18:38:28.356 [Task submitter] INFO nextflow.Session - [52/a77a16] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845505_SRR13430604) Nov-08 18:38:28.619 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845502_SRR13430607) > jobId: 21959311; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ed/a04e529f70293040d254fa62c06f0b Nov-08 18:38:28.619 [Task submitter] INFO nextflow.Session - [ed/a04e52] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845502_SRR13430607) Nov-08 18:38:30.971 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845508_SRR13430601) > jobId: 21959312; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/b4/1a0e456bd1112c5a648c9ca13145df Nov-08 18:38:30.971 [Task submitter] INFO nextflow.Session - [b4/1a0e45] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845508_SRR13430601) Nov-08 18:38:35.450 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958922; id: 719; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656967_SRR10995902); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/26/195ba2bb8a35dcd640a12dc3354ebf started: 1731119875465; exited: 2024-11-09T02:38:33.328502722Z; ] Nov-08 18:38:35.479 [Task submitter] INFO nextflow.Session - [c9/8b6f87] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7656967_SRR10995902) Nov-08 18:38:35.483 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 823; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7656967_SRR10995902); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/c9/8b6f87b554d24a258475ef69c614fd] Nov-08 18:38:36.106 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845542_SRR13430567) > jobId: 21959325; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/26/c1d6f55dd758151beaf8c5d40cc0c3 Nov-08 18:38:36.106 [Task submitter] INFO nextflow.Session - [26/c1d6f5] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845542_SRR13430567) Nov-08 18:39:35.456 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958918; id: 706; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644314_SRR8856675); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/60/4e2d364f427bd61390c9c401ceb4dd started: 1731119830443; exited: 2024-11-09T02:39:33.777369517Z; ] Nov-08 18:39:35.525 [Task submitter] INFO nextflow.Session - [a1/07109e] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX5644314_SRR8856675) Nov-08 18:39:35.531 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 824; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX5644314_SRR8856675); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/a1/07109ec731c2a03dda44273e055f6f] Nov-08 18:39:36.332 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845517_SRR13430592) > jobId: 21959433; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/df/011a4ffa2a67e167287e83c92bd804 Nov-08 18:39:36.332 [Task submitter] INFO nextflow.Session - [df/011a4f] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845517_SRR13430592) Nov-08 18:39:40.444 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958859; id: 659; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993917); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/5d/fbc01b66cc4fccd68618753ccf3aab started: 1731119755453; exited: 2024-11-09T02:39:40.236481482Z; ] Nov-08 18:39:41.094 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040036_SRR22059153) > jobId: 21959441; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/24/5bc444c3d8cdf01bd00d5e01559fcd Nov-08 18:39:41.094 [Task submitter] INFO nextflow.Session - [24/5bc444] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040036_SRR22059153) Nov-08 18:39:50.476 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958890; id: 583; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430605); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/05/d1177a4733df2dd3fa63ab4e6ca681 started: 1731119875440; exited: 2024-11-09T02:39:47.33067686Z; ] Nov-08 18:39:52.672 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655168_SRR10993912) > jobId: 21959454; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/a7/5c6be89b6e4ef6753582438830947b Nov-08 18:39:52.672 [Task submitter] INFO nextflow.Session - [a7/5c6be8] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655168_SRR10993912) Nov-08 18:39:55.456 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958920; id: 711; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644325_SRR8856664); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/23/81bfb67a8fd48fb6c911758a40be30 started: 1731119830451; exited: 2024-11-09T02:39:54.160656429Z; ] Nov-08 18:39:55.539 [Task submitter] INFO nextflow.Session - [3b/8f7a77] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX5644325_SRR8856664) Nov-08 18:39:55.541 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 827; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX5644325_SRR8856664); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/3b/8f7a777d1fd18d03b8cdb85937fa44] Nov-08 18:39:57.780 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040007_SRR22059185) > jobId: 21959456; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/fa/6c3f3bffdf1308570742dfe540f422 Nov-08 18:39:57.780 [Task submitter] INFO nextflow.Session - [fa/6c3f3b] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040007_SRR22059185) Nov-08 18:40:10.447 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958891; id: 584; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430606); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/39/f24c53bdad4f6a3e7c29b18b9d0eef started: 1731119915444; exited: 2024-11-09T02:40:06.94150245Z; ] Nov-08 18:40:11.097 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655161_SRR10993919) > jobId: 21959457; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/7b/b5a1d7cce4a5fa3048195736e1351e Nov-08 18:40:11.097 [Task submitter] INFO nextflow.Session - [7b/b5a1d7] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655161_SRR10993919) Nov-08 18:40:45.449 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958892; id: 585; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856657); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/4e/da2acb1c43737504d597723198af54 started: 1731119920441; exited: 2024-11-09T02:40:42.028631933Z; ] Nov-08 18:40:46.137 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430609) > jobId: 21959458; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/13/cc31337b0ec98b98083d67755eb910 Nov-08 18:40:46.138 [Task submitter] INFO nextflow.Session - [13/cc3133] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430609) Nov-08 18:41:00.654 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958895; id: 588; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856655); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/66/20c145f6fc2f3277f267aa3538068f started: 1731119965448; exited: 2024-11-09T02:40:55.694624218Z; ] Nov-08 18:41:01.123 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656974_SRR10995895) > jobId: 21959471; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/9b/df5f997d56b65d74a66f43e78a68a2 Nov-08 18:41:01.124 [Task submitter] INFO nextflow.Session - [9b/df5f99] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656974_SRR10995895) Nov-08 18:41:10.452 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958882; id: 567; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059161); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/f8/ee099cacc10b44e6490403b1d9c856 started: 1731119790469; exited: 2024-11-09T02:41:09.982988681Z; ] Nov-08 18:41:11.086 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644312_SRR8856677) > jobId: 21959502; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/00/98c836ad2952c5d3bb8560064b1304 Nov-08 18:41:11.086 [Task submitter] INFO nextflow.Session - [00/98c836] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644312_SRR8856677) Nov-08 18:42:30.457 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958937; id: 676; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656957_SRR10995912); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/3f/6d7b24ddce8ed96ed454c2de194e6b started: 1731120130464; exited: 2024-11-09T02:42:27.664064473Z; ] Nov-08 18:42:30.477 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958938; id: 687; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656972_SRR10995897); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/14/81a445ec36cf1455ad284cd57061e5 started: 1731120130474; exited: 2024-11-09T02:42:27.424835618Z; ] Nov-08 18:42:30.491 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958939; id: 699; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656962_SRR10995907); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/bb/c7aa9ac94b16c6040a08ec8e2bb5b6 started: 1731120130484; exited: 2024-11-09T02:42:26.526985775Z; ] Nov-08 18:42:30.560 [Task submitter] INFO nextflow.Session - [d0/25683b] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7656962_SRR10995907) Nov-08 18:42:30.563 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 832; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7656962_SRR10995907); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d0/25683bf37b298ff858d715f4e493e3] Nov-08 18:42:30.593 [Task submitter] INFO nextflow.Session - [a9/f4cc46] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7656957_SRR10995912) Nov-08 18:42:30.615 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 833; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7656957_SRR10995912); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/a9/f4cc463ca8f6c425d0a0d7d81d9b30] Nov-08 18:42:31.305 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430587) > jobId: 21959535; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/0a/604c65054abb238a93505a7ec3f25d Nov-08 18:42:31.305 [Task submitter] INFO nextflow.Session - [0a/604c65] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430587) Nov-08 18:42:31.561 [Task submitter] INFO nextflow.Session - [52/d760a2] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7656972_SRR10995897) Nov-08 18:42:31.565 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 834; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7656972_SRR10995897); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/52/d760a2fa6e590a13579444e4f56bae] Nov-08 18:42:32.104 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993910) > jobId: 21959536; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ff/fffe9c981a1ebd116a552b4439f570 Nov-08 18:42:32.104 [Task submitter] INFO nextflow.Session - [ff/fffe9c] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993910) Nov-08 18:42:33.175 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993908) > jobId: 21959546; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/e7/0f8035164d11de5e3931e875a390c7 Nov-08 18:42:33.175 [Task submitter] INFO nextflow.Session - [e7/0f8035] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993908) Nov-08 18:42:40.448 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958942; id: 707; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656960_SRR10995909); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/7a/10ab861e51415348b97dc3b5d2bef8 started: 1731120130503; exited: 2024-11-09T02:42:37.607252898Z; ] Nov-08 18:42:40.498 [Task submitter] INFO nextflow.Session - [6a/591cff] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7656960_SRR10995909) Nov-08 18:42:40.511 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 835; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7656960_SRR10995909); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/6a/591cff026079b56ae0e20139ba25aa] Nov-08 18:42:41.663 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656979_SRR10995890) > jobId: 21959547; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/15/78e2cb7d68deb1b44fe2f844d261e0 Nov-08 18:42:41.663 [Task submitter] INFO nextflow.Session - [15/78e2cb] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656979_SRR10995890) Nov-08 18:42:50.450 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958879; id: 561; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059156); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/6e/c984d8c6c27cd6bd427b2b9bc8d845 started: 1731119790444; exited: 2024-11-09T02:42:48.036970963Z; ] Nov-08 18:42:50.583 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958940; id: 701; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655181_SRR10993899); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/fc/8c1253b3c34d8b59205c7b827022b8 started: 1731120130497; exited: 2024-11-09T02:42:46.919612872Z; ] Nov-08 18:42:50.645 [Task submitter] INFO nextflow.Session - [00/a0053a] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7655181_SRR10993899) Nov-08 18:42:50.647 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 837; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7655181_SRR10993899); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/00/a0053a017f75b67dc17701d81454d2] Nov-08 18:42:51.341 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644336_SRR8856653) > jobId: 21959548; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/0d/33d3d0d4d13ad1830b1af26286ed29 Nov-08 18:42:51.341 [Task submitter] INFO nextflow.Session - [0d/33d3d0] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644336_SRR8856653) Nov-08 18:42:52.125 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040020_SRR22059172) > jobId: 21959549; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/e5/ce4ed867aa9dee18b5c3fe8348f0b1 Nov-08 18:42:52.126 [Task submitter] INFO nextflow.Session - [e5/ce4ed8] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040020_SRR22059172) Nov-08 18:42:55.453 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958924; id: 743; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644326_SRR8856663); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/bd/1ba389104fef69020ba2bb00ca99a0 started: 1731120005453; exited: 2024-11-09T02:42:53.721873433Z; ] Nov-08 18:42:55.510 [Task submitter] INFO nextflow.Session - [39/b61fac] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX5644326_SRR8856663) Nov-08 18:42:55.514 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 838; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX5644326_SRR8856663); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/39/b61facf259d8ea97cc859ded1855a5] Nov-08 18:42:56.325 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845513_SRR13430596) > jobId: 21959550; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/33/7753fb00dc12f0dd0137b29f1f9fcb Nov-08 18:42:56.325 [Task submitter] INFO nextflow.Session - [33/7753fb] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845513_SRR13430596) Nov-08 18:43:05.456 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958880; id: 565; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059159); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/57/319f8f11f43b1d3695443dae6f5cd2 started: 1731119790453; exited: 2024-11-09T02:43:03.276690078Z; ] Nov-08 18:43:06.124 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040048_SRR22059142) > jobId: 21959553; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/c6/3e6a63c88415865ca140e4ee706d50 Nov-08 18:43:06.124 [Task submitter] INFO nextflow.Session - [c6/3e6a63] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040048_SRR22059142) Nov-08 18:43:10.459 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958923; id: 720; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644323_SRR8856666); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/f3/2190e9bdf849cd51ffadbf61360787 started: 1731120005447; exited: 2024-11-09T02:43:10.442662412Z; ] Nov-08 18:43:10.532 [Task submitter] INFO nextflow.Session - [ac/eeff17] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX5644323_SRR8856666) Nov-08 18:43:10.536 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 840; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX5644323_SRR8856666); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ac/eeff175e779fb722fd01bfaa511484] Nov-08 18:43:11.297 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040013_SRR22059179) > jobId: 21959554; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/26/44802217ad688c60910351ddfc5c78 Nov-08 18:43:11.297 [Task submitter] INFO nextflow.Session - [26/448022] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040013_SRR22059179) Nov-08 18:43:21.285 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > No more task to compute -- The following nodes are still active: [process] NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP status=ACTIVE port 0: (queue) OPEN ; channel: - port 1: (value) bound ; channel: ncbi_settings port 2: (value) bound ; channel: certificate port 3: (cntrl) - ; channel: $ [process] NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET status=ACTIVE port 0: (queue) OPEN ; channel: meta port 1: (value) bound ; channel: pipeline port 2: (value) bound ; channel: strandedness port 3: (value) bound ; channel: mapping_fields port 4: (cntrl) - ; channel: $ [process] NFCORE_FETCHNGS:SRA:MULTIQC_MAPPINGS_CONFIG status=ACTIVE port 0: (queue) OPEN ; channel: csv port 1: (cntrl) - ; channel: $ Nov-08 18:43:25.445 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor slurm > tasks to be completed: 100 -- submitted tasks are shown below ~> TaskHandler[jobId: 21958877; id: 545; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059165); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/74/c040c403f1ab58da14eb9086646f2c started: 1731119790433; exited: -; ] ~> TaskHandler[jobId: 21958878; id: 552; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059132); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/7a/b2471dc5838d37c8af328554365117 started: 1731119790439; exited: -; ] ~> TaskHandler[jobId: 21958893; id: 586; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856672); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/af/c0f3a658f65e668c797e1dbede54bd started: 1731119965443; exited: -; ] ~> TaskHandler[jobId: 21958896; id: 587; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856685); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/1c/c708870594768a35e4795b798fe36a started: 1731120055451; exited: -; ] ~> TaskHandler[jobId: 21958897; id: 591; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856660); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/c5/6096f1135141723324ebd70d34a5e7 started: 1731120130449; exited: -; ] ~> TaskHandler[jobId: 21958898; id: 598; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430588); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/49/ea1e2fa7824b36fd88e3b4e7e299c3 started: 1731120125450; exited: -; ] ~> TaskHandler[jobId: 21958899; id: 597; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430589); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d9/225d9114754d3163bc003a8abe3f76 started: 1731120125458; exited: -; ] ~> TaskHandler[jobId: 21958900; id: 599; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430595); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/26/7636037dfe1bab1f8aab401652520b started: 1731120130455; exited: -; ] ~> TaskHandler[jobId: 21958901; id: 602; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059164); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/0e/e58512468c2679d645662f5c982161 started: 1731120125467; exited: -; ] ~> TaskHandler[jobId: 21958902; id: 601; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059162); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/a5/65bed61587b92800e2ce42c1bdaea9 started: 1731120125472; exited: -; ] .. remaining tasks omitted. Nov-08 18:43:30.463 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958953; id: 543; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10995874); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/a8/8e7164047a53683a6ecf8fe83e433d started: 1731120170612; exited: 2024-11-09T02:43:27.644774155Z; ] Nov-08 18:43:31.101 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845523_SRR13430586) > jobId: 21959556; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/9d/0ffacb458faa3146493871ac1cff15 Nov-08 18:43:31.101 [Task submitter] INFO nextflow.Session - [9d/0ffacb] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845523_SRR13430586) Nov-08 18:43:35.452 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958898; id: 598; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430588); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/49/ea1e2fa7824b36fd88e3b4e7e299c3 started: 1731120125450; exited: 2024-11-09T02:43:33.744380001Z; ] Nov-08 18:43:35.458 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958941; id: 702; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655180_SRR10993900); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/6d/642004a6be9de5a98c9f4c1b41cae4 started: 1731120125508; exited: 2024-11-09T02:43:30.911666267Z; ] Nov-08 18:43:35.516 [Task submitter] INFO nextflow.Session - [03/5e707f] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7655180_SRR10993900) Nov-08 18:43:35.518 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 843; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7655180_SRR10993900); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/03/5e707f370771441a5d20943c81056e] Nov-08 18:43:36.264 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655163_SRR10993917) > jobId: 21959558; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/1d/ea0b6a0b2b724abd01ccc52ec267c0 Nov-08 18:43:36.264 [Task submitter] INFO nextflow.Session - [1d/ea0b6a] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655163_SRR10993917) Nov-08 18:43:37.101 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845504_SRR13430605) > jobId: 21959559; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/db/10517c166519240facfcf67ddb6688 Nov-08 18:43:37.101 [Task submitter] INFO nextflow.Session - [db/10517c] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845504_SRR13430605) Nov-08 18:43:40.453 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959028; id: 579; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430602); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/8b/2b4c9003900995581da9b30534b600 started: 1731120170702; exited: 2024-11-09T02:43:40.306232594Z; ] Nov-08 18:43:41.090 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040028_SRR22059161) > jobId: 21959560; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/5b/350e20c22532dd748032a34a411d82 Nov-08 18:43:41.090 [Task submitter] INFO nextflow.Session - [5b/350e20] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040028_SRR22059161) Nov-08 18:43:45.451 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958878; id: 552; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059132); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/7a/b2471dc5838d37c8af328554365117 started: 1731119790439; exited: 2024-11-09T02:43:43.556662438Z; ] Nov-08 18:43:46.105 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845507_SRR13430602) > jobId: 21959561; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/51/ac57edb22be7d338dedb73fab9e6c6 Nov-08 18:43:46.105 [Task submitter] INFO nextflow.Session - [51/ac57ed] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845507_SRR13430602) Nov-08 18:43:55.452 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958959; id: 629; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430581); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/3b/de96bd0697a6e076e4718587aadbfb started: 1731120170630; exited: 2024-11-09T02:43:53.23044493Z; ] Nov-08 18:43:57.447 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059147) > jobId: 21959562; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/79/4140de14e167111d903b7d87924f34 Nov-08 18:43:57.448 [Task submitter] INFO nextflow.Session - [79/4140de] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059147) Nov-08 18:44:02.439 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958900; id: 599; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430595); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/26/7636037dfe1bab1f8aab401652520b started: 1731120130455; exited: 2024-11-09T02:44:01.504998383Z; ] Nov-08 18:44:02.453 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958945; id: 737; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655186_SRR10993894); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/4b/393bec3617e31a7a517c6c02bc7433 started: 1731120125519; exited: 2024-11-09T02:43:58.623127342Z; ] Nov-08 18:44:02.506 [Task submitter] INFO nextflow.Session - [8e/f0df13] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7655186_SRR10993894) Nov-08 18:44:02.510 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 848; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7655186_SRR10993894); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/8e/f0df13386d2daefd75a4431f2547b1] Nov-08 18:44:04.699 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430575) > jobId: 21959564; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/53/cd226b1772efd65cb3a285c1890a5f Nov-08 18:44:04.700 [Task submitter] INFO nextflow.Session - [53/cd226b] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430575) Nov-08 18:44:04.825 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430569) > jobId: 21959565; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/30/886f726bef8bc0b5db9b0964a887f8 Nov-08 18:44:04.825 [Task submitter] INFO nextflow.Session - [30/886f72] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430569) Nov-08 18:44:05.460 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958893; id: 586; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856672); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/af/c0f3a658f65e668c797e1dbede54bd started: 1731119965443; exited: 2024-11-09T02:44:04.537384526Z; ] Nov-08 18:44:05.471 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958896; id: 587; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856685); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/1c/c708870594768a35e4795b798fe36a started: 1731120055451; exited: 2024-11-09T02:44:04.537562086Z; ] Nov-08 18:44:05.476 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958905; id: 611; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430593); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/eb/0a3326eba4242f2b951bbfc54509d6 started: 1731120170470; exited: 2024-11-09T02:44:04.386526877Z; ] Nov-08 18:44:06.086 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430585) > jobId: 21959566; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/40/ac589f17da1a330474876c6aa8ce56 Nov-08 18:44:06.086 [Task submitter] INFO nextflow.Session - [40/ac589f] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430585) Nov-08 18:44:07.074 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856678) > jobId: 21959567; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/6c/f063a22a00da9a3c27cfaeb76d1877 Nov-08 18:44:07.074 [Task submitter] INFO nextflow.Session - [6c/f063a2] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856678) Nov-08 18:44:08.150 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856681) > jobId: 21959568; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/2d/fae0289bdbd62259fecc47f482a192 Nov-08 18:44:08.150 [Task submitter] INFO nextflow.Session - [2d/fae028] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856681) Nov-08 18:44:10.455 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958930; id: 576; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430600); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/11/dff651305c234b2adb9fbb7b91aaaa started: 1731120170544; exited: 2024-11-09T02:44:06.070900646Z; ] Nov-08 18:44:11.089 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430608) > jobId: 21959569; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/bb/ddf5a5b053a578b1d8b66d8cfb490c Nov-08 18:44:11.090 [Task submitter] INFO nextflow.Session - [bb/ddf5a5] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430608) Nov-08 18:44:15.454 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959458; id: 622; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430609); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/13/cc31337b0ec98b98083d67755eb910 started: 1731120205463; exited: 2024-11-09T02:44:14.565873644Z; ] Nov-08 18:44:16.062 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856650) > jobId: 21959570; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/c3/5cc3ac6261d53e298ecc317ff43b47 Nov-08 18:44:16.062 [Task submitter] INFO nextflow.Session - [c3/5cc3ac] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856650) Nov-08 18:44:20.454 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958899; id: 597; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430589); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d9/225d9114754d3163bc003a8abe3f76 started: 1731120125458; exited: 2024-11-09T02:44:18.298210061Z; ] Nov-08 18:44:21.063 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656986_SRR10995883) > jobId: 21959571; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/28/9843215be5912748f20c3e4bed2bf5 Nov-08 18:44:21.064 [Task submitter] INFO nextflow.Session - [28/984321] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656986_SRR10995883) Nov-08 18:44:35.459 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958957; id: 590; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430568); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/76/4341ea5d4198ed5335b97cd463db45 started: 1731120170616; exited: 2024-11-09T02:44:32.007814194Z; ] Nov-08 18:44:36.910 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040022_SRR22059170) > jobId: 21959572; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/71/30b90996ef756e1ddf80c7b3d2f697 Nov-08 18:44:36.910 [Task submitter] INFO nextflow.Session - [71/30b909] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040022_SRR22059170) Nov-08 18:44:40.451 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958907; id: 628; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430583); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/db/a300d22e8e6263b683dfd90758b740 started: 1731120170498; exited: 2024-11-09T02:44:40.331114511Z; ] Nov-08 18:44:40.456 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958932; id: 594; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856682); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/bb/f6c2ad2ae4f5ebf34fd9b1d699273b started: 1731120170554; exited: 2024-11-09T02:44:39.488333278Z; ] Nov-08 18:44:40.483 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958934; id: 608; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856684); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/99/90c7f3ca70d1252fbd63d9c9176e74 started: 1731120170566; exited: 2024-11-09T02:44:38.834442434Z; ] Nov-08 18:44:40.495 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958960; id: 632; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993902); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/cf/0e958a442f1e374615d9f21bbf0df2 started: 1731120170652; exited: 2024-11-09T02:44:38.838571181Z; ] Nov-08 18:44:41.861 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655177_SRR10993903) > jobId: 21959573; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/7f/f4758f657802dcabc692eaa9b7501e Nov-08 18:44:41.861 [Task submitter] INFO nextflow.Session - [7f/f4758f] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655177_SRR10993903) Nov-08 18:44:42.050 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845532_SRR13430577) > jobId: 21959574; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/c9/0bc3dd487d8ec8977b7fe23687e8b8 Nov-08 18:44:42.050 [Task submitter] INFO nextflow.Session - [c9/0bc3dd] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845532_SRR13430577) Nov-08 18:44:43.616 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040017_SRR22059175) > jobId: 21959576; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/0e/6f6faa28d53de7ed2349d8b06143b6 Nov-08 18:44:43.617 [Task submitter] INFO nextflow.Session - [0e/6f6faa] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040017_SRR22059175) Nov-08 18:44:44.071 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040006_SRR22059167) > jobId: 21959577; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/56/ae8410506fac778cc3466d4b025cff Nov-08 18:44:44.071 [Task submitter] INFO nextflow.Session - [56/ae8410] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040006_SRR22059167) Nov-08 18:44:50.452 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958877; id: 545; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059165); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/74/c040c403f1ab58da14eb9086646f2c started: 1731119790433; exited: 2024-11-09T02:44:48.837052682Z; ] Nov-08 18:44:50.467 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958961; id: 663; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993918); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/e8/f207222bc82415a3fc57ea5f57a30c started: 1731120175458; exited: 2024-11-09T02:44:47.970226784Z; ] Nov-08 18:44:51.062 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040045_SRR22059144) > jobId: 21959578; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/e4/00db418003ad195042d476f9abaf3c Nov-08 18:44:51.063 [Task submitter] INFO nextflow.Session - [e4/00db41] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040045_SRR22059144) Nov-08 18:44:52.090 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040049_SRR22059141) > jobId: 21959579; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/11/57e54342b1e6648a0dd1bbb4e1cf49 Nov-08 18:44:52.090 [Task submitter] INFO nextflow.Session - [11/57e543] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040049_SRR22059141) Nov-08 18:44:55.461 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959535; id: 631; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430587); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/0a/604c65054abb238a93505a7ec3f25d started: 1731120205471; exited: 2024-11-09T02:44:54.474978019Z; ] Nov-08 18:44:56.084 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655173_SRR10993907) > jobId: 21959580; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/c8/4fff44632c30c34633a7d142f6335e Nov-08 18:44:56.084 [Task submitter] INFO nextflow.Session - [c8/4fff44] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655173_SRR10993907) Nov-08 18:45:00.451 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958897; id: 591; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856660); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/c5/6096f1135141723324ebd70d34a5e7 started: 1731120130449; exited: 2024-11-09T02:44:58.110113505Z; ] Nov-08 18:45:00.566 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958931; id: 580; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430603); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/7d/ee4fb4c2591c2908a716552cd2d149 started: 1731120170548; exited: 2024-11-09T02:44:55.556086464Z; ] Nov-08 18:45:00.573 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959146; id: 621; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430573); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/be/62d0319c75412c341d64d77832017a started: 1731120205456; exited: 2024-11-09T02:44:59.135871662Z; ] Nov-08 18:45:01.064 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655152_SRR10993928) > jobId: 21959582; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/01/7f6c88a5095dedc7a7ec0d7e6feef8 Nov-08 18:45:01.065 [Task submitter] INFO nextflow.Session - [01/7f6c88] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655152_SRR10993928) Nov-08 18:45:02.051 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655176_SRR10993904) > jobId: 21959583; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/7e/3ec8e6a559357d2dc70932d7486b13 Nov-08 18:45:02.051 [Task submitter] INFO nextflow.Session - [7e/3ec8e6] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655176_SRR10993904) Nov-08 18:45:03.089 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655165_SRR10993915) > jobId: 21959584; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/8c/590d6a38623c4835bdb2be4f5aa0d0 Nov-08 18:45:03.089 [Task submitter] INFO nextflow.Session - [8c/590d6a] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655165_SRR10993915) Nov-08 18:45:05.456 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958904; id: 612; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430590); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/53/2da7e18413986c72dffda29d1b13dc started: 1731120170466; exited: 2024-11-09T02:45:02.226756429Z; ] Nov-08 18:45:05.461 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958906; id: 619; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430578); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/23/00bd626fb3b4a38adf5b63d7634293 started: 1731120170492; exited: 2024-11-09T02:45:01.477082991Z; ] Nov-08 18:45:06.078 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845511_SRR13430598) > jobId: 21959585; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/18/be7280955bb72363084842c4905dab Nov-08 18:45:06.078 [Task submitter] INFO nextflow.Session - [18/be7280] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845511_SRR13430598) Nov-08 18:45:07.049 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655160_SRR10993920) > jobId: 21959586; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/52/3557f4b61e494aa926e39d3152e1e6 Nov-08 18:45:07.049 [Task submitter] INFO nextflow.Session - [52/3557f4] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655160_SRR10993920) Nov-08 18:45:25.462 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958911; id: 657; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993931); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/6c/b1ae20c682f7fb204415d823380877 started: 1731120170523; exited: 2024-11-09T02:45:22.001321589Z; ] Nov-08 18:45:26.067 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845541_SRR13430568) > jobId: 21959587; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/7a/aad39aeabd9a3e0866f866c02f3694 Nov-08 18:45:26.067 [Task submitter] INFO nextflow.Session - [7a/aad39a] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845541_SRR13430568) Nov-08 18:45:30.457 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958933; id: 595; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430576); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/5e/a13ec52d4a15e5c96ad3bf5692d784 started: 1731120170559; exited: 2024-11-09T02:45:27.586188343Z; ] Nov-08 18:45:31.080 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040025_SRR22059165) > jobId: 21959588; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/89/2630063e52a0cfa31c8120a329013b Nov-08 18:45:31.080 [Task submitter] INFO nextflow.Session - [89/263006] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040025_SRR22059165) Nov-08 18:45:40.453 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958946; id: 744; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644319_SRR8856670); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/83/48156bca4e6ac4c66b8223863478bc started: 1731120170589; exited: 2024-11-09T02:45:35.719311815Z; ] Nov-08 18:45:40.497 [Task submitter] INFO nextflow.Session - [93/218d07] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX5644319_SRR8856670) Nov-08 18:45:40.500 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 870; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX5644319_SRR8856670); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/93/218d07367cf484e5e94752d55013f6] Nov-08 18:45:41.285 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059127) > jobId: 21959590; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ab/cd02ba3996468104fe079fe540aa12 Nov-08 18:45:41.285 [Task submitter] INFO nextflow.Session - [ab/cd02ba] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059127) Nov-08 18:46:15.452 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958950; id: 761; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845538_SRR13430571); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/fb/0413174a3044ec5b98d778528a1f84 started: 1731120170602; exited: 2024-11-09T02:46:10.780819455Z; ] Nov-08 18:46:15.497 [Task submitter] INFO nextflow.Session - [c3/16e47a] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845538_SRR13430571) Nov-08 18:46:15.501 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 871; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845538_SRR13430571); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/c3/16e47abc0b5d43ddf7a988e98a3c77] Nov-08 18:46:16.339 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644320_SRR8856669) > jobId: 21959594; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/dd/4f3aeda593890964b937813c95d87d Nov-08 18:46:16.339 [Task submitter] INFO nextflow.Session - [dd/4f3aed] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644320_SRR8856669) Nov-08 18:46:25.452 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958936; id: 664; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993924); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/b1/a6d27c73d248f34980ea95fa088760 started: 1731120170573; exited: 2024-11-09T02:46:25.097696736Z; ] Nov-08 18:46:26.072 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644330_SRR8856659) > jobId: 21959596; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/1f/e226499803de961d0f98fa50e48934 Nov-08 18:46:26.072 [Task submitter] INFO nextflow.Session - [1f/e22649] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644330_SRR8856659) Nov-08 18:46:35.455 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958926; id: 554; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059135); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/c7/11f621d13bb582d14f7cd6ada4389b started: 1731120170527; exited: 2024-11-09T02:46:34.925881546Z; ] Nov-08 18:46:37.033 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040010_SRR22059182) > jobId: 21959599; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/a4/12d4a94572d50b2458b1f36bfc2684 Nov-08 18:46:37.033 [Task submitter] INFO nextflow.Session - [a4/12d4a9] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040010_SRR22059182) Nov-08 18:46:40.456 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958909; id: 656; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993925); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/27/2fe3b4f812d25923867a253cb40421 started: 1731120170511; exited: 2024-11-09T02:46:37.252344814Z; ] Nov-08 18:46:41.067 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845512_SRR13430597) > jobId: 21959600; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/9b/d724c919a852dd66235771af21083d Nov-08 18:46:41.067 [Task submitter] INFO nextflow.Session - [9b/d724c9] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845512_SRR13430597) Nov-08 18:47:00.453 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958962; id: 665; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656983_SRR10995886); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/f7/2fb7d1726dbd8850ac81010b7f4ea7 started: 1731120400474; exited: 2024-11-09T02:46:56.117342438Z; ] Nov-08 18:47:00.463 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958963; id: 666; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656977_SRR10995892); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/f7/d26a94f17b29b11b17b23bdb60a450 started: 1731120400481; exited: 2024-11-09T02:46:58.012876623Z; ] Nov-08 18:47:00.485 [Task submitter] INFO nextflow.Session - [95/8db925] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7656983_SRR10995886) Nov-08 18:47:00.495 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 875; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7656983_SRR10995886); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/95/8db925cd3c1a04060173dd2be25117] Nov-08 18:47:00.511 [Task submitter] INFO nextflow.Session - [ff/930696] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7656977_SRR10995892) Nov-08 18:47:00.513 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 876; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7656977_SRR10995892); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ff/930696c53c572f0e5ad2d99d2fa94c] Nov-08 18:47:01.049 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655178_SRR10993902) > jobId: 21959601; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/92/4cbc2bca2b14c6e3d59704604fd885 Nov-08 18:47:01.049 [Task submitter] INFO nextflow.Session - [92/4cbc2b] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655178_SRR10993902) Nov-08 18:47:02.059 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655162_SRR10993918) > jobId: 21959602; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/0d/7d2b793896910c7d91e43ee1fc8aa0 Nov-08 18:47:02.059 [Task submitter] INFO nextflow.Session - [0d/7d2b79] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655162_SRR10993918) Nov-08 18:47:05.539 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958958; id: 606; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856680); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/89/0834866035a69a1a872b86471c78b3 started: 1731120170621; exited: 2024-11-09T02:47:03.456025996Z; ] Nov-08 18:47:06.036 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845536_SRR13430573) > jobId: 21959609; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/56/c815e88a337582b8fe49244a68b9b2 Nov-08 18:47:06.036 [Task submitter] INFO nextflow.Session - [56/c815e8] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845536_SRR13430573) Nov-08 18:47:10.450 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958902; id: 601; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059162); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/a5/65bed61587b92800e2ce42c1bdaea9 started: 1731120125472; exited: 2024-11-09T02:47:08.375832396Z; ] Nov-08 18:47:12.275 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655156_SRR10993924) > jobId: 21959610; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/be/9cc11b040f6715048739ee7b8fbc0b Nov-08 18:47:12.275 [Task submitter] INFO nextflow.Session - [be/9cc11b] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655156_SRR10993924) Nov-08 18:47:20.454 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958908; id: 633; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993901); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/8a/de1477c48d58ef1ae3b8d4543d1fd3 started: 1731120170507; exited: 2024-11-09T02:47:17.004277414Z; ] Nov-08 18:47:20.462 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958948; id: 754; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644313_SRR8856676); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ab/888e4b9e686d5f1b94937d21013520 started: 1731120170596; exited: 2024-11-09T02:47:17.084443529Z; ] Nov-08 18:47:20.510 [Task submitter] INFO nextflow.Session - [de/860f1f] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX5644313_SRR8856676) Nov-08 18:47:20.512 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 880; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX5644313_SRR8856676); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/de/860f1f8a81d2cdd6f3c942fb74d85a] Nov-08 18:47:21.294 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059136) > jobId: 21959611; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/00/97fcc94196cc77f1c2efb9fb1f03c6 Nov-08 18:47:21.294 [Task submitter] INFO nextflow.Session - [00/97fcc9] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059136) Nov-08 18:47:22.256 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059148) > jobId: 21959612; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/16/3da11b646fdfebb0fac666e9e66be6 Nov-08 18:47:22.256 [Task submitter] INFO nextflow.Session - [16/3da11b] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059148) Nov-08 18:47:25.460 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958964; id: 671; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656988_SRR10995881); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/92/fb5a4d02ca56e94eb530289818f3ba started: 1731120400486; exited: 2024-11-09T02:47:20.956592703Z; ] Nov-08 18:47:25.510 [Task submitter] INFO nextflow.Session - [19/fc1aec] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7656988_SRR10995881) Nov-08 18:47:25.533 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 881; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7656988_SRR10995881); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/19/fc1aec7d1800a666833d5d33253fa8] Nov-08 18:47:26.329 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059160) > jobId: 21959613; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ef/0f83c0debfca18ba4aa2b24b651b97 Nov-08 18:47:26.329 [Task submitter] INFO nextflow.Session - [ef/0f83c0] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059160) Nov-08 18:48:00.452 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958927; id: 556; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059146); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/a3/ce933a18730a1b66b1db9e9a93b39a started: 1731120170532; exited: 2024-11-09T02:47:55.670782006Z; ] Nov-08 18:48:00.458 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959536; id: 642; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993910); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ff/fffe9c981a1ebd116a552b4439f570 started: 1731120290497; exited: 2024-11-09T02:47:55.734243285Z; ] Nov-08 18:48:01.067 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655174_SRR10993906) > jobId: 21959663; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/46/04a5bd34685dcb554332a65290d360 Nov-08 18:48:01.067 [Task submitter] INFO nextflow.Session - [46/04a5bd] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655174_SRR10993906) Nov-08 18:48:02.048 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040041_SRR22059149) > jobId: 21959664; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d4/e586cfb3515aa28d1ac175c503aa19 Nov-08 18:48:02.048 [Task submitter] INFO nextflow.Session - [d4/e586cf] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040041_SRR22059149) Nov-08 18:48:21.362 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > No more task to compute -- The following nodes are still active: [process] NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP status=ACTIVE port 0: (queue) OPEN ; channel: - port 1: (value) bound ; channel: ncbi_settings port 2: (value) bound ; channel: certificate port 3: (cntrl) - ; channel: $ [process] NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET status=ACTIVE port 0: (queue) OPEN ; channel: meta port 1: (value) bound ; channel: pipeline port 2: (value) bound ; channel: strandedness port 3: (value) bound ; channel: mapping_fields port 4: (cntrl) - ; channel: $ [process] NFCORE_FETCHNGS:SRA:MULTIQC_MAPPINGS_CONFIG status=ACTIVE port 0: (queue) OPEN ; channel: csv port 1: (cntrl) - ; channel: $ Nov-08 18:48:25.447 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor slurm > tasks to be completed: 100 -- submitted tasks are shown below ~> TaskHandler[jobId: 21958901; id: 602; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059164); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/0e/e58512468c2679d645662f5c982161 started: 1731120125467; exited: -; ] ~> TaskHandler[jobId: 21958903; id: 603; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059166); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/02/af9df9b377c3f97fcb570cef40718a started: 1731120170455; exited: -; ] ~> TaskHandler[jobId: 21958910; id: 655; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993930); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/76/bc710b25f4e5ddd5cf3e31b2dd91fd started: 1731120170517; exited: -; ] ~> TaskHandler[jobId: 21958929; id: 560; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059154); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ce/b38014d6383c16999463e5fff57e15 started: 1731120170541; exited: -; ] ~> TaskHandler[jobId: 21958951; id: 762; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040053_SRR22059138); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/aa/4b47e18d98621f49f69f38da5e9521 started: 1731120170608; exited: -; ] ~> TaskHandler[jobId: 21958952; id: 766; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040012_SRR22059180); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/99/ec002fe1de155c2b611b5da06ca459 started: 1731120400464; exited: -; ] ~> TaskHandler[jobId: 21958966; id: 710; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644328_SRR8856661); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/43/a938573056349f24440732a22ef3e6 started: 1731120400491; exited: -; ] ~> TaskHandler[jobId: 21958967; id: 712; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656994_SRR10995875); status: SUBMITTED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/08/e71160fd2bfe0ef59a5905da6c23d9 started: -; exited: -; ] ~> TaskHandler[jobId: 21958968; id: 713; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040018_SRR22059174); status: SUBMITTED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/58/a1375f8a18e33add02c93e9ff56e2b started: -; exited: -; ] ~> TaskHandler[jobId: 21958969; id: 714; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040040_SRR22059150); status: SUBMITTED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ea/d4401b8f57fdba3bcd7736563a08ab started: -; exited: -; ] .. remaining tasks omitted. Nov-08 18:48:35.633 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959546; id: 643; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993908); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/e7/0f8035164d11de5e3931e875a390c7 started: 1731120405450; exited: 2024-11-09T02:48:33.684105205Z; ] Nov-08 18:48:36.065 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655149_SRR10993931) > jobId: 21959666; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/fc/e68a076132b5eb0320c6d73d320567 Nov-08 18:48:36.066 [Task submitter] INFO nextflow.Session - [fc/e68a07] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655149_SRR10993931) Nov-08 18:49:10.562 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959037; id: 682; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656963_SRR10995906); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d3/6b0f6b1260e6dc98f50b857c30d34f started: 1731120515513; exited: 2024-11-09T02:49:06.836573764Z; ] Nov-08 18:49:10.608 [Task submitter] INFO nextflow.Session - [f0/d86ce4] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7656963_SRR10995906) Nov-08 18:49:10.611 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 885; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7656963_SRR10995906); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/f0/d86ce4bdfb148e06ea82bd0018f85e] Nov-08 18:49:11.069 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656992_SRR10995877) > jobId: 21959669; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d2/f0da775a58647de8c61bbc446ee6c5 Nov-08 18:49:11.069 [Task submitter] INFO nextflow.Session - [d2/f0da77] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656992_SRR10995877) Nov-08 18:49:20.459 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959547; id: 672; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656979_SRR10995890); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/15/78e2cb7d68deb1b44fe2f844d261e0 started: 1731120515643; exited: 2024-11-09T02:49:17.100523549Z; ] Nov-08 18:49:20.540 [Task submitter] INFO nextflow.Session - [cb/2cdd07] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7656979_SRR10995890) Nov-08 18:49:20.548 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 886; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7656979_SRR10995890); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/cb/2cdd07b940059de845cb5ddae06310] Nov-08 18:49:21.099 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845525_SRR13430584) > jobId: 21959670; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/77/688edafc4ad20b7ac076b4ae59fb34 Nov-08 18:49:21.099 [Task submitter] INFO nextflow.Session - [77/688eda] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845525_SRR13430584) Nov-08 18:49:30.460 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959034; id: 681; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656970_SRR10995899); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/4e/31def6f8b42c7c55125068d793faf6 started: 1731120515501; exited: 2024-11-09T02:49:27.272470108Z; ] Nov-08 18:49:30.470 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959179; id: 678; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656982_SRR10995887); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/1b/2bb545d879113c7660650397d1f9ac started: 1731120515544; exited: 2024-11-09T02:49:27.722811217Z; ] Nov-08 18:49:30.497 [Task submitter] INFO nextflow.Session - [6e/b06a6d] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7656970_SRR10995899) Nov-08 18:49:30.499 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 887; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7656970_SRR10995899); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/6e/b06a6df4309d9e76d260eedee63914] Nov-08 18:49:30.567 [Task submitter] INFO nextflow.Session - [1e/791c7b] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7656982_SRR10995887) Nov-08 18:49:30.569 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 888; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7656982_SRR10995887); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/1e/791c7bea1047267e25851c3f52e52a] Nov-08 18:49:31.076 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655157_SRR10993923) > jobId: 21959671; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/21/4afe725a68a519100d251ea00080ff Nov-08 18:49:31.076 [Task submitter] INFO nextflow.Session - [21/4afe72] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655157_SRR10993923) Nov-08 18:49:32.115 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040009_SRR22059183) > jobId: 21959672; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/51/84a5aa9138e907667b47d9b51dde7c Nov-08 18:49:32.115 [Task submitter] INFO nextflow.Session - [51/84a5aa] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040009_SRR22059183) Nov-08 18:49:35.457 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959471; id: 674; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656974_SRR10995895); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/9b/df5f997d56b65d74a66f43e78a68a2 started: 1731120515622; exited: 2024-11-09T02:49:33.685938012Z; ] Nov-08 18:49:35.700 [Task submitter] INFO nextflow.Session - [4e/08f223] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7656974_SRR10995895) Nov-08 18:49:35.702 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 889; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7656974_SRR10995895); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/4e/08f223ba1fc2597b568c66b0a9c6f6] Nov-08 18:49:36.084 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644338_SRR8856651) > jobId: 21959673; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/51/bd4062ee8bc4a39f3290537b1a129b Nov-08 18:49:36.084 [Task submitter] INFO nextflow.Session - [51/bd4062] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644338_SRR8856651) Nov-08 18:49:45.468 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958901; id: 602; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059164); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/0e/e58512468c2679d645662f5c982161 started: 1731120125467; exited: 2024-11-09T02:49:41.801183923Z; ] Nov-08 18:49:46.058 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845514_SRR13430595) > jobId: 21959674; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d2/8898d72bcf94514b8e06e4456f1840 Nov-08 18:49:46.058 [Task submitter] INFO nextflow.Session - [d2/8898d7] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845514_SRR13430595) Nov-08 18:49:50.453 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958967; id: 712; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656994_SRR10995875); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/08/e71160fd2bfe0ef59a5905da6c23d9 started: 1731120510452; exited: 2024-11-09T02:49:47.812943863Z; ] Nov-08 18:49:51.055 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845500_SRR13430609) > jobId: 21959675; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/b2/eaecb936f1ccc6e5feaf15c9a2e49a Nov-08 18:49:51.055 [Task submitter] INFO nextflow.Session - [b2/eaecb9] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845500_SRR13430609) Nov-08 18:49:51.448 [Task submitter] INFO nextflow.Session - [d8/3f7f88] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7656994_SRR10995875) Nov-08 18:49:51.452 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 891; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7656994_SRR10995875); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d8/3f7f88921bc0108fd6bc203f821504] Nov-08 18:50:00.459 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958910; id: 655; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993930); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/76/bc710b25f4e5ddd5cf3e31b2dd91fd started: 1731120170517; exited: 2024-11-09T02:49:57.677472276Z; ] Nov-08 18:50:01.048 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845533_SRR13430576) > jobId: 21959676; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/56/1b32d4470da82ff3f62b0842b6a2ef Nov-08 18:50:01.048 [Task submitter] INFO nextflow.Session - [56/1b32d4] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845533_SRR13430576) Nov-08 18:50:10.453 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958966; id: 710; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644328_SRR8856661); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/43/a938573056349f24440732a22ef3e6 started: 1731120400491; exited: 2024-11-09T02:50:06.595069707Z; ] Nov-08 18:50:11.077 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655150_SRR10993930) > jobId: 21959677; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d1/13dd5dac70dc522a266dc422c4ad1a Nov-08 18:50:11.077 [Task submitter] INFO nextflow.Session - [d1/13dd5d] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655150_SRR10993930) Nov-08 18:50:11.327 [Task submitter] INFO nextflow.Session - [e9/4586d9] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX5644328_SRR8856661) Nov-08 18:50:11.347 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 893; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX5644328_SRR8856661); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/e9/4586d93d26edca7bdfe6b3123fcf02] Nov-08 18:50:15.501 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959261; id: 788; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655169_SRR10993911); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/13/aa9c4758ef1425afc171d841f887b2 started: 1731120515570; exited: 2024-11-09T02:50:14.920535968Z; ] Nov-08 18:50:15.659 [Task submitter] INFO nextflow.Session - [b1/0aa19e] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7655169_SRR10993911) Nov-08 18:50:15.661 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 894; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7655169_SRR10993911); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/b1/0aa19e18b08453639dd7c03fe68049] Nov-08 18:50:16.604 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059134) > jobId: 21959678; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/b0/58e18b1c6ff69880b7c887095a8769 Nov-08 18:50:16.604 [Task submitter] INFO nextflow.Session - [b0/58e18b] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059134) Nov-08 18:50:25.472 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959298; id: 805; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655158_SRR10993922); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/a7/9e3c9e63910eb51ca4434d8b1142e5 started: 1731120515574; exited: 2024-11-09T02:50:23.283266418Z; ] Nov-08 18:50:26.048 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430572) > jobId: 21959680; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/db/2fd548f39b652d7c1d98af9a5becb4 Nov-08 18:50:26.048 [Task submitter] INFO nextflow.Session - [db/2fd548] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430572) Nov-08 18:50:26.253 [Task submitter] INFO nextflow.Session - [1d/73a2bd] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7655158_SRR10993922) Nov-08 18:50:26.271 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 895; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7655158_SRR10993922); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/1d/73a2bdfd676486314ff77c0adc58da] Nov-08 18:50:35.474 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959454; id: 782; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655168_SRR10993912); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/a7/5c6be89b6e4ef6753582438830947b started: 1731120520463; exited: 2024-11-09T02:50:30.830835714Z; ] Nov-08 18:50:35.706 [Task submitter] INFO nextflow.Session - [40/db73e1] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7655168_SRR10993912) Nov-08 18:50:35.723 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 896; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7655168_SRR10993912); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/40/db73e10a0c3a484a50708ac44ae294] Nov-08 18:50:36.054 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656964_SRR10995905) > jobId: 21959683; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d8/7dc6b99c1a4e220112964a5bdffc5b Nov-08 18:50:36.054 [Task submitter] INFO nextflow.Session - [d8/7dc6b9] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656964_SRR10995905) Nov-08 18:50:55.480 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959564; id: 573; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430575); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/53/cd226b1772efd65cb3a285c1890a5f started: 1731120550583; exited: 2024-11-09T02:50:53.389212929Z; ] Nov-08 18:50:56.088 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845510_SRR13430599) > jobId: 21959686; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ca/41a0164382f341074fd3ec92c638de Nov-08 18:50:56.089 [Task submitter] INFO nextflow.Session - [ca/41a016] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845510_SRR13430599) Nov-08 18:51:05.479 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959311; id: 811; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845502_SRR13430607); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ed/a04e529f70293040d254fa62c06f0b started: 1731120515579; exited: 2024-11-09T02:51:04.920662907Z; ] Nov-08 18:51:06.066 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845528_SRR13430581) > jobId: 21959692; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/8d/e6dd8164a31cffbc83bd955e8b6f93 Nov-08 18:51:06.066 [Task submitter] INFO nextflow.Session - [8d/e6dd81] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845528_SRR13430581) Nov-08 18:51:06.087 [Task submitter] INFO nextflow.Session - [6c/63f8ce] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845502_SRR13430607) Nov-08 18:51:06.089 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 898; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845502_SRR13430607); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/6c/63f8ce0118cd02034a542bb0d9bd24] Nov-08 18:51:10.549 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958929; id: 560; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059154); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ce/b38014d6383c16999463e5fff57e15 started: 1731120170541; exited: 2024-11-09T02:51:07.61629964Z; ] Nov-08 18:51:11.179 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845520_SRR13430589) > jobId: 21959693; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/6b/4a285b5502f1fe71c0ab409975a5bc Nov-08 18:51:11.179 [Task submitter] INFO nextflow.Session - [6b/4a285b] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845520_SRR13430589) Nov-08 18:51:20.479 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959312; id: 813; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845508_SRR13430601); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/b4/1a0e456bd1112c5a648c9ca13145df started: 1731120515586; exited: 2024-11-09T02:51:16.309335371Z; ] Nov-08 18:51:20.650 [Task submitter] INFO nextflow.Session - [f8/d68f00] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845508_SRR13430601) Nov-08 18:51:20.653 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 900; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845508_SRR13430601); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/f8/d68f00fe7f81ae8d0b68ad2f59addf] Nov-08 18:51:21.048 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655155_SRR10993925) > jobId: 21959696; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/72/1fc1dfe9a17546252b6144a138a12d Nov-08 18:51:21.048 [Task submitter] INFO nextflow.Session - [72/1fc1df] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655155_SRR10993925) Nov-08 18:51:30.483 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959556; id: 816; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845523_SRR13430586); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/9d/0ffacb458faa3146493871ac1cff15 started: 1731120510576; exited: 2024-11-09T02:51:27.174961654Z; ] Nov-08 18:51:30.520 [Task submitter] INFO nextflow.Session - [49/93a7d9] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845523_SRR13430586) Nov-08 18:51:30.522 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 901; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845523_SRR13430586); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/49/93a7d998de0ae6bb2368e231677c92] Nov-08 18:51:32.576 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059131) > jobId: 21959697; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/6c/dcf0b209d67c784d9ceeb28c9326c0 Nov-08 18:51:32.576 [Task submitter] INFO nextflow.Session - [6c/dcf0b2] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059131) Nov-08 18:51:45.482 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959310; id: 810; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845505_SRR13430604); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/52/a77a1644bcdddfade075777e7b2f43 started: 1731120510551; exited: 2024-11-09T02:51:44.780377394Z; ] Nov-08 18:51:45.491 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959565; id: 574; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430569); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/30/886f726bef8bc0b5db9b0964a887f8 started: 1731120550593; exited: 2024-11-09T02:51:41.126231523Z; ] Nov-08 18:51:46.032 [Task submitter] INFO nextflow.Session - [50/0d21a4] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845505_SRR13430604) Nov-08 18:51:46.035 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 903; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845505_SRR13430604); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/50/0d21a46a720c0d69d17a1a68e933b9] Nov-08 18:51:46.068 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993927) > jobId: 21959698; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/b7/69739d7d4fe4a071555a98fb2e85db Nov-08 18:51:46.068 [Task submitter] INFO nextflow.Session - [b7/69739d] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993927) Nov-08 18:51:47.057 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993916) > jobId: 21959699; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/36/33bd072f9f3bc964cb909d787747f7 Nov-08 18:51:47.057 [Task submitter] INFO nextflow.Session - [36/33bd07] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993916) Nov-08 18:51:50.510 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959201; id: 733; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644321_SRR8856668); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/93/56933dad53c8d65a0eb74702e5fc98 started: 1731120510530; exited: 2024-11-09T02:51:49.760962413Z; ] Nov-08 18:51:50.863 [Task submitter] INFO nextflow.Session - [f7/a667b0] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX5644321_SRR8856668) Nov-08 18:51:50.892 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 904; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX5644321_SRR8856668); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/f7/a667b039403dafd08c8935b7b044b7] Nov-08 18:51:51.134 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656975_SRR10995894) > jobId: 21959701; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/59/75c89c67ee8ac02df8f584ee0b3a40 Nov-08 18:51:51.134 [Task submitter] INFO nextflow.Session - [59/75c89c] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656975_SRR10995894) Nov-08 18:51:55.533 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959325; id: 822; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845542_SRR13430567); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/26/c1d6f55dd758151beaf8c5d40cc0c3 started: 1731120520456; exited: 2024-11-09T02:51:55.448716949Z; ] Nov-08 18:51:55.549 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959433; id: 751; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845517_SRR13430592); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/df/011a4ffa2a67e167287e83c92bd804 started: 1731120515593; exited: 2024-11-09T02:51:53.589240129Z; ] Nov-08 18:51:55.620 [Task submitter] INFO nextflow.Session - [0b/1b0be5] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845517_SRR13430592) Nov-08 18:51:55.649 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 905; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845517_SRR13430592); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/0b/1b0be54ebb78732033727abea52b97] Nov-08 18:51:55.687 [Task submitter] INFO nextflow.Session - [c9/400e1c] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845542_SRR13430567) Nov-08 18:51:55.697 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 906; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845542_SRR13430567); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/c9/400e1cc497f6fe2a87b336b74649de] Nov-08 18:51:56.353 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656959_SRR10995910) > jobId: 21959702; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/12/7260c2843e2cd81d229a7184e93463 Nov-08 18:51:56.354 [Task submitter] INFO nextflow.Session - [12/7260c2] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656959_SRR10995910) Nov-08 18:51:57.300 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655188_SRR10993892) > jobId: 21959703; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/f7/d34e7360c3ad2651aa6c35e11b157e Nov-08 18:51:57.300 [Task submitter] INFO nextflow.Session - [f7/d34e73] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655188_SRR10993892) Nov-08 18:52:00.513 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959054; id: 722; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655183_SRR10993897); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/09/ae44b0e32e1fddb56ebda6e5945d02 started: 1731120510490; exited: 2024-11-09T02:52:00.101221005Z; ] Nov-08 18:52:00.587 [Task submitter] INFO nextflow.Session - [82/857d2c] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7655183_SRR10993897) Nov-08 18:52:00.590 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 907; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7655183_SRR10993897); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/82/857d2c30b13c2b45362d94741d9331] Nov-08 18:52:01.306 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644316_SRR8856673) > jobId: 21959709; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/cc/826fadd7daf4e009c5363dba328f8a Nov-08 18:52:01.306 [Task submitter] INFO nextflow.Session - [cc/826fad] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644316_SRR8856673) Nov-08 18:52:05.493 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959099; id: 799; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655171_SRR10993909); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/9a/4754554305c524d43c79c3e40d752f started: 1731120515536; exited: 2024-11-09T02:52:01.09392802Z; ] Nov-08 18:52:05.641 [Task submitter] INFO nextflow.Session - [40/ce0e26] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7655171_SRR10993909) Nov-08 18:52:05.644 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 908; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7655171_SRR10993909); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/40/ce0e26018afaaf158331b93a3a4e7f] Nov-08 18:52:06.826 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655167_SRR10993913) > jobId: 21959712; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/16/e0abf95671e50627e9e3f940550d41 Nov-08 18:52:06.826 [Task submitter] INFO nextflow.Session - [16/e0abf9] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655167_SRR10993913) Nov-08 18:52:11.218 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959571; id: 670; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656986_SRR10995883); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/28/9843215be5912748f20c3e4bed2bf5 started: 1731120665494; exited: 2024-11-09T02:52:09.195428892Z; ] Nov-08 18:52:11.399 [Task submitter] INFO nextflow.Session - [83/16f434] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7656986_SRR10995883) Nov-08 18:52:11.405 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 909; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7656986_SRR10995883); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/83/16f43440e004c94ec293659fec1bc8] Nov-08 18:52:12.099 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040023_SRR22059169) > jobId: 21959713; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/0a/ed074bea4b07fd5fd38c2bd6ee9949 Nov-08 18:52:12.099 [Task submitter] INFO nextflow.Session - [0a/ed074b] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040023_SRR22059169) Nov-08 18:52:15.496 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959205; id: 739; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644322_SRR8856667); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/b4/a054f9d16e0d429f63fd3d78bebdf2 started: 1731120515550; exited: 2024-11-09T02:52:12.900882419Z; ] Nov-08 18:52:15.507 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959550; id: 748; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845513_SRR13430596); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/33/7753fb00dc12f0dd0137b29f1f9fcb started: 1731120510563; exited: 2024-11-09T02:52:13.7627512Z; ] Nov-08 18:52:15.563 [Task submitter] INFO nextflow.Session - [6e/7fb72e] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX5644322_SRR8856667) Nov-08 18:52:15.565 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 910; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX5644322_SRR8856667); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/6e/7fb72ea6527c3d0833d7b984e53ede] Nov-08 18:52:15.578 [Task submitter] INFO nextflow.Session - [ee/fa4156] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845513_SRR13430596) Nov-08 18:52:15.602 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 911; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845513_SRR13430596); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ee/fa41569159d2fb2349ac2e62f41580] Nov-08 18:52:16.146 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040034_SRR22059156) > jobId: 21959716; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/68/1724c38728575631712bc956a21e29 Nov-08 18:52:16.146 [Task submitter] INFO nextflow.Session - [68/1724c3] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040034_SRR22059156) Nov-08 18:52:17.257 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040030_SRR22059159) > jobId: 21959717; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/30/3ed82ce80d3aa3d1ced2483f4715d9 Nov-08 18:52:17.257 [Task submitter] INFO nextflow.Session - [30/3ed82c] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040030_SRR22059159) Nov-08 18:52:20.520 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959559; id: 826; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845504_SRR13430605); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/db/10517c166519240facfcf67ddb6688 started: 1731120550567; exited: 2024-11-09T02:52:19.483562803Z; ] Nov-08 18:52:20.844 [Task submitter] INFO nextflow.Session - [3d/43607e] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845504_SRR13430605) Nov-08 18:52:20.849 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 912; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845504_SRR13430605); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/3d/43607e16a1b0d98f4e04737b8da364] Nov-08 18:52:21.400 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845516_SRR13430593) > jobId: 21959718; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/62/5785f54c7194587fb62ed14be715c2 Nov-08 18:52:21.400 [Task submitter] INFO nextflow.Session - [62/5785f5] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845516_SRR13430593) Nov-08 18:52:30.503 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959055; id: 727; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644331_SRR8856658); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/a4/23b5a624b3a889c12e2a0ffe1d250a started: 1731120510495; exited: 2024-11-09T02:52:28.328969585Z; ] Nov-08 18:52:30.677 [Task submitter] INFO nextflow.Session - [8d/2da9ae] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX5644331_SRR8856658) Nov-08 18:52:30.682 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 913; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX5644331_SRR8856658); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/8d/2da9aea78335385c0bf95e4bdb4b33] Nov-08 18:52:31.089 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845519_SRR13430590) > jobId: 21959722; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/be/b10bede5081364738fc0e1b8a1e28b Nov-08 18:52:31.089 [Task submitter] INFO nextflow.Session - [be/b10bed] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845519_SRR13430590) Nov-08 18:52:35.520 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959193; id: 730; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644315_SRR8856674); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/c7/8901d6c493c2fe6da4e725aaabc9be started: 1731120510505; exited: 2024-11-09T02:52:31.149964086Z; ] Nov-08 18:52:35.524 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959198; id: 731; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644327_SRR8856662); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/08/89dc75b619f8122aa3e0b10578609c started: 1731120510513; exited: 2024-11-09T02:52:32.83793498Z; ] Nov-08 18:52:35.548 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959573; id: 768; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655177_SRR10993903); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/7f/f4758f657802dcabc692eaa9b7501e started: 1731120660494; exited: 2024-11-09T02:52:31.377267275Z; ] Nov-08 18:52:35.602 [Task submitter] INFO nextflow.Session - [80/e3bec7] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX5644315_SRR8856674) Nov-08 18:52:35.643 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 914; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX5644315_SRR8856674); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/80/e3bec787391981d6e4ffaa907a0a2e] Nov-08 18:52:35.741 [Task submitter] INFO nextflow.Session - [58/fbe7c1] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7655177_SRR10993903) Nov-08 18:52:35.759 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 915; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7655177_SRR10993903); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/58/fbe7c107c15c4d92debbc1031d924c] Nov-08 18:52:36.549 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655179_SRR10993901) > jobId: 21959730; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/7d/7a2f45f96d5443849294ac6aca75cb Nov-08 18:52:36.549 [Task submitter] INFO nextflow.Session - [7d/7a2f45] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655179_SRR10993901) Nov-08 18:52:36.607 [Task submitter] INFO nextflow.Session - [34/cb4164] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX5644327_SRR8856662) Nov-08 18:52:36.617 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 916; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX5644327_SRR8856662); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/34/cb41648a036809a304dcd54dd60326] Nov-08 18:52:37.448 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040047_SRR22059146) > jobId: 21959732; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/29/4ad22fe4d5d726444c379a96411663 Nov-08 18:52:37.448 [Task submitter] INFO nextflow.Session - [29/4ad22f] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040047_SRR22059146) Nov-08 18:52:38.346 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655170_SRR10993910) > jobId: 21959733; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/18/383fdc28dd42f757bbb6274e5ee6ec Nov-08 18:52:38.346 [Task submitter] INFO nextflow.Session - [18/383fdc] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655170_SRR10993910) Nov-08 18:52:45.509 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959457; id: 808; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655161_SRR10993919); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/7b/b5a1d7cce4a5fa3048195736e1351e started: 1731120515616; exited: 2024-11-09T02:52:41.823053276Z; ] Nov-08 18:52:45.523 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959566; id: 596; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430585); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/40/ac589f17da1a330474876c6aa8ce56 started: 1731120550599; exited: 2024-11-09T02:52:44.613678882Z; ] Nov-08 18:52:45.537 [Task submitter] INFO nextflow.Session - [a9/a116b2] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7655161_SRR10993919) Nov-08 18:52:45.539 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 917; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7655161_SRR10993919); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/a9/a116b2ba6e652daa095f85596fb0e9] Nov-08 18:52:46.251 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059130) > jobId: 21959752; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/30/e33d42472c76fc7d5394afccbc9788 Nov-08 18:52:46.251 [Task submitter] INFO nextflow.Session - [30/e33d42] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059130) Nov-08 18:52:47.615 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059145) > jobId: 21959753; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/bb/f31c7fd47b2dee7e468df1bb6979ea Nov-08 18:52:47.615 [Task submitter] INFO nextflow.Session - [bb/f31c7f] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059145) Nov-08 18:52:55.512 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959568; id: 607; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856681); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/2d/fae0289bdbd62259fecc47f482a192 started: 1731120625487; exited: 2024-11-09T02:52:50.986158743Z; ] Nov-08 18:52:56.062 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430579) > jobId: 21959757; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/23/947f24446f20bde3704160751b9220 Nov-08 18:52:56.062 [Task submitter] INFO nextflow.Session - [23/947f24] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430579) Nov-08 18:53:05.518 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959558; id: 825; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655163_SRR10993917); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/1d/ea0b6a0b2b724abd01ccc52ec267c0 started: 1731120510581; exited: 2024-11-09T02:53:04.70521444Z; ] Nov-08 18:53:05.531 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959562; id: 559; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059147); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/79/4140de14e167111d903b7d87924f34 started: 1731120550575; exited: 2024-11-09T02:53:05.197302149Z; ] Nov-08 18:53:05.678 [Task submitter] INFO nextflow.Session - [ae/7fe845] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7655163_SRR10993917) Nov-08 18:53:05.683 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 921; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7655163_SRR10993917); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ae/7fe845e54ce3be5597eaec17857b3f] Nov-08 18:53:06.232 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845518_SRR13430591) > jobId: 21959758; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/5f/ff417939ca1b81f0f6520e4c253108 Nov-08 18:53:06.232 [Task submitter] INFO nextflow.Session - [5f/ff4179] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845518_SRR13430591) Nov-08 18:53:07.234 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040004_SRR22059187) > jobId: 21959759; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/6b/5956da4845ae2df3a81c1b67245756 Nov-08 18:53:07.234 [Task submitter] INFO nextflow.Session - [6b/5956da] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040004_SRR22059187) Nov-08 18:53:10.604 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959580; id: 797; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655173_SRR10993907); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/c8/4fff44632c30c34633a7d142f6335e started: 1731120731218; exited: 2024-11-09T02:53:09.048136469Z; ] Nov-08 18:53:10.641 [Task submitter] INFO nextflow.Session - [a7/0ef6f0] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7655173_SRR10993907) Nov-08 18:53:10.665 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 922; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7655173_SRR10993907); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/a7/0ef6f00e22e89757233892ca00546f] Nov-08 18:53:11.089 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040054_SRR22059137) > jobId: 21959760; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/95/014cdac6e7f41307ed8f20f9be5f74 Nov-08 18:53:11.089 [Task submitter] INFO nextflow.Session - [95/014cda] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040054_SRR22059137) Nov-08 18:53:15.510 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959502; id: 715; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644312_SRR8856677); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/00/98c836ad2952c5d3bb8560064b1304 started: 1731120515627; exited: 2024-11-09T02:53:12.778156034Z; ] Nov-08 18:53:15.515 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959548; id: 729; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644336_SRR8856653); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/0d/33d3d0d4d13ad1830b1af26286ed29 started: 1731120515652; exited: 2024-11-09T02:53:12.777831909Z; ] Nov-08 18:53:15.523 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959569; id: 618; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430608); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/bb/ddf5a5b053a578b1d8b66d8cfb490c started: 1731120625492; exited: 2024-11-09T02:53:11.446222759Z; ] Nov-08 18:53:15.556 [Task submitter] INFO nextflow.Session - [c4/ff7d69] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX5644336_SRR8856653) Nov-08 18:53:15.560 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 924; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX5644336_SRR8856653); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/c4/ff7d694bb250d52a6f764ef4de09c4] Nov-08 18:53:15.583 [Task submitter] INFO nextflow.Session - [00/6a7ebf] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX5644312_SRR8856677) Nov-08 18:53:15.591 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 925; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX5644312_SRR8856677); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/00/6a7ebf048e5cfbfe6ae6781997f71a] Nov-08 18:53:16.407 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655154_SRR10993926) > jobId: 21959761; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/bd/1ad7aa2e0ccfc12c6173812c036fb0 Nov-08 18:53:16.407 [Task submitter] INFO nextflow.Session - [bd/1ad7aa] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655154_SRR10993926) Nov-08 18:53:17.439 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845503_SRR13430606) > jobId: 21959764; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/65/a1ae70507f7f7747f9b006f786f34f Nov-08 18:53:17.440 [Task submitter] INFO nextflow.Session - [65/a1ae70] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845503_SRR13430606) Nov-08 18:53:19.632 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644332_SRR8856657) > jobId: 21959765; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/25/74fa472571ff1636417925e44920a0 Nov-08 18:53:19.632 [Task submitter] INFO nextflow.Session - [25/74fa47] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644332_SRR8856657) Nov-08 18:53:21.404 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > No more task to compute -- The following nodes are still active: [process] NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP status=ACTIVE port 0: (queue) OPEN ; channel: - port 1: (value) bound ; channel: ncbi_settings port 2: (value) bound ; channel: certificate port 3: (cntrl) - ; channel: $ [process] NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET status=ACTIVE port 0: (queue) OPEN ; channel: meta port 1: (value) bound ; channel: pipeline port 2: (value) bound ; channel: strandedness port 3: (value) bound ; channel: mapping_fields port 4: (cntrl) - ; channel: $ [process] NFCORE_FETCHNGS:SRA:MULTIQC_MAPPINGS_CONFIG status=ACTIVE port 0: (queue) OPEN ; channel: csv port 1: (cntrl) - ; channel: $ Nov-08 18:53:25.521 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor slurm > tasks to be completed: 100 -- submitted tasks are shown below ~> TaskHandler[jobId: 21958903; id: 603; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059166); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/02/af9df9b377c3f97fcb570cef40718a started: 1731120170455; exited: -; ] ~> TaskHandler[jobId: 21958951; id: 762; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040053_SRR22059138); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/aa/4b47e18d98621f49f69f38da5e9521 started: 1731120170608; exited: -; ] ~> TaskHandler[jobId: 21958952; id: 766; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040012_SRR22059180); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/99/ec002fe1de155c2b611b5da06ca459 started: 1731120400464; exited: -; ] ~> TaskHandler[jobId: 21958968; id: 713; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040018_SRR22059174); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/58/a1375f8a18e33add02c93e9ff56e2b started: 1731120510460; exited: -; ] ~> TaskHandler[jobId: 21958969; id: 714; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040040_SRR22059150); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ea/d4401b8f57fdba3bcd7736563a08ab started: 1731120515452; exited: -; ] ~> TaskHandler[jobId: 21958971; id: 753; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040052_SRR22059139); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/2d/dd7a65358a09e83a7542f6406fbb3e started: 1731120515458; exited: -; ] ~> TaskHandler[jobId: 21959003; id: 763; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644337_SRR8856652); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/a6/a1f83596209fd2880ccb15ad8f6769 started: 1731120515464; exited: -; ] ~> TaskHandler[jobId: 21959019; id: 769; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040035_SRR22059155); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/6f/8e32802bc0c69fb83334a4469581ba started: 1731120515470; exited: -; ] ~> TaskHandler[jobId: 21959020; id: 770; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040038_SRR22059151); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/dc/812cec86a255666eb8b84f44f7942c started: 1731120520451; exited: -; ] ~> TaskHandler[jobId: 21959021; id: 771; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644310_SRR8856679); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/00/d74050530b43fd65f14bf9428319cc started: 1731120515483; exited: 2024-11-09T02:53:25.471050262Z; ] .. remaining tasks omitted. Nov-08 18:53:25.522 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959021; id: 771; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644310_SRR8856679); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/00/d74050530b43fd65f14bf9428319cc started: 1731120515483; exited: 2024-11-09T02:53:25.471050262Z; ] Nov-08 18:53:25.528 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959582; id: 804; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655152_SRR10993928); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/01/7f6c88a5095dedc7a7ec0d7e6feef8 started: 1731120731219; exited: 2024-11-09T02:53:23.771730846Z; ] Nov-08 18:53:25.566 [Task submitter] INFO nextflow.Session - [bc/cc1367] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX5644310_SRR8856679) Nov-08 18:53:25.568 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 926; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX5644310_SRR8856679); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/bc/cc1367f50a411c779eee4848114d16] Nov-08 18:53:25.577 [Task submitter] INFO nextflow.Session - [30/26e0a6] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7655152_SRR10993928) Nov-08 18:53:25.579 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 927; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7655152_SRR10993928); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/30/26e0a6db36142e860a3a565b9a3725] Nov-08 18:53:26.236 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845526_SRR13430583) > jobId: 21959767; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/7e/03290aba98ecca0f0108671bd56320 Nov-08 18:53:26.236 [Task submitter] INFO nextflow.Session - [7e/03290a] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845526_SRR13430583) Nov-08 18:53:27.340 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644305_SRR8856684) > jobId: 21959768; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/24/4464e79498c8eb848a8ea6bb722a61 Nov-08 18:53:27.341 [Task submitter] INFO nextflow.Session - [24/4464e7] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644305_SRR8856684) Nov-08 18:53:30.555 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959680; id: 623; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430572); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/db/2fd548f39b652d7c1d98af9a5becb4 started: 1731120660522; exited: 2024-11-09T02:53:29.166567184Z; ] Nov-08 18:53:30.569 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959698; id: 652; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993927); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/b7/69739d7d4fe4a071555a98fb2e85db started: 1731120731220; exited: 2024-11-09T02:53:27.971608255Z; ] Nov-08 18:53:31.210 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845506_SRR13430603) > jobId: 21959769; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/b3/d2fe1004330a2a1bd1cc039c5fe3a7 Nov-08 18:53:31.210 [Task submitter] INFO nextflow.Session - [b3/d2fe10] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845506_SRR13430603) Nov-08 18:53:32.151 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845531_SRR13430578) > jobId: 21959771; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/60/5716b40f8d89c441a20a0c28a28247 Nov-08 18:53:32.151 [Task submitter] INFO nextflow.Session - [60/5716b4] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845531_SRR13430578) Nov-08 18:53:35.537 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958952; id: 766; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040012_SRR22059180); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/99/ec002fe1de155c2b611b5da06ca459 started: 1731120400464; exited: 2024-11-09T02:53:32.820286469Z; ] Nov-08 18:53:35.551 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959203; id: 738; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644318_SRR8856671); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/51/310134177d20d86080592beeb710fc started: 1731120510535; exited: 2024-11-09T02:53:34.983571743Z; ] Nov-08 18:53:35.579 [Task submitter] INFO nextflow.Session - [b3/66aa39] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040012_SRR22059180) Nov-08 18:53:35.581 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 930; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040012_SRR22059180); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/b3/66aa396040b5dfc7030991eda02769] Nov-08 18:53:35.605 [Task submitter] INFO nextflow.Session - [73/446c96] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX5644318_SRR8856671) Nov-08 18:53:35.607 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 931; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX5644318_SRR8856671); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/73/446c96d23bba01763771021c3482b4] Nov-08 18:53:36.336 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655172_SRR10993908) > jobId: 21959772; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/1a/5477aadab1d527ff2c07c6b7088017 Nov-08 18:53:36.336 [Task submitter] INFO nextflow.Session - [1a/5477aa] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655172_SRR10993908) Nov-08 18:53:37.332 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040026_SRR22059164) > jobId: 21959774; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/c2/f2807ed578829f5d091f1a49fe42a3 Nov-08 18:53:37.332 [Task submitter] INFO nextflow.Session - [c2/f2807e] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040026_SRR22059164) Nov-08 18:53:50.548 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959253; id: 774; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644306_SRR8856683); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/1e/50ce0259c7c0b448d3e7f2a6f56355 started: 1731120515566; exited: 2024-11-09T02:53:49.133054895Z; ] Nov-08 18:53:50.561 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959561; id: 844; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845507_SRR13430602); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/51/ac57edb22be7d338dedb73fab9e6c6 started: 1731120660478; exited: 2024-11-09T02:53:48.359530518Z; ] Nov-08 18:53:50.727 [Task submitter] INFO nextflow.Session - [12/1ae9a7] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845507_SRR13430602) Nov-08 18:53:50.748 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 933; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845507_SRR13430602); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/12/1ae9a76be650af544d7dccc09a2c0b] Nov-08 18:53:50.768 [Task submitter] DEBUG n.processor.TaskPollingMonitor - %% executor local > tasks in the submission queue: 1 -- tasks to be submitted are shown below ~> TaskHandler[id: 932; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX5644306_SRR8856683); status: NEW; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/c5/06ed2921a12fd191bac173227094cb] Nov-08 18:53:51.104 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059163) > jobId: 21959780; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/4c/e1c284381bc57d096c2c3d196ca0df Nov-08 18:53:51.104 [Task submitter] INFO nextflow.Session - [4c/e1c284] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059163) Nov-08 18:53:51.729 [Task submitter] INFO nextflow.Session - [c5/06ed29] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX5644306_SRR8856683) Nov-08 18:53:51.765 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 932; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX5644306_SRR8856683); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/c5/06ed2921a12fd191bac173227094cb] Nov-08 18:53:52.388 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430566) > jobId: 21959782; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/0c/290d59eac11c46134339a011fe5d7e Nov-08 18:53:52.388 [Task submitter] INFO nextflow.Session - [0c/290d59] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430566) Nov-08 18:53:55.563 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958951; id: 762; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040053_SRR22059138); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/aa/4b47e18d98621f49f69f38da5e9521 started: 1731120170608; exited: 2024-11-09T02:53:55.279297574Z; ] Nov-08 18:53:55.642 [Task submitter] INFO nextflow.Session - [29/90fed1] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040053_SRR22059138) Nov-08 18:53:55.672 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 934; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040053_SRR22059138); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/29/90fed1a286097439fa21e90e49d92d] Nov-08 18:53:57.461 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430574) > jobId: 21959787; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/55/d5f33721ab37b89a12f01081365e5c Nov-08 18:53:57.461 [Task submitter] INFO nextflow.Session - [55/d5f337] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430574) Nov-08 18:54:00.572 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959027; id: 555; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059128); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/74/d250d6f384706d5234e972fb7b27f6 started: 1731120170661; exited: 2024-11-09T02:53:57.535537473Z; ] Nov-08 18:54:01.293 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656976_SRR10995893) > jobId: 21959803; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/64/d8f8269dcf303258535a5d98bbcf0b Nov-08 18:54:01.293 [Task submitter] INFO nextflow.Session - [64/d8f826] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656976_SRR10995893) Nov-08 18:54:15.556 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958903; id: 603; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059166); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/02/af9df9b377c3f97fcb570cef40718a started: 1731120170455; exited: 2024-11-09T02:54:11.874707451Z; ] Nov-08 18:54:16.072 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040059_SRR22059132) > jobId: 21959823; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/bf/ab33a4773b0526bbcf343f1cef3f04 Nov-08 18:54:16.072 [Task submitter] INFO nextflow.Session - [bf/ab33a4] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040059_SRR22059132) Nov-08 18:54:30.555 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959567; id: 605; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856678); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/6c/f063a22a00da9a3c27cfaeb76d1877 started: 1731120625479; exited: 2024-11-09T02:54:30.211163913Z; ] Nov-08 18:54:31.534 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040043_SRR22059147) > jobId: 21959824; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/3a/586770a36328639c2886bc10f293ac Nov-08 18:54:31.534 [Task submitter] INFO nextflow.Session - [3a/586770] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040043_SRR22059147) Nov-08 18:54:45.568 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959574; id: 767; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845532_SRR13430577); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/c9/0bc3dd487d8ec8977b7fe23687e8b8 started: 1731120660501; exited: 2024-11-09T02:54:43.244452303Z; ] Nov-08 18:54:45.603 [Task submitter] INFO nextflow.Session - [e6/e77d32] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845532_SRR13430577) Nov-08 18:54:45.607 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 938; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845532_SRR13430577); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/e6/e77d324d81e9ad47ad8240ddcdfdd3] Nov-08 18:54:46.270 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993914) > jobId: 21959826; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/42/860c3fd4700e0e53292b784c28529d Nov-08 18:54:46.270 [Task submitter] INFO nextflow.Session - [42/860c3f] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993914) Nov-08 18:54:50.555 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959003; id: 763; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644337_SRR8856652); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/a6/a1f83596209fd2880ccb15ad8f6769 started: 1731120515464; exited: 2024-11-09T02:54:46.351456285Z; ] Nov-08 18:54:50.621 [Task submitter] INFO nextflow.Session - [38/200ad4] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX5644337_SRR8856652) Nov-08 18:54:50.628 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 939; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX5644337_SRR8856652); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/38/200ad4aa4691892737c575659cc6b0] Nov-08 18:54:51.250 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656966_SRR10995903) > jobId: 21959828; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/f4/6edf1e3b8878ddb0dc2926b157f149 Nov-08 18:54:51.250 [Task submitter] INFO nextflow.Session - [f4/6edf1e] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656966_SRR10995903) Nov-08 18:55:00.555 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959570; id: 653; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856650); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/c3/5cc3ac6261d53e298ecc317ff43b47 started: 1731120625499; exited: 2024-11-09T02:54:59.841662347Z; ] Nov-08 18:55:01.069 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656995_SRR10995874) > jobId: 21959829; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/5c/2a0a13171e0885bb2d946c0a178a29 Nov-08 18:55:01.069 [Task submitter] INFO nextflow.Session - [5c/2a0a13] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656995_SRR10995874) Nov-08 18:55:05.555 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959612; id: 557; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059148); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/16/3da11b646fdfebb0fac666e9e66be6 started: 1731120625515; exited: 2024-11-09T02:55:03.421814672Z; ] Nov-08 18:55:06.169 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644307_SRR8856682) > jobId: 21959832; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/44/06ed153f9a8d06363a3ddbe81737c7 Nov-08 18:55:06.169 [Task submitter] INFO nextflow.Session - [44/06ed15] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644307_SRR8856682) Nov-08 18:55:25.563 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959549; id: 742; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040020_SRR22059172); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/e5/ce4ed867aa9dee18b5c3fe8348f0b1 started: 1731120515656; exited: 2024-11-09T02:55:24.624908886Z; ] Nov-08 18:55:25.649 [Task submitter] INFO nextflow.Session - [01/0bb027] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040020_SRR22059172) Nov-08 18:55:25.651 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 942; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040020_SRR22059172); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/01/0bb027398d3a12cb7fda8fd08712d7] Nov-08 18:55:26.168 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059133) > jobId: 21959844; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/f5/edcc3b3acf92c2afc17429b1e69821 Nov-08 18:55:26.168 [Task submitter] INFO nextflow.Session - [f5/edcc3b] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059133) Nov-08 18:55:30.601 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959209; id: 741; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040021_SRR22059171); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/34/1d5cabcafe31ad0c04e82f8426f0dc started: 1731120515557; exited: 2024-11-09T02:55:28.828787647Z; ] Nov-08 18:55:30.682 [Task submitter] INFO nextflow.Session - [ab/423c22] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040021_SRR22059171) Nov-08 18:55:30.706 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 943; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040021_SRR22059171); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ab/423c22066fd24da4d589dd8e7af8f6] Nov-08 18:55:31.155 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430594) > jobId: 21959849; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/28/0a999620502533a92a1ddeccd595ec Nov-08 18:55:31.155 [Task submitter] INFO nextflow.Session - [28/0a9996] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430594) Nov-08 18:55:45.567 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959585; id: 818; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845511_SRR13430598); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/18/be7280955bb72363084842c4905dab started: 1731120840626; exited: 2024-11-09T02:55:43.999371228Z; ] Nov-08 18:55:45.761 [Task submitter] INFO nextflow.Session - [bf/2f6118] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845511_SRR13430598) Nov-08 18:55:45.764 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 944; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845511_SRR13430598); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/bf/2f61182baa9ab5d78c224ccdd69b04] Nov-08 18:55:46.123 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845521_SRR13430588) > jobId: 21959861; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/38/7799b50be29285c14f8220539d5deb Nov-08 18:55:46.123 [Task submitter] INFO nextflow.Session - [38/7799b5] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845521_SRR13430588) Nov-08 18:55:55.563 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959200; id: 732; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040005_SRR22059186); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/94/5aa60409cb43e6229557883d038c21 started: 1731120510522; exited: 2024-11-09T02:55:52.511579753Z; ] Nov-08 18:55:55.629 [Task submitter] INFO nextflow.Session - [f5/97eb2d] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040005_SRR22059186) Nov-08 18:55:55.632 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 945; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040005_SRR22059186); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/f5/97eb2dcf125219b2f10354bc9bede6] Nov-08 18:55:56.244 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040039_SRR22059154) > jobId: 21959862; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/3b/dc4a9ef3e6d29944bcd94734b1353e Nov-08 18:55:56.244 [Task submitter] INFO nextflow.Session - [3b/dc4a9e] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040039_SRR22059154) Nov-08 18:56:05.594 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959697; id: 548; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059131); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/6c/dcf0b209d67c784d9ceeb28c9326c0 started: 1731120731219; exited: 2024-11-09T02:56:03.912498714Z; ] Nov-08 18:56:06.056 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644339_SRR8856650) > jobId: 21959870; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/b8/dad1eafb68beff596018944b44dd07 Nov-08 18:56:06.056 [Task submitter] INFO nextflow.Session - [b8/dad1ea] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644339_SRR8856650) Nov-08 18:56:10.563 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959590; id: 546; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059127); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ab/cd02ba3996468104fe079fe540aa12 started: 1731120625504; exited: 2024-11-09T02:56:09.444369964Z; ] Nov-08 18:56:10.568 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959663; id: 787; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655174_SRR10993906); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/46/04a5bd34685dcb554332a65290d360 started: 1731120910707; exited: 2024-11-09T02:56:06.037685526Z; ] Nov-08 18:56:10.634 [Task submitter] INFO nextflow.Session - [6f/89495e] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7655174_SRR10993906) Nov-08 18:56:10.636 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 948; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7655174_SRR10993906); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/6f/89495ec6c2ea9fd574b15eeae2118b] Nov-08 18:56:11.136 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059157) > jobId: 21959883; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/0b/a75177a114df406c4836338393f07b Nov-08 18:56:11.136 [Task submitter] INFO nextflow.Session - [0b/a75177] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059157) Nov-08 18:56:12.068 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430570) > jobId: 21959884; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/be/54a78a858d7803c2045a9413530942 Nov-08 18:56:12.068 [Task submitter] INFO nextflow.Session - [be/54a78a] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430570) Nov-08 18:56:40.569 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959602; id: 861; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655162_SRR10993918); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/0d/7d2b793896910c7d91e43ee1fc8aa0 started: 1731120910688; exited: 2024-11-09T02:56:37.696460028Z; ] Nov-08 18:56:40.573 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959699; id: 660; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993916); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/36/33bd072f9f3bc964cb909d787747f7 started: 1731120840639; exited: 2024-11-09T02:56:39.590743349Z; ] Nov-08 18:56:40.610 [Task submitter] INFO nextflow.Session - [f1/038b29] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7655162_SRR10993918) Nov-08 18:56:40.627 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 950; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7655162_SRR10993918); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/f1/038b29d456dbc9c24ec2126dad645d] Nov-08 18:56:41.150 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845537_SRR13430572) > jobId: 21959891; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/37/c56a62d0eee7945cc24162af6b446e Nov-08 18:56:41.150 [Task submitter] INFO nextflow.Session - [37/c56a62] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845537_SRR13430572) Nov-08 18:56:42.060 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655153_SRR10993927) > jobId: 21959892; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/bb/06714076c20ea45438594563b9fe2e Nov-08 18:56:42.060 [Task submitter] INFO nextflow.Session - [bb/067140] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655153_SRR10993927) Nov-08 18:56:45.564 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958969; id: 714; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040040_SRR22059150); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ea/d4401b8f57fdba3bcd7736563a08ab started: 1731120515452; exited: 2024-11-09T02:56:42.061323916Z; ] Nov-08 18:56:45.572 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959678; id: 551; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059134); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/b0/58e18b1c6ff69880b7c887095a8769 started: 1731120660514; exited: 2024-11-09T02:56:44.058665988Z; ] Nov-08 18:56:45.649 [Task submitter] INFO nextflow.Session - [ad/4deed9] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040040_SRR22059150) Nov-08 18:56:45.654 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 952; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040040_SRR22059150); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ad/4deed9f775cfd00ca00df5e4ce347b] Nov-08 18:56:46.095 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040042_SRR22059148) > jobId: 21959895; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/6c/82182208a90b28430418c357a9884e Nov-08 18:56:46.095 [Task submitter] INFO nextflow.Session - [6c/821822] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040042_SRR22059148) Nov-08 18:56:47.225 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040060_SRR22059131) > jobId: 21959896; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/41/d56b5db70d31a68a5a0433577d9433 Nov-08 18:56:47.225 [Task submitter] INFO nextflow.Session - [41/d56b5d] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040060_SRR22059131) Nov-08 18:56:50.572 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958968; id: 713; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040018_SRR22059174); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/58/a1375f8a18e33add02c93e9ff56e2b started: 1731120510460; exited: 2024-11-09T02:56:47.55086113Z; ] Nov-08 18:56:50.583 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959669; id: 695; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656992_SRR10995877); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d2/f0da775a58647de8c61bbc446ee6c5 started: 1731120985570; exited: 2024-11-09T02:56:49.214222263Z; ] Nov-08 18:56:50.660 [Task submitter] INFO nextflow.Session - [ca/267aa7] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040018_SRR22059174) Nov-08 18:56:50.672 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 953; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040018_SRR22059174); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ca/267aa781d8c56f7c90588ddb3625dc] Nov-08 18:56:51.359 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059129) > jobId: 21959902; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/56/d223d79dcf1c5644681eb2aecc3667 Nov-08 18:56:51.359 [Task submitter] INFO nextflow.Session - [56/d223d7] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059129) Nov-08 18:56:51.671 [Task submitter] INFO nextflow.Session - [15/f5ad42] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7656992_SRR10995877) Nov-08 18:56:51.706 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 954; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7656992_SRR10995877); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/15/f5ad4202c83a8b99e754ed33245940] Nov-08 18:56:52.311 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059158) > jobId: 21959903; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/78/80f5f8efadfb0ecffab4e0a4b72152 Nov-08 18:56:52.311 [Task submitter] INFO nextflow.Session - [78/80f5f8] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059158) Nov-08 18:57:05.570 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959601; id: 859; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655178_SRR10993902); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/92/4cbc2bca2b14c6e3d59704604fd885 started: 1731120910680; exited: 2024-11-09T02:57:02.815629613Z; ] Nov-08 18:57:05.658 [Task submitter] INFO nextflow.Session - [77/ba6d20] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7655178_SRR10993902) Nov-08 18:57:05.661 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 955; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7655178_SRR10993902); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/77/ba6d2078686291e6d9aaaaa049d47d] Nov-08 18:57:06.077 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040051_SRR22059140) > jobId: 21959909; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d6/268fccdf2ba32f19a85cead68ee204 Nov-08 18:57:06.077 [Task submitter] INFO nextflow.Session - [d6/268fcc] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040051_SRR22059140) Nov-08 18:57:10.565 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959056; id: 728; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040016_SRR22059176); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/3b/e2a79b78161c08ba51c77e01de93e6 started: 1731120515529; exited: 2024-11-09T02:57:06.079548017Z; ] Nov-08 18:57:10.576 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959611; id: 553; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059136); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/00/97fcc94196cc77f1c2efb9fb1f03c6 started: 1731120625509; exited: 2024-11-09T02:57:06.631536007Z; ] Nov-08 18:57:10.720 [Task submitter] INFO nextflow.Session - [4e/6be185] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040016_SRR22059176) Nov-08 18:57:10.725 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 957; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040016_SRR22059176); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/4e/6be185f4d5211bdb5c7c1594026665] Nov-08 18:57:11.104 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845522_SRR13430587) > jobId: 21959916; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/13/30e8c8e5d7ffdfe3223d5e0d1a2976 Nov-08 18:57:11.105 [Task submitter] INFO nextflow.Session - [13/30e8c8] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845522_SRR13430587) Nov-08 18:57:12.254 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644329_SRR8856660) > jobId: 21959917; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/7e/de49111fc778c0adefef3451481ff1 Nov-08 18:57:12.254 [Task submitter] INFO nextflow.Session - [7e/de4911] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644329_SRR8856660) Nov-08 18:57:20.575 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959600; id: 821; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845512_SRR13430597); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/9b/d724c919a852dd66235771af21083d started: 1731120910677; exited: 2024-11-09T02:57:18.884061232Z; ] Nov-08 18:57:20.667 [Task submitter] INFO nextflow.Session - [80/5c2823] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845512_SRR13430597) Nov-08 18:57:20.670 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 958; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845512_SRR13430597); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/80/5c2823f973478e7e7d958352cbbd3e] Nov-08 18:57:21.227 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040063_SRR22059128) > jobId: 21959924; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/df/fcead76840ac1f62ad4d534a81afed Nov-08 18:57:21.227 [Task submitter] INFO nextflow.Session - [df/fcead7] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040063_SRR22059128) Nov-08 18:57:35.578 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959587; id: 855; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845541_SRR13430568); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/7a/aad39aeabd9a3e0866f866c02f3694 started: 1731120910562; exited: 2024-11-09T02:57:32.020925934Z; ] Nov-08 18:57:35.644 [Task submitter] INFO nextflow.Session - [30/1f08a4] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845541_SRR13430568) Nov-08 18:57:35.647 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 959; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845541_SRR13430568); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/30/1f08a40258a4b1671128ab53bb619a] Nov-08 18:57:36.219 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845529_SRR13430580) > jobId: 21959932; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/8f/2e37209e60dc206a84c3313f05181a Nov-08 18:57:36.219 [Task submitter] INFO nextflow.Session - [8f/2e3720] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845529_SRR13430580) Nov-08 18:57:45.572 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959610; id: 872; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655156_SRR10993924); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/be/9cc11b040f6715048739ee7b8fbc0b started: 1731120910700; exited: 2024-11-09T02:57:43.844498401Z; ] Nov-08 18:57:45.627 [Task submitter] INFO nextflow.Session - [15/99a960] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7655156_SRR10993924) Nov-08 18:57:45.630 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 960; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7655156_SRR10993924); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/15/99a960417eeb1c247616859cd842d5] Nov-08 18:57:46.215 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644309_SRR8856680) > jobId: 21959947; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/27/a2856dfed57691cae3ca2846ab8988 Nov-08 18:57:46.215 [Task submitter] INFO nextflow.Session - [27/a2856d] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644309_SRR8856680) Nov-08 18:58:00.573 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959613; id: 564; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059160); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ef/0f83c0debfca18ba4aa2b24b651b97 started: 1731120625527; exited: 2024-11-09T02:57:55.763704499Z; ] Nov-08 18:58:01.067 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993921) > jobId: 21959951; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/11/229b4e8794a6864b362fae3c061dfe Nov-08 18:58:01.068 [Task submitter] INFO nextflow.Session - [11/229b4e] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993921) Nov-08 18:58:10.578 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959594; id: 745; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644320_SRR8856669); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/dd/4f3aeda593890964b937813c95d87d started: 1731120910660; exited: 2024-11-09T02:58:09.926810327Z; ] Nov-08 18:58:10.593 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959596; id: 778; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644330_SRR8856659); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/1f/e226499803de961d0f98fa50e48934 started: 1731120910668; exited: 2024-11-09T02:58:09.00982745Z; ] Nov-08 18:58:10.600 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959671; id: 798; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655157_SRR10993923); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/21/4afe725a68a519100d251ea00080ff started: 1731121025580; exited: 2024-11-09T02:58:05.70627353Z; ] Nov-08 18:58:10.616 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959757; id: 626; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430579); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/23/947f24446f20bde3704160751b9220 started: 1731120910713; exited: 2024-11-09T02:58:05.773682421Z; ] Nov-08 18:58:10.624 [Task submitter] INFO nextflow.Session - [cf/aeb6af] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX5644330_SRR8856659) Nov-08 18:58:10.626 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 962; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX5644330_SRR8856659); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/cf/aeb6afdd5d0936c0fdb5ba0cd72dfe] Nov-08 18:58:10.632 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959884; id: 570; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430570); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/be/54a78a858d7803c2045a9413530942 started: 1731121025595; exited: 2024-11-09T02:58:06.459649927Z; ] Nov-08 18:58:10.667 [Task submitter] INFO nextflow.Session - [78/ec6179] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7655157_SRR10993923) Nov-08 18:58:10.685 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 965; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7655157_SRR10993923); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/78/ec61797f315b5fe9a38846be29974a] Nov-08 18:58:11.358 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644334_SRR8856655) > jobId: 21959954; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/3e/ac4839f0448c49971673d2ecba9382 Nov-08 18:58:11.358 [Task submitter] INFO nextflow.Session - [3e/ac4839] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644334_SRR8856655) Nov-08 18:58:11.625 [Task submitter] INFO nextflow.Session - [6f/96a03c] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX5644320_SRR8856669) Nov-08 18:58:11.639 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 966; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX5644320_SRR8856669); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/6f/96a03c52edf8a8ebff94658f0546c7] Nov-08 18:58:12.326 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644317_SRR8856672) > jobId: 21959955; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/07/f96de24cebf683f8125808f7bc9a59 Nov-08 18:58:12.327 [Task submitter] INFO nextflow.Session - [07/f96de2] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644317_SRR8856672) Nov-08 18:58:13.425 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644304_SRR8856685) > jobId: 21959957; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/7b/bb19009d0082e53a4e4f9aceda9e0e Nov-08 18:58:13.425 [Task submitter] INFO nextflow.Session - [7b/bb1900] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644304_SRR8856685) Nov-08 18:58:14.371 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845509_SRR13430600) > jobId: 21959958; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d9/82d3e1fcd2d207ab282fcdb8978710 Nov-08 18:58:14.372 [Task submitter] INFO nextflow.Session - [d9/82d3e1] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845509_SRR13430600) Nov-08 18:58:15.355 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040055_SRR22059135) > jobId: 21959959; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/3c/c774c5bc737a97b166d672e13ee13e Nov-08 18:58:15.355 [Task submitter] INFO nextflow.Session - [3c/c774c5] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040055_SRR22059135) Nov-08 18:58:15.590 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959583; id: 806; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655176_SRR10993904); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/7e/3ec8e6a559357d2dc70932d7486b13 started: 1731120845567; exited: 2024-11-09T02:58:13.268046948Z; ] Nov-08 18:58:15.769 [Task submitter] INFO nextflow.Session - [a8/3db7e8] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7655176_SRR10993904) Nov-08 18:58:15.794 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 967; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7655176_SRR10993904); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/a8/3db7e83e3e17b1f67bca9f9f451b47] Nov-08 18:58:16.353 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040031_SRR22059162) > jobId: 21959960; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/36/9c59b7c19133a645bfbd5cff446136 Nov-08 18:58:16.353 [Task submitter] INFO nextflow.Session - [36/9c59b7] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040031_SRR22059162) Nov-08 18:58:21.484 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > No more task to compute -- The following nodes are still active: [process] NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP status=ACTIVE port 0: (queue) OPEN ; channel: - port 1: (value) bound ; channel: ncbi_settings port 2: (value) bound ; channel: certificate port 3: (cntrl) - ; channel: $ [process] NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET status=ACTIVE port 0: (queue) OPEN ; channel: meta port 1: (value) bound ; channel: pipeline port 2: (value) bound ; channel: strandedness port 3: (value) bound ; channel: mapping_fields port 4: (cntrl) - ; channel: $ [process] NFCORE_FETCHNGS:SRA:MULTIQC_MAPPINGS_CONFIG status=ACTIVE port 0: (queue) OPEN ; channel: csv port 1: (cntrl) - ; channel: $ Nov-08 18:58:25.570 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor slurm > tasks to be completed: 100 -- submitted tasks are shown below ~> TaskHandler[jobId: 21958971; id: 753; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040052_SRR22059139); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/2d/dd7a65358a09e83a7542f6406fbb3e started: 1731120515458; exited: -; ] ~> TaskHandler[jobId: 21959019; id: 769; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040035_SRR22059155); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/6f/8e32802bc0c69fb83334a4469581ba started: 1731120515470; exited: -; ] ~> TaskHandler[jobId: 21959020; id: 770; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040038_SRR22059151); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/dc/812cec86a255666eb8b84f44f7942c started: 1731120520451; exited: -; ] ~> TaskHandler[jobId: 21959022; id: 772; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040008_SRR22059184); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/77/654656d1c4388394a97cfc0dcdcff8 started: 1731120515491; exited: -; ] ~> TaskHandler[jobId: 21959023; id: 779; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040024_SRR22059168); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/33/4091184d771a2485dc33c543914ec5 started: 1731120510469; exited: -; ] ~> TaskHandler[jobId: 21959024; id: 780; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040015_SRR22059177); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/e2/40156bd8814afdf0d3606e7145203f started: 1731120510474; exited: -; ] ~> TaskHandler[jobId: 21959025; id: 785; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040037_SRR22059152); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/02/f2890358631a48a0eb96dea5cbcfdb started: 1731120510481; exited: -; ] ~> TaskHandler[jobId: 21959221; id: 764; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040019_SRR22059173); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/0a/4342c5c67f896a04d41a306d9303b7 started: 1731120515561; exited: -; ] ~> TaskHandler[jobId: 21959266; id: 793; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040046_SRR22059143); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/e9/4bf0ad646fac0d81f24c7e4d7897cd started: 1731120510545; exited: -; ] ~> TaskHandler[jobId: 21959441; id: 760; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040036_SRR22059153); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/24/5bc444c3d8cdf01bd00d5e01559fcd started: 1731120515598; exited: -; ] .. remaining tasks omitted. Nov-08 18:58:25.635 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959753; id: 558; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059145); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/bb/f31c7fd47b2dee7e468df1bb6979ea started: 1731120840666; exited: 2024-11-09T02:58:22.268457379Z; ] Nov-08 18:58:25.646 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959782; id: 569; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430566); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/0c/290d59eac11c46134339a011fe5d7e started: 1731120950578; exited: 2024-11-09T02:58:23.974440422Z; ] Nov-08 18:58:26.063 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040056_SRR22059134) > jobId: 21959968; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/09/33fbbfcb7c4404f5540054604e7505 Nov-08 18:58:26.063 [Task submitter] INFO nextflow.Session - [09/33fbbf] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040056_SRR22059134) Nov-08 18:58:27.061 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040058_SRR22059136) > jobId: 21959970; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/35/ac293b38d4d48102fabe77ac7ecc6d Nov-08 18:58:27.062 [Task submitter] INFO nextflow.Session - [35/ac293b] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040058_SRR22059136) Nov-08 18:58:35.579 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959577; id: 776; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040006_SRR22059167); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/56/ae8410506fac778cc3466d4b025cff started: 1731120665503; exited: 2024-11-09T02:58:32.468414331Z; ] Nov-08 18:58:35.592 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959826; id: 662; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993914); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/42/860c3fd4700e0e53292b784c28529d started: 1731120950590; exited: 2024-11-09T02:58:31.71601765Z; ] Nov-08 18:58:35.618 [Task submitter] INFO nextflow.Session - [5f/c0f04c] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040006_SRR22059167) Nov-08 18:58:35.621 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 971; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040006_SRR22059167); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/5f/c0f04ca132d9678e038b2c8a361915] Nov-08 18:58:36.186 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656990_SRR10995879) > jobId: 21959980; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/bc/0f519a4d1c99c6ce0ebd57878ee70b Nov-08 18:58:36.186 [Task submitter] INFO nextflow.Session - [bc/0f519a] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656990_SRR10995879) Nov-08 18:58:37.267 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656984_SRR10995885) > jobId: 21959981; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/86/7823ee7fa77d55a1d28d3a0b3bdff6 Nov-08 18:58:37.267 [Task submitter] INFO nextflow.Session - [86/7823ee] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656984_SRR10995885) Nov-08 18:58:40.615 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959787; id: 617; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430574); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/55/d5f33721ab37b89a12f01081365e5c started: 1731120950582; exited: 2024-11-09T02:58:36.361501072Z; ] Nov-08 18:58:42.752 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040011_SRR22059181) > jobId: 21959986; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/e6/e092d3c69e3c3df88bbe175d25d5ec Nov-08 18:58:42.753 [Task submitter] INFO nextflow.Session - [e6/e092d3] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040011_SRR22059181) Nov-08 18:58:50.580 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21958971; id: 753; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040052_SRR22059139); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/2d/dd7a65358a09e83a7542f6406fbb3e started: 1731120515458; exited: 2024-11-09T02:58:45.591282811Z; ] Nov-08 18:58:50.588 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959683; id: 692; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656964_SRR10995905); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d8/7dc6b99c1a4e220112964a5bdffc5b started: 1731121096109; exited: 2024-11-09T02:58:45.747830623Z; ] Nov-08 18:58:50.617 [Task submitter] INFO nextflow.Session - [a9/4994a0] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7656964_SRR10995905) Nov-08 18:58:50.623 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 973; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7656964_SRR10995905); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/a9/4994a07e225c0b95a2091e4c911aac] Nov-08 18:58:51.243 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040064_SRR22059127) > jobId: 21959992; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/b4/dc96e0083f89a5b77b17f5288b404d Nov-08 18:58:51.243 [Task submitter] INFO nextflow.Session - [b4/dc96e0] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040064_SRR22059127) Nov-08 18:58:51.620 [Task submitter] INFO nextflow.Session - [78/8e955a] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040052_SRR22059139) Nov-08 18:58:51.654 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 974; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040052_SRR22059139); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/78/8e955ae18875a56e68b9808fc97976] Nov-08 18:58:52.203 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655164_SRR10993916) > jobId: 21959993; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/a6/6c2b4859a636a848310360235a874f Nov-08 18:58:52.203 [Task submitter] INFO nextflow.Session - [a6/6c2b48] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655164_SRR10993916) Nov-08 18:59:05.587 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959849; id: 614; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430594); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/28/0a999620502533a92a1ddeccd595ec started: 1731120985594; exited: 2024-11-09T02:59:01.587675748Z; ] Nov-08 18:59:06.063 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655151_SRR10993929) > jobId: 21959994; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/5c/d1db4df34f17316992ed50ada6b3b9 Nov-08 18:59:06.063 [Task submitter] INFO nextflow.Session - [5c/d1db4d] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655151_SRR10993929) Nov-08 18:59:20.674 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959609; id: 865; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845536_SRR13430573); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/56/c815e88a337582b8fe49244a68b9b2 started: 1731120910694; exited: 2024-11-09T02:59:17.706018539Z; ] Nov-08 18:59:20.718 [Task submitter] INFO nextflow.Session - [06/0e4c3b] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845536_SRR13430573) Nov-08 18:59:20.720 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 976; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845536_SRR13430573); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/06/0e4c3b09b00bd29cadabfeba50b187] Nov-08 18:59:21.180 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845535_SRR13430574) > jobId: 21960014; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/f6/7b0cbe79c7160d6dae7468eb49d772 Nov-08 18:59:21.180 [Task submitter] INFO nextflow.Session - [f6/7b0cbe] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845535_SRR13430574) Nov-08 18:59:25.750 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959752; id: 549; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059130); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/30/e33d42472c76fc7d5394afccbc9788 started: 1731120840656; exited: 2024-11-09T02:59:24.580719766Z; ] Nov-08 18:59:27.489 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644324_SRR8856665) > jobId: 21960015; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/75/a04914f9d161a73c0a93c84b347f8a Nov-08 18:59:27.489 [Task submitter] INFO nextflow.Session - [75/a04914] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644324_SRR8856665) Nov-08 18:59:35.582 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959666; id: 868; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655149_SRR10993931); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/fc/e68a076132b5eb0320c6d73d320567 started: 1731120985561; exited: 2024-11-09T02:59:32.263456385Z; ] Nov-08 18:59:35.666 [Task submitter] INFO nextflow.Session - [5b/5d43f3] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7655149_SRR10993931) Nov-08 18:59:35.670 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 978; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7655149_SRR10993931); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/5b/5d43f3dd4d8b876bd045ef8e1b9ab2] Nov-08 18:59:36.237 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644311_SRR8856678) > jobId: 21960020; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/93/636905cdf09b75d90b8dfbf2c2187b Nov-08 18:59:36.237 [Task submitter] INFO nextflow.Session - [93/636905] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644311_SRR8856678) Nov-08 18:59:40.596 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959675; id: 853; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845500_SRR13430609); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/b2/eaecb936f1ccc6e5feaf15c9a2e49a started: 1731121060592; exited: 2024-11-09T02:59:38.551739907Z; ] Nov-08 18:59:40.601 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959780; id: 566; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059163); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/4c/e1c284381bc57d096c2c3d196ca0df started: 1731120950573; exited: 2024-11-09T02:59:40.488874736Z; ] Nov-08 18:59:40.658 [Task submitter] INFO nextflow.Session - [c1/130dea] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845500_SRR13430609) Nov-08 18:59:40.666 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 980; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845500_SRR13430609); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/c1/130dea41b49ae246a3f7090c602104] Nov-08 18:59:41.269 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040044_SRR22059145) > jobId: 21960024; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/4b/2ea2d3e69507591b705542b3295f5d Nov-08 18:59:41.269 [Task submitter] INFO nextflow.Session - [4b/2ea2d3] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040044_SRR22059145) Nov-08 18:59:42.335 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655166_SRR10993914) > jobId: 21960025; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ad/5a058c1981e311ec52fa29c53954b8 Nov-08 18:59:42.335 [Task submitter] INFO nextflow.Session - [ad/5a058c] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655166_SRR10993914) Nov-08 18:59:45.593 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959677; id: 892; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655150_SRR10993930); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d1/13dd5dac70dc522a266dc422c4ad1a started: 1731121060607; exited: 2024-11-09T02:59:44.476166004Z; ] Nov-08 18:59:45.649 [Task submitter] INFO nextflow.Session - [a3/8c088e] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7655150_SRR10993930) Nov-08 18:59:45.652 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 981; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7655150_SRR10993930); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/a3/8c088e057fde85a09657dd2d4f8fc7] Nov-08 18:59:46.269 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856656) > jobId: 21960026; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/a2/c26f7611c781332ddf2bf765ff80f9 Nov-08 18:59:46.269 [Task submitter] INFO nextflow.Session - [a2/c26f76] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856656) Nov-08 18:59:50.580 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959560; id: 831; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040028_SRR22059161); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/5b/350e20c22532dd748032a34a411d82 started: 1731120590460; exited: 2024-11-09T02:59:46.131395358Z; ] Nov-08 18:59:50.626 [Task submitter] INFO nextflow.Session - [b0/7a4f61] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040028_SRR22059161) Nov-08 18:59:50.636 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 982; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040028_SRR22059161); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/b0/7a4f613dee974505df3d62182b605e] Nov-08 18:59:52.627 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040014_SRR22059178) > jobId: 21960039; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/db/bba57076b436844ec770604b9b90cb Nov-08 18:59:52.627 [Task submitter] INFO nextflow.Session - [db/bba570] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040014_SRR22059178) Nov-08 19:00:05.595 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959221; id: 764; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040019_SRR22059173); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/0a/4342c5c67f896a04d41a306d9303b7 started: 1731120515561; exited: 2024-11-09T03:00:04.265892206Z; ] Nov-08 19:00:05.666 [Task submitter] INFO nextflow.Session - [67/6ac54b] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040019_SRR22059173) Nov-08 19:00:05.673 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 983; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040019_SRR22059173); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/67/6ac54be04088d731271ecd5571d9e5] Nov-08 19:00:06.369 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656987_SRR10995882) > jobId: 21960046; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/4c/0bef5209c75491786747ae4fd866ea Nov-08 19:00:06.369 [Task submitter] INFO nextflow.Session - [4c/0bef52] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656987_SRR10995882) Nov-08 19:00:15.648 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959670; id: 757; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845525_SRR13430584); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/77/688edafc4ad20b7ac076b4ae59fb34 started: 1731121025574; exited: 2024-11-09T03:00:12.914937721Z; ] Nov-08 19:00:15.676 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959701; id: 675; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656975_SRR10995894); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/59/75c89c67ee8ac02df8f584ee0b3a40 started: 1731121160678; exited: 2024-11-09T03:00:11.139951744Z; ] Nov-08 19:00:15.717 [Task submitter] INFO nextflow.Session - [bb/2a76ed] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7656975_SRR10995894) Nov-08 19:00:15.722 [Task submitter] DEBUG n.processor.TaskPollingMonitor - %% executor local > tasks in the submission queue: 1 -- tasks to be submitted are shown below ~> TaskHandler[id: 985; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845525_SRR13430584); status: NEW; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/66/2abd0d22d05e620746ce6940683b86] Nov-08 19:00:15.724 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 984; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7656975_SRR10995894); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/bb/2a76ed23e02c824eafc6803562b933] Nov-08 19:00:16.416 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845530_SRR13430579) > jobId: 21960048; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/aa/dc37e8ca78f5799f2c2bca745a5743 Nov-08 19:00:16.416 [Task submitter] INFO nextflow.Session - [aa/dc37e8] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845530_SRR13430579) Nov-08 19:00:16.723 [Task submitter] INFO nextflow.Session - [66/2abd0d] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845525_SRR13430584) Nov-08 19:00:16.743 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 985; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845525_SRR13430584); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/66/2abd0d22d05e620746ce6940683b86] Nov-08 19:00:17.474 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845539_SRR13430570) > jobId: 21960049; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/17/c32351a9291c3b85f98df33a63a59a Nov-08 19:00:17.474 [Task submitter] INFO nextflow.Session - [17/c32351] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845539_SRR13430570) Nov-08 19:00:25.591 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959019; id: 769; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040035_SRR22059155); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/6f/8e32802bc0c69fb83334a4469581ba started: 1731120515470; exited: 2024-11-09T03:00:20.877785936Z; ] Nov-08 19:00:25.633 [Task submitter] INFO nextflow.Session - [e5/c9ada0] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040035_SRR22059155) Nov-08 19:00:25.638 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 986; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040035_SRR22059155); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/e5/c9ada07f51326c36d21110bb41c570] Nov-08 19:00:27.711 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845540_SRR13430569) > jobId: 21960055; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/b0/8f14806ab4b18954135de5b188f986 Nov-08 19:00:27.711 [Task submitter] INFO nextflow.Session - [b0/8f1480] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845540_SRR13430569) Nov-08 19:00:35.646 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959020; id: 770; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040038_SRR22059151); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/dc/812cec86a255666eb8b84f44f7942c started: 1731120520451; exited: 2024-11-09T03:00:33.945723942Z; ] Nov-08 19:00:35.721 [Task submitter] INFO nextflow.Session - [a9/5ff981] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040038_SRR22059151) Nov-08 19:00:35.725 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 987; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040038_SRR22059151); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/a9/5ff981bb69dad7dddda97b40c36bdb] Nov-08 19:00:36.426 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430582) > jobId: 21960062; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/fb/bcea766f578ef9bb871e1d502ab714 Nov-08 19:00:36.426 [Task submitter] INFO nextflow.Session - [fb/bcea76] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430582) Nov-08 19:00:40.625 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959673; id: 820; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644338_SRR8856651); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/51/bd4062ee8bc4a39f3290537b1a129b started: 1731121060582; exited: 2024-11-09T03:00:37.802263362Z; ] Nov-08 19:00:40.653 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959686; id: 809; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845510_SRR13430599); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ca/41a0164382f341074fd3ec92c638de started: 1731121096133; exited: 2024-11-09T03:00:35.87098664Z; ] Nov-08 19:00:40.688 [Task submitter] INFO nextflow.Session - [2e/2d0c35] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845510_SRR13430599) Nov-08 19:00:40.702 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 988; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845510_SRR13430599); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/2e/2d0c35b26c8bd086becbb0e77427d3] Nov-08 19:00:40.767 [Task submitter] INFO nextflow.Session - [87/694742] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX5644338_SRR8856651) Nov-08 19:00:40.792 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 989; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX5644338_SRR8856651); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/87/694742ee9f944a07fd92442ab873c7] Nov-08 19:00:41.474 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644308_SRR8856681) > jobId: 21960077; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/bf/55f2c0fe4e60b7c4d0fd70ff748652 Nov-08 19:00:41.474 [Task submitter] INFO nextflow.Session - [bf/55f2c0] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644308_SRR8856681) Nov-08 19:00:42.636 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845501_SRR13430608) > jobId: 21960078; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/76/729b82b55fbd2394fe2e2df616e0d6 Nov-08 19:00:42.636 [Task submitter] INFO nextflow.Session - [76/729b82] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845501_SRR13430608) Nov-08 19:00:55.652 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959951; id: 661; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR10993921); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/11/229b4e8794a6864b362fae3c061dfe started: 1731121125642; exited: 2024-11-09T03:00:52.696697978Z; ] Nov-08 19:00:56.462 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845515_SRR13430594) > jobId: 21960081; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/86/e07daa6507afdac39a917830fb2abf Nov-08 19:00:56.462 [Task submitter] INFO nextflow.Session - [86/e07daa] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845515_SRR13430594) Nov-08 19:01:00.668 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959702; id: 704; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656959_SRR10995910); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/12/7260c2843e2cd81d229a7184e93463 started: 1731121230647; exited: 2024-11-09T03:00:56.241139544Z; ] Nov-08 19:01:00.775 [Task submitter] INFO nextflow.Session - [1f/67f875] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7656959_SRR10995910) Nov-08 19:01:00.780 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 991; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7656959_SRR10995910); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/1f/67f8754ebdc4bd24f7e6434b75c565] Nov-08 19:01:01.837 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655175_SRR10993905) > jobId: 21960085; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/68/fe796cf1effa21667a34895c8ea455 Nov-08 19:01:01.837 [Task submitter] INFO nextflow.Session - [68/fe796c] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655175_SRR10993905) Nov-08 19:01:05.626 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959674; id: 847; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845514_SRR13430595); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d2/8898d72bcf94514b8e06e4456f1840 started: 1731121060587; exited: 2024-11-09T03:01:05.253871129Z; ] Nov-08 19:01:05.642 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959676; id: 869; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845533_SRR13430576); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/56/1b32d4470da82ff3f62b0842b6a2ef started: 1731121060596; exited: 2024-11-09T03:01:02.857675749Z; ] Nov-08 19:01:05.695 [Task submitter] INFO nextflow.Session - [eb/d74fee] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845533_SRR13430576) Nov-08 19:01:05.698 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 992; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845533_SRR13430576); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/eb/d74fee00d1796d9d475ee9fb720793] Nov-08 19:01:05.698 [Task submitter] INFO nextflow.Session - [d7/b64214] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845514_SRR13430595) Nov-08 19:01:05.703 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 993; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845514_SRR13430595); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d7/b642145c978f67ebddf24966abb3b9] Nov-08 19:01:06.926 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845543_SRR13430566) > jobId: 21960091; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/81/e5dbbaa18679e19f7682a7c51d240f Nov-08 19:01:06.930 [Task submitter] INFO nextflow.Session - [81/e5dbba] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845543_SRR13430566) Nov-08 19:01:07.771 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040061_SRR22059130) > jobId: 21960092; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/5f/bfe36165d305d46a500ce2f2c2dbd3 Nov-08 19:01:07.771 [Task submitter] INFO nextflow.Session - [5f/bfe361] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040061_SRR22059130) Nov-08 19:01:15.974 [Task submitter] DEBUG n.processor.TaskPollingMonitor - %% executor slurm > tasks in the submission queue: 7 -- tasks to be submitted are shown below ~> TaskHandler[jobId: null; id: 758; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644335_SRR8856654); status: NEW; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/9f/5bc1bea605efcf256399aaf2832fde started: -; exited: -; ] ~> TaskHandler[jobId: null; id: 897; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845534_SRR13430575); status: NEW; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/9c/4af5c6bdc0c71b003ef3284ee53835 started: -; exited: -; ] ~> TaskHandler[jobId: null; id: 918; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845524_SRR13430585); status: NEW; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/40/e73dc087efc8c88b620743d4a3ca73 started: -; exited: -; ] ~> TaskHandler[jobId: null; id: 936; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040050_SRR22059166); status: NEW; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/5c/8c3312bf6b309506d8a51de2529482 started: -; exited: -; ] ~> TaskHandler[jobId: null; id: 961; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040029_SRR22059160); status: NEW; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/2f/b309592ec0f23a70d3d67b06dac856 started: -; exited: -; ] ~> TaskHandler[jobId: null; id: 979; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040027_SRR22059163); status: NEW; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/e9/fe50b017bead025f0ac3b82bde272f started: -; exited: -; ] ~> TaskHandler[jobId: null; id: 990; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655159_SRR10993921); status: NEW; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d2/41e3678d9f2fa7863ab6cabb2a733e started: -; exited: -; ] Nov-08 19:01:25.635 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959584; id: 807; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655165_SRR10993915); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/8c/590d6a38623c4835bdb2be4f5aa0d0 started: 1731120840598; exited: 2024-11-09T03:01:23.727801848Z; ] Nov-08 19:01:25.672 [Task submitter] INFO nextflow.Session - [44/b30803] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7655165_SRR10993915) Nov-08 19:01:25.676 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 994; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7655165_SRR10993915); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/44/b30803179020ece32bda349489228e] Nov-08 19:01:26.199 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845524_SRR13430585) > jobId: 21960103; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/40/e73dc087efc8c88b620743d4a3ca73 Nov-08 19:01:26.199 [Task submitter] INFO nextflow.Session - [40/e73dc0] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845524_SRR13430585) Nov-08 19:01:30.680 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959572; id: 752; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040022_SRR22059170); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/71/30b90996ef756e1ddf80c7b3d2f697 started: 1731120660486; exited: 2024-11-09T03:01:26.707130936Z; ] Nov-08 19:01:30.901 [Task submitter] INFO nextflow.Session - [7d/1c7d9e] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040022_SRR22059170) Nov-08 19:01:30.923 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 995; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040022_SRR22059170); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/7d/1c7d9e44435f2aa495ffb4f00dc6cf] Nov-08 19:01:31.424 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644335_SRR8856654) > jobId: 21960106; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/9f/5bc1bea605efcf256399aaf2832fde Nov-08 19:01:31.424 [Task submitter] INFO nextflow.Session - [9f/5bc1be] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644335_SRR8856654) Nov-08 19:01:35.661 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959693; id: 854; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845520_SRR13430589); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/6b/4a285b5502f1fe71c0ab409975a5bc started: 1731121125594; exited: 2024-11-09T03:01:31.370607409Z; ] Nov-08 19:01:35.692 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959703; id: 709; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655188_SRR10993892); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/f7/d34e7360c3ad2651aa6c35e11b157e started: 1731121235676; exited: 2024-11-09T03:01:30.955706551Z; ] Nov-08 19:01:35.821 [Task submitter] INFO nextflow.Session - [bc/737e2b] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7655188_SRR10993892) Nov-08 19:01:35.887 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 996; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7655188_SRR10993892); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/bc/737e2bcd1347a4b8ee37144380c8b5] Nov-08 19:01:35.915 [Task submitter] INFO nextflow.Session - [13/b364f9] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845520_SRR13430589) Nov-08 19:01:35.947 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 997; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845520_SRR13430589); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/13/b364f96c74a09e4b36a1a284554250] Nov-08 19:01:36.480 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655159_SRR10993921) > jobId: 21960110; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d2/41e3678d9f2fa7863ab6cabb2a733e Nov-08 19:01:36.480 [Task submitter] INFO nextflow.Session - [d2/41e367] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655159_SRR10993921) Nov-08 19:01:37.483 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845534_SRR13430575) > jobId: 21960111; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/9c/4af5c6bdc0c71b003ef3284ee53835 Nov-08 19:01:37.483 [Task submitter] INFO nextflow.Session - [9c/4af5c6] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845534_SRR13430575) Nov-08 19:01:40.639 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959022; id: 772; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040008_SRR22059184); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/77/654656d1c4388394a97cfc0dcdcff8 started: 1731120515491; exited: 2024-11-09T03:01:39.30056483Z; ] Nov-08 19:01:40.684 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959712; id: 784; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655167_SRR10993913); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/16/e0abf95671e50627e9e3f940550d41 started: 1731121230688; exited: 2024-11-09T03:01:39.447129978Z; ] Nov-08 19:01:40.729 [Task submitter] INFO nextflow.Session - [30/9591ef] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040008_SRR22059184) Nov-08 19:01:40.734 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 998; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040008_SRR22059184); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/30/9591efd2e817f01c09d6208115f274] Nov-08 19:01:41.730 [Task submitter] INFO nextflow.Session - [60/cca76f] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7655167_SRR10993913) Nov-08 19:01:41.734 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 999; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7655167_SRR10993913); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/60/cca76fc0fd3640f167d9015293bd51] Nov-08 19:01:42.519 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040050_SRR22059166) > jobId: 21960112; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/5c/8c3312bf6b309506d8a51de2529482 Nov-08 19:01:42.519 [Task submitter] INFO nextflow.Session - [5c/8c3312] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040050_SRR22059166) Nov-08 19:01:44.409 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040029_SRR22059160) > jobId: 21960113; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/2f/b309592ec0f23a70d3d67b06dac856 Nov-08 19:01:44.409 [Task submitter] INFO nextflow.Session - [2f/b30959] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040029_SRR22059160) Nov-08 19:01:45.673 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959692; id: 846; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845528_SRR13430581); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/8d/e6dd8164a31cffbc83bd955e8b6f93 started: 1731121125584; exited: 2024-11-09T03:01:44.624167825Z; ] Nov-08 19:01:46.045 [Task submitter] INFO nextflow.Session - [73/e04fbb] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845528_SRR13430581) Nov-08 19:01:46.099 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1000; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845528_SRR13430581); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/73/e04fbb3fa30238bdd549187dd8a0b4] Nov-08 19:01:47.110 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040027_SRR22059163) > jobId: 21960114; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/e9/fe50b017bead025f0ac3b82bde272f Nov-08 19:01:47.110 [Task submitter] INFO nextflow.Session - [e9/fe50b0] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040027_SRR22059163) Nov-08 19:02:00.690 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959586; id: 819; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655160_SRR10993920); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/52/3557f4b61e494aa926e39d3152e1e6 started: 1731120910557; exited: 2024-11-09T03:01:57.228754288Z; ] Nov-08 19:02:00.916 [Task submitter] INFO nextflow.Session - [ef/524ef5] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7655160_SRR10993920) Nov-08 19:02:00.920 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1001; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7655160_SRR10993920); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ef/524ef5354382dbae2d9fd806705383] Nov-08 19:02:15.708 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959578; id: 791; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040045_SRR22059144); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/e4/00db418003ad195042d476f9abaf3c started: 1731120705496; exited: 2024-11-09T03:02:13.475177973Z; ] Nov-08 19:02:15.789 [Task submitter] INFO nextflow.Session - [e8/921829] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040045_SRR22059144) Nov-08 19:02:15.794 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1002; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040045_SRR22059144); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/e8/9218293e2ce5c742e7223793e4dd5b] Nov-08 19:03:05.709 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959025; id: 785; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040037_SRR22059152); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/02/f2890358631a48a0eb96dea5cbcfdb started: 1731120510481; exited: 2024-11-09T03:03:04.759018787Z; ] Nov-08 19:03:05.770 [Task submitter] INFO nextflow.Session - [3d/74dbcd] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040037_SRR22059152) Nov-08 19:03:05.773 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1003; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040037_SRR22059152); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/3d/74dbcd0a91403e0086b11dcdd2c64c] Nov-08 19:03:15.719 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959554; id: 781; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040013_SRR22059179); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/26/44802217ad688c60910351ddfc5c78 started: 1731120510572; exited: 2024-11-09T03:03:11.949310653Z; ] Nov-08 19:03:15.803 [Task submitter] INFO nextflow.Session - [3b/140019] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040013_SRR22059179) Nov-08 19:03:15.828 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1004; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040013_SRR22059179); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/3b/14001958cabe571480303d9b28350e] Nov-08 19:03:21.027 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959696; id: 874; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655155_SRR10993925); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/72/1fc1dfe9a17546252b6144a138a12d started: 1731121125599; exited: 2024-11-09T03:03:19.889180774Z; ] Nov-08 19:03:21.053 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959733; id: 883; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655170_SRR10993910); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/18/383fdc28dd42f757bbb6274e5ee6ec started: 1731121270746; exited: 2024-11-09T03:03:19.544837532Z; ] Nov-08 19:03:21.136 [Task submitter] INFO nextflow.Session - [8c/e2c4a3] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7655170_SRR10993910) Nov-08 19:03:21.156 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1005; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7655170_SRR10993910); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/8c/e2c4a3f101553eaa09bc9c1960d96d] Nov-08 19:03:21.215 [Task submitter] INFO nextflow.Session - [cf/5870bf] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7655155_SRR10993925) Nov-08 19:03:21.234 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1006; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7655155_SRR10993925); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/cf/5870bf78755e6334f8aa044a96c001] Nov-08 19:03:21.495 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > No more task to compute -- The following nodes are still active: [process] NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP status=ACTIVE port 0: (queue) OPEN ; channel: - port 1: (value) bound ; channel: ncbi_settings port 2: (value) bound ; channel: certificate port 3: (cntrl) - ; channel: $ [process] NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET status=ACTIVE port 0: (queue) OPEN ; channel: meta port 1: (value) bound ; channel: pipeline port 2: (value) bound ; channel: strandedness port 3: (value) bound ; channel: mapping_fields port 4: (cntrl) - ; channel: $ [process] NFCORE_FETCHNGS:SRA:MULTIQC_MAPPINGS_CONFIG status=ACTIVE port 0: (queue) OPEN ; channel: csv port 1: (cntrl) - ; channel: $ Nov-08 19:03:25.698 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor slurm > tasks to be completed: 94 -- submitted tasks are shown below ~> TaskHandler[jobId: 21959023; id: 779; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040024_SRR22059168); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/33/4091184d771a2485dc33c543914ec5 started: 1731120510469; exited: -; ] ~> TaskHandler[jobId: 21959024; id: 780; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040015_SRR22059177); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/e2/40156bd8814afdf0d3606e7145203f started: 1731120510474; exited: -; ] ~> TaskHandler[jobId: 21959266; id: 793; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040046_SRR22059143); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/e9/4bf0ad646fac0d81f24c7e4d7897cd started: 1731120510545; exited: -; ] ~> TaskHandler[jobId: 21959441; id: 760; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040036_SRR22059153); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/24/5bc444c3d8cdf01bd00d5e01559fcd started: 1731120515598; exited: -; ] ~> TaskHandler[jobId: 21959456; id: 790; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040007_SRR22059185); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/fa/6c3f3bffdf1308570742dfe540f422 started: 1731120520469; exited: -; ] ~> TaskHandler[jobId: 21959553; id: 773; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040048_SRR22059142); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/c6/3e6a63c88415865ca140e4ee706d50 started: 1731120510567; exited: -; ] ~> TaskHandler[jobId: 21959576; id: 775; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040017_SRR22059175); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/0e/6f6faa28d53de7ed2349d8b06143b6 started: 1731120665499; exited: -; ] ~> TaskHandler[jobId: 21959579; id: 792; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040049_SRR22059141); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/11/57e54342b1e6648a0dd1bbb4e1cf49 started: 1731120731218; exited: -; ] ~> TaskHandler[jobId: 21959588; id: 860; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040025_SRR22059165); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/89/2630063e52a0cfa31c8120a329013b started: 1731120910570; exited: -; ] ~> TaskHandler[jobId: 21959599; id: 802; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040010_SRR22059182); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/a4/12d4a94572d50b2458b1f36bfc2684 started: 1731120910672; exited: -; ] .. remaining tasks omitted. Nov-08 19:03:45.742 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959441; id: 760; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040036_SRR22059153); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/24/5bc444c3d8cdf01bd00d5e01559fcd started: 1731120515598; exited: 2024-11-09T03:03:43.201392376Z; ] Nov-08 19:03:45.858 [Task submitter] INFO nextflow.Session - [96/f210a0] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040036_SRR22059153) Nov-08 19:03:45.902 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1007; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040036_SRR22059153); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/96/f210a0fdc54c5ddb706b9bfcdf6d0d] Nov-08 19:03:50.724 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959761; id: 803; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655154_SRR10993926); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/bd/1ad7aa2e0ccfc12c6173812c036fb0 started: 1731121341077; exited: 2024-11-09T03:03:46.939322196Z; ] Nov-08 19:03:50.788 [Task submitter] INFO nextflow.Session - [fa/911611] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7655154_SRR10993926) Nov-08 19:03:50.792 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1008; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7655154_SRR10993926); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/fa/9116113b9a6dd2ccab69e01b75ac6b] Nov-08 19:04:05.772 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959844; id: 550; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059133); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/f5/edcc3b3acf92c2afc17429b1e69821 started: 1731120985586; exited: 2024-11-09T03:04:03.30947252Z; ] Nov-08 19:04:07.166 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040057_SRR22059133) > jobId: 21960195; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/e4/72a4ff3ba0ae86ff26b3cdac145deb Nov-08 19:04:07.166 [Task submitter] INFO nextflow.Session - [e4/72a4ff] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040057_SRR22059133) Nov-08 19:04:15.740 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959709; id: 750; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644316_SRR8856673); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/cc/826fadd7daf4e009c5363dba328f8a started: 1731121230672; exited: 2024-11-09T03:04:14.135865096Z; ] Nov-08 19:04:15.808 [Task submitter] INFO nextflow.Session - [94/3366ce] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX5644316_SRR8856673) Nov-08 19:04:15.842 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1010; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX5644316_SRR8856673); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/94/3366ce4d1b2f5fcba90f58a5b25fe8] Nov-08 19:04:40.753 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959722; id: 866; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845519_SRR13430590); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/be/b10bede5081364738fc0e1b8a1e28b started: 1731121275638; exited: 2024-11-09T03:04:37.517970666Z; ] Nov-08 19:04:40.764 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959772; id: 884; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655172_SRR10993908); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/1a/5477aadab1d527ff2c07c6b7088017 started: 1731121455745; exited: 2024-11-09T03:04:38.260784347Z; ] Nov-08 19:04:40.780 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959803; id: 677; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656976_SRR10995893); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/64/d8f8269dcf303258535a5d98bbcf0b started: 1731121455767; exited: 2024-11-09T03:04:39.656285694Z; ] Nov-08 19:04:40.792 [Task submitter] INFO nextflow.Session - [c1/d341b3] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845519_SRR13430590) Nov-08 19:04:40.794 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1011; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845519_SRR13430590); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/c1/d341b37ad883c4769b254afac5450e] Nov-08 19:04:40.859 [Task submitter] INFO nextflow.Session - [42/c786de] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7655172_SRR10993908) Nov-08 19:04:40.862 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1013; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7655172_SRR10993908); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/42/c786de2e5e703b64fc4dcd9e02a6c4] Nov-08 19:04:41.792 [Task submitter] INFO nextflow.Session - [4f/36bcb6] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7656976_SRR10995893) Nov-08 19:04:41.794 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1012; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7656976_SRR10995893); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/4f/36bcb6e78a879daa42a93c5b595c57] Nov-08 19:04:45.749 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959758; id: 747; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845518_SRR13430591); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/5f/ff417939ca1b81f0f6520e4c253108 started: 1731121305711; exited: 2024-11-09T03:04:42.347235267Z; ] Nov-08 19:04:45.779 [Task submitter] INFO nextflow.Session - [cf/67a1ef] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845518_SRR13430591) Nov-08 19:04:45.781 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1014; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845518_SRR13430591); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/cf/67a1ef82a6e8b76ee152e41067f624] Nov-08 19:04:55.743 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959718; id: 850; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845516_SRR13430593); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/62/5785f54c7194587fb62ed14be715c2 started: 1731121275632; exited: 2024-11-09T03:04:50.806156762Z; ] Nov-08 19:04:55.748 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959829; id: 841; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656995_SRR10995874); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/5c/2a0a13171e0885bb2d946c0a178a29 started: 1731121455879; exited: 2024-11-09T03:04:55.546835524Z; ] Nov-08 19:04:55.778 [Task submitter] INFO nextflow.Session - [cf/bf175a] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845516_SRR13430593) Nov-08 19:04:55.780 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1015; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845516_SRR13430593); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/cf/bf175a771af3c7ca757fc52c4a6cda] Nov-08 19:04:55.794 [Task submitter] INFO nextflow.Session - [75/3556da] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7656995_SRR10995874) Nov-08 19:04:55.797 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1016; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7656995_SRR10995874); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/75/3556da0c754ee1cf518eb100f34dbb] Nov-08 19:05:05.752 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21960085; id: 765; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655175_SRR10993905); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/68/fe796cf1effa21667a34895c8ea455 started: 1731121490905; exited: 2024-11-09T03:05:00.789187996Z; ] Nov-08 19:05:05.785 [Task submitter] INFO nextflow.Session - [af/4f8553] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7655175_SRR10993905) Nov-08 19:05:05.787 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1017; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7655175_SRR10993905); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/af/4f8553539a781b52f241872d60a253] Nov-08 19:05:10.752 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959828; id: 703; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656966_SRR10995903); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/f4/6edf1e3b8878ddb0dc2926b157f149 started: 1731121455810; exited: 2024-11-09T03:05:08.072068931Z; ] Nov-08 19:05:11.208 [Task submitter] INFO nextflow.Session - [df/c654e3] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7656966_SRR10995903) Nov-08 19:05:11.211 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1018; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7656966_SRR10995903); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/df/c654e31c97f9ebd047e09758a38a0c] Nov-08 19:05:21.785 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959981; id: 697; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656984_SRR10995885); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/86/7823ee7fa77d55a1d28d3a0b3bdff6 started: 1731121495959; exited: 2024-11-09T03:05:16.633893365Z; ] Nov-08 19:05:21.827 [Task submitter] INFO nextflow.Session - [db/96e994] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7656984_SRR10995885) Nov-08 19:05:21.829 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1019; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7656984_SRR10995885); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/db/96e9949f72a499e6a0cad34e211fec] Nov-08 19:05:30.746 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959730; id: 879; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655179_SRR10993901); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/7d/7a2f45f96d5443849294ac6aca75cb started: 1731121270700; exited: 2024-11-09T03:05:25.849695263Z; ] Nov-08 19:05:30.781 [Task submitter] INFO nextflow.Session - [c5/2f005e] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7655179_SRR10993901) Nov-08 19:05:30.783 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1020; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7655179_SRR10993901); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/c5/2f005e7cf8098a052cea2f61eb281f] Nov-08 19:05:35.784 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959980; id: 696; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656990_SRR10995879); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/bc/0f519a4d1c99c6ce0ebd57878ee70b started: 1731121490852; exited: 2024-11-09T03:05:33.025966668Z; ] Nov-08 19:05:36.294 [Task submitter] INFO nextflow.Session - [13/e41138] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7656990_SRR10995879) Nov-08 19:05:36.306 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1021; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7656990_SRR10995879); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/13/e4113884e2778c701945d4c2c3e56a] Nov-08 19:05:40.748 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959456; id: 790; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040007_SRR22059185); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/fa/6c3f3bffdf1308570742dfe540f422 started: 1731120520469; exited: 2024-11-09T03:05:36.088755723Z; ] Nov-08 19:05:40.804 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959769; id: 864; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845506_SRR13430603); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/b3/d2fe1004330a2a1bd1cc039c5fe3a7 started: 1731121410795; exited: 2024-11-09T03:05:38.774342635Z; ] Nov-08 19:05:40.990 [Task submitter] INFO nextflow.Session - [84/2dc5eb] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040007_SRR22059185) Nov-08 19:05:41.008 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1022; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040007_SRR22059185); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/84/2dc5eb623c33267b15d4a334bf8ab5] Nov-08 19:05:41.651 [Task submitter] INFO nextflow.Session - [c5/c11498] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845506_SRR13430603) Nov-08 19:05:41.688 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1023; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845506_SRR13430603); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/c5/c11498d78927ce55c82ea9f212b99d] Nov-08 19:05:55.796 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959768; id: 858; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644305_SRR8856684); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/24/4464e79498c8eb848a8ea6bb722a61 started: 1731121410778; exited: 2024-11-09T03:05:51.975526829Z; ] Nov-08 19:05:55.821 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959892; id: 929; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655153_SRR10993927); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/bb/06714076c20ea45438594563b9fe2e started: 1731121490770; exited: 2024-11-09T03:05:52.243821334Z; ] Nov-08 19:05:56.675 [Task submitter] INFO nextflow.Session - [62/488105] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7655153_SRR10993927) Nov-08 19:05:56.689 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1024; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7655153_SRR10993927); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/62/48810512f08b5624c47b1b2bd83fda] Nov-08 19:05:58.305 [Task submitter] INFO nextflow.Session - [20/21d8ba] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX5644305_SRR8856684) Nov-08 19:05:58.328 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1025; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX5644305_SRR8856684); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/20/21d8ba880a3a4d0c5a5df3d1aa7f80] Nov-08 19:06:00.759 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21960046; id: 669; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7656987_SRR10995882); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/4c/0bef5209c75491786747ae4fd866ea started: 1731121496130; exited: 2024-11-09T03:05:59.733386444Z; ] Nov-08 19:06:00.853 [Task submitter] INFO nextflow.Session - [ab/d598df] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7656987_SRR10995882) Nov-08 19:06:00.881 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1026; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7656987_SRR10995882); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ab/d598df33251ffd1dcc8a956f4c294c] Nov-08 19:06:20.840 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959576; id: 775; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040017_SRR22059175); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/0e/6f6faa28d53de7ed2349d8b06143b6 started: 1731120665499; exited: 2024-11-09T03:06:16.855047357Z; ] Nov-08 19:06:21.408 [Task submitter] INFO nextflow.Session - [12/a32808] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040017_SRR22059175) Nov-08 19:06:21.410 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1027; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040017_SRR22059175); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/12/a328085dd3f2dbd950667a2b7361c6] Nov-08 19:06:30.803 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959764; id: 828; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845503_SRR13430606); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/65/a1ae70507f7f7747f9b006f786f34f started: 1731121415749; exited: 2024-11-09T03:06:28.59053333Z; ] Nov-08 19:06:30.971 [Task submitter] INFO nextflow.Session - [ce/5ecd25] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845503_SRR13430606) Nov-08 19:06:30.992 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1028; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845503_SRR13430606); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ce/5ecd25a1fc3b164b0f32da787bf955] Nov-08 19:06:35.784 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21960026; id: 592; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR8856656); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/a2/c26f7611c781332ddf2bf765ff80f9 started: 1731121341100; exited: 2024-11-09T03:06:34.54536687Z; ] Nov-08 19:06:36.188 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644333_SRR8856656) > jobId: 21960241; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/f0/f1ec31d7245eb94b5d23e479b6dd5b Nov-08 19:06:36.188 [Task submitter] INFO nextflow.Session - [f0/f1ec31] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644333_SRR8856656) Nov-08 19:06:40.843 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959994; id: 794; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655151_SRR10993929); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/5c/d1db4df34f17316992ed50ada6b3b9 started: 1731121496044; exited: 2024-11-09T03:06:40.482942613Z; ] Nov-08 19:06:40.873 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21960062; id: 627; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR13430582); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/fb/bcea766f578ef9bb871e1d502ab714 started: 1731121455903; exited: 2024-11-09T03:06:37.448926332Z; ] Nov-08 19:06:41.100 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845527_SRR13430582) > jobId: 21960243; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/c4/3babf377e8db796b3cc5bb7547cee3 Nov-08 19:06:41.100 [Task submitter] INFO nextflow.Session - [c4/3babf3] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845527_SRR13430582) Nov-08 19:06:41.522 [Task submitter] INFO nextflow.Session - [41/afc29c] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7655151_SRR10993929) Nov-08 19:06:41.529 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1031; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7655151_SRR10993929); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/41/afc29c322475d618367ce7d4e3f0f9] Nov-08 19:06:50.799 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959024; id: 780; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040015_SRR22059177); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/e2/40156bd8814afdf0d3606e7145203f started: 1731120510474; exited: 2024-11-09T03:06:49.092343026Z; ] Nov-08 19:06:50.828 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959553; id: 773; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040048_SRR22059142); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/c6/3e6a63c88415865ca140e4ee706d50 started: 1731120510567; exited: 2024-11-09T03:06:47.212205818Z; ] Nov-08 19:06:50.844 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959765; id: 829; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644332_SRR8856657); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/25/74fa472571ff1636417925e44920a0 started: 1731121415766; exited: 2024-11-09T03:06:46.241273971Z; ] Nov-08 19:06:51.806 [Task submitter] INFO nextflow.Session - [7d/38cb06] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040015_SRR22059177) Nov-08 19:06:51.858 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1032; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040015_SRR22059177); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/7d/38cb06e2506c673f579429d75f8991] Nov-08 19:06:52.046 [Task submitter] INFO nextflow.Session - [dd/2e169e] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040048_SRR22059142) Nov-08 19:06:52.048 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1033; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040048_SRR22059142); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/dd/2e169e12b39d6b2baa47915c1c1d58] Nov-08 19:06:52.813 [Task submitter] INFO nextflow.Session - [a1/62c4db] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX5644332_SRR8856657) Nov-08 19:06:52.826 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1034; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX5644332_SRR8856657); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/a1/62c4dbff203a691cadb7ea9c7d1781] Nov-08 19:07:00.807 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959767; id: 856; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845526_SRR13430583); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/7e/03290aba98ecca0f0108671bd56320 started: 1731121410756; exited: 2024-11-09T03:06:59.087601509Z; ] Nov-08 19:07:01.080 [Task submitter] INFO nextflow.Session - [4f/5f4b16] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845526_SRR13430583) Nov-08 19:07:01.089 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1035; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845526_SRR13430583); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/4f/5f4b1660d0c80c44adfbae6cfe52dc] Nov-08 19:07:15.848 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959771; id: 867; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845531_SRR13430578); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/60/5716b40f8d89c441a20a0c28a28247 started: 1731121410822; exited: 2024-11-09T03:07:12.646072822Z; ] Nov-08 19:07:16.267 [Task submitter] INFO nextflow.Session - [c5/9afb14] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845531_SRR13430578) Nov-08 19:07:16.277 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1036; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845531_SRR13430578); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/c5/9afb14736c40bc0f26785948ba4b80] Nov-08 19:07:35.864 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959903; id: 562; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059158); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/78/80f5f8efadfb0ecffab4e0a4b72152 started: 1731121125635; exited: 2024-11-09T03:07:33.735860809Z; ] Nov-08 19:07:35.891 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959958; id: 852; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845509_SRR13430600); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d9/82d3e1fcd2d207ab282fcdb8978710 started: 1731121495859; exited: 2024-11-09T03:07:35.518013987Z; ] Nov-08 19:07:36.211 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040032_SRR22059158) > jobId: 21960246; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/52/aef75d58cee0416a7e37c0cf8a23cd Nov-08 19:07:36.211 [Task submitter] INFO nextflow.Session - [52/aef75d] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040032_SRR22059158) Nov-08 19:07:36.318 [Task submitter] INFO nextflow.Session - [ac/21165d] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845509_SRR13430600) Nov-08 19:07:36.331 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1038; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845509_SRR13430600); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ac/21165d4c4f69ad36cb969092db22a1] Nov-08 19:07:55.846 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959266; id: 793; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040046_SRR22059143); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/e9/4bf0ad646fac0d81f24c7e4d7897cd started: 1731120510545; exited: 2024-11-09T03:07:54.244680868Z; ] Nov-08 19:07:55.858 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959832; id: 857; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644307_SRR8856682); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/44/06ed153f9a8d06363a3ddbe81737c7 started: 1731121490744; exited: 2024-11-09T03:07:51.444548501Z; ] Nov-08 19:07:55.871 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21960055; id: 902; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845540_SRR13430569); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/b0/8f14806ab4b18954135de5b188f986 started: 1731121496225; exited: 2024-11-09T03:07:53.440452926Z; ] Nov-08 19:07:55.881 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21960078; id: 923; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845501_SRR13430608); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/76/729b82b55fbd2394fe2e2df616e0d6 started: 1731121496244; exited: 2024-11-09T03:07:52.160939255Z; ] Nov-08 19:07:55.896 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21960091; id: 968; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845543_SRR13430566); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/81/e5dbbaa18679e19f7682a7c51d240f started: 1731121496250; exited: 2024-11-09T03:07:53.005490736Z; ] Nov-08 19:07:55.908 [Task submitter] INFO nextflow.Session - [67/795b03] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX5644307_SRR8856682) Nov-08 19:07:55.914 [Task submitter] DEBUG n.processor.TaskPollingMonitor - %% executor local > tasks in the submission queue: 1 -- tasks to be submitted are shown below ~> TaskHandler[id: 1040; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845501_SRR13430608); status: NEW; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/71/1fda0609535c23b8372bf28a98814e] Nov-08 19:07:55.915 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1039; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX5644307_SRR8856682); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/67/795b03f71b319f944b446d44b13493] Nov-08 19:07:56.909 [Task submitter] INFO nextflow.Session - [71/1fda06] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845501_SRR13430608) Nov-08 19:07:56.951 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1040; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845501_SRR13430608); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/71/1fda0609535c23b8372bf28a98814e] Nov-08 19:07:57.912 [Task submitter] INFO nextflow.Session - [0d/ea6c4e] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845543_SRR13430566) Nov-08 19:07:57.932 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1041; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845543_SRR13430566); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/0d/ea6c4eb516a9c54e0f0cf05d45e560] Nov-08 19:07:58.914 [Task submitter] INFO nextflow.Session - [2c/2e1602] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040046_SRR22059143) Nov-08 19:07:59.083 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1042; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040046_SRR22059143); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/2c/2e16026d4f19eac93d0b23d232a829] Nov-08 19:07:59.909 [Task submitter] INFO nextflow.Session - [ee/96884d] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845540_SRR13430569) Nov-08 19:07:59.912 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1043; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845540_SRR13430569); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ee/96884d90b0e8653996a247ca0429e0] Nov-08 19:08:15.890 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21960049; id: 964; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845539_SRR13430570); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/17/c32351a9291c3b85f98df33a63a59a started: 1731121496193; exited: 2024-11-09T03:08:13.386957531Z; ] Nov-08 19:08:16.265 [Task submitter] INFO nextflow.Session - [66/81d65d] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845539_SRR13430570) Nov-08 19:08:16.299 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1044; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845539_SRR13430570); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/66/81d65de9f82f46ffbecdb0b256440d] Nov-08 19:08:21.256 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959579; id: 792; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040049_SRR22059141); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/11/57e54342b1e6648a0dd1bbb4e1cf49 started: 1731120731218; exited: 2024-11-09T03:08:17.541026536Z; ] Nov-08 19:08:21.278 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21960025; id: 970; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655166_SRR10993914); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ad/5a058c1981e311ec52fa29c53954b8 started: 1731121490883; exited: 2024-11-09T03:08:16.375541332Z; ] Nov-08 19:08:21.362 [Task submitter] INFO nextflow.Session - [d4/fa7d56] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7655166_SRR10993914) Nov-08 19:08:21.383 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1045; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7655166_SRR10993914); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d4/fa7d56596bf6367ba206647b437209] Nov-08 19:08:21.514 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > No more task to compute -- The following nodes are still active: [process] NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP status=ACTIVE port 0: (queue) OPEN ; channel: - port 1: (value) bound ; channel: ncbi_settings port 2: (value) bound ; channel: certificate port 3: (cntrl) - ; channel: $ [process] NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET status=ACTIVE port 0: (queue) OPEN ; channel: meta port 1: (value) bound ; channel: pipeline port 2: (value) bound ; channel: strandedness port 3: (value) bound ; channel: mapping_fields port 4: (cntrl) - ; channel: $ [process] NFCORE_FETCHNGS:SRA:MULTIQC_MAPPINGS_CONFIG status=ACTIVE port 0: (queue) OPEN ; channel: csv port 1: (cntrl) - ; channel: $ Nov-08 19:08:21.834 [Task submitter] INFO nextflow.Session - [7e/844689] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040049_SRR22059141) Nov-08 19:08:21.868 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1046; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040049_SRR22059141); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/7e/8446899ad75034fd158e470ccc880e] Nov-08 19:08:25.844 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor slurm > tasks to be completed: 58 -- submitted tasks are shown below ~> TaskHandler[jobId: 21959023; id: 779; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040024_SRR22059168); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/33/4091184d771a2485dc33c543914ec5 started: 1731120510469; exited: -; ] ~> TaskHandler[jobId: 21959588; id: 860; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040025_SRR22059165); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/89/2630063e52a0cfa31c8120a329013b started: 1731120910570; exited: -; ] ~> TaskHandler[jobId: 21959599; id: 802; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040010_SRR22059182); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/a4/12d4a94572d50b2458b1f36bfc2684 started: 1731120910672; exited: -; ] ~> TaskHandler[jobId: 21959664; id: 789; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040041_SRR22059149); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d4/e586cfb3515aa28d1ac175c503aa19 started: 1731120950567; exited: -; ] ~> TaskHandler[jobId: 21959672; id: 800; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040009_SRR22059183); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/51/84a5aa9138e907667b47d9b51dde7c started: 1731121060574; exited: -; ] ~> TaskHandler[jobId: 21959713; id: 815; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040023_SRR22059169); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/0a/ed074bea4b07fd5fd38c2bd6ee9949 started: 1731121230705; exited: -; ] ~> TaskHandler[jobId: 21959716; id: 836; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040034_SRR22059156); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/68/1724c38728575631712bc956a21e29 started: 1731121235692; exited: -; ] ~> TaskHandler[jobId: 21959717; id: 839; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040030_SRR22059159); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/30/3ed82ce80d3aa3d1ced2483f4715d9 started: 1731121270663; exited: -; ] ~> TaskHandler[jobId: 21959732; id: 882; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040047_SRR22059146); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/29/4ad22fe4d5d726444c379a96411663 started: 1731121270708; exited: -; ] ~> TaskHandler[jobId: 21959759; id: 749; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040004_SRR22059187); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/6b/5956da4845ae2df3a81c1b67245756 started: 1731121305729; exited: -; ] .. remaining tasks omitted. Nov-08 19:08:25.877 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959954; id: 830; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644334_SRR8856655); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/3e/ac4839f0448c49971673d2ecba9382 started: 1731121490813; exited: 2024-11-09T03:08:24.173582595Z; ] Nov-08 19:08:26.247 [Task submitter] INFO nextflow.Session - [41/9fded3] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX5644334_SRR8856655) Nov-08 19:08:26.268 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1047; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX5644334_SRR8856655); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/41/9fded3c29c4d191972d0b2a6dd9d0e] Nov-08 19:08:30.895 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959993; id: 949; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655164_SRR10993916); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/a6/6c2b4859a636a848310360235a874f started: 1731121496023; exited: 2024-11-09T03:08:30.621460553Z; ] Nov-08 19:08:30.958 [Task submitter] INFO nextflow.Session - [49/933078] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7655164_SRR10993916) Nov-08 19:08:30.973 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1048; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7655164_SRR10993916); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/49/93307844001b8cab13b7c44c91da8f] Nov-08 19:08:35.898 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959861; id: 842; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845521_SRR13430588); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/38/7799b50be29285c14f8220539d5deb started: 1731121495752; exited: 2024-11-09T03:08:32.029105345Z; ] Nov-08 19:08:35.988 [Task submitter] INFO nextflow.Session - [aa/5f0d94] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845521_SRR13430588) Nov-08 19:08:36.016 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1049; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845521_SRR13430588); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/aa/5f0d941d75e4fa8c2db042e8e5a4f3] Nov-08 19:08:50.909 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21960081; id: 975; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845515_SRR13430594); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/86/e07daa6507afdac39a917830fb2abf started: 1731121490899; exited: 2024-11-09T03:08:46.715978354Z; ] Nov-08 19:08:51.005 [Task submitter] INFO nextflow.Session - [cf/a3717c] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845515_SRR13430594) Nov-08 19:08:51.038 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1050; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845515_SRR13430594); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/cf/a3717c1ec8a2685162aa42e1cf77f2] Nov-08 19:08:55.882 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959891; id: 928; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845537_SRR13430572); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/37/c56a62d0eee7945cc24162af6b446e started: 1731121495765; exited: 2024-11-09T03:08:53.373570189Z; ] Nov-08 19:08:55.901 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959932; id: 759; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845529_SRR13430580); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/8f/2e37209e60dc206a84c3313f05181a started: 1731121495788; exited: 2024-11-09T03:08:51.374356606Z; ] Nov-08 19:08:55.929 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21960014; id: 972; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845535_SRR13430574); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/f6/7b0cbe79c7160d6dae7468eb49d772 started: 1731121496061; exited: 2024-11-09T03:08:51.129404901Z; ] Nov-08 19:08:55.971 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21960111; id: 897; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845534_SRR13430575); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/9c/4af5c6bdc0c71b003ef3284ee53835 started: 1731121565816; exited: 2024-11-09T03:08:53.697016931Z; ] Nov-08 19:08:55.994 [Task submitter] INFO nextflow.Session - [8b/73f766] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845535_SRR13430574) Nov-08 19:08:56.011 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1051; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845535_SRR13430574); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/8b/73f766e421c56e999f2098f3a251ee] Nov-08 19:08:56.128 [Task submitter] INFO nextflow.Session - [04/5b58ca] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845529_SRR13430580) Nov-08 19:08:56.166 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1052; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845529_SRR13430580); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/04/5b58cae286ce0130295e1dc3182bb6] Nov-08 19:08:57.000 [Task submitter] INFO nextflow.Session - [c7/46460a] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845534_SRR13430575) Nov-08 19:08:57.036 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1053; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845534_SRR13430575); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/c7/46460a1487d0b930d9dc8b491f86a0] Nov-08 19:08:58.002 [Task submitter] INFO nextflow.Session - [d9/8f02ac] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845537_SRR13430572) Nov-08 19:08:58.052 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1054; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845537_SRR13430572); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d9/8f02acbff2233198f4e0513d7fb92e] Nov-08 19:09:05.874 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21960015; id: 746; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644324_SRR8856665); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/75/a04914f9d161a73c0a93c84b347f8a started: 1731121490872; exited: 2024-11-09T03:09:04.645655573Z; ] Nov-08 19:09:05.962 [Task submitter] INFO nextflow.Session - [27/098671] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX5644324_SRR8856665) Nov-08 19:09:05.972 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1055; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX5644324_SRR8856665); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/27/0986713fbe1c4fed55e36cba859ec6] Nov-08 19:09:10.888 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959664; id: 789; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040041_SRR22059149); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d4/e586cfb3515aa28d1ac175c503aa19 started: 1731120950567; exited: 2024-11-09T03:09:10.679381443Z; ] Nov-08 19:09:11.065 [Task submitter] INFO nextflow.Session - [80/e7e328] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040041_SRR22059149) Nov-08 19:09:11.099 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1056; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040041_SRR22059149); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/80/e7e328cafb4c05fca83855ad0cd0b2] Nov-08 19:09:21.555 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959902; id: 547; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059129); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/56/d223d79dcf1c5644681eb2aecc3667 started: 1731121060614; exited: 2024-11-09T03:09:19.551268989Z; ] Nov-08 19:09:21.580 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21960048; id: 963; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845530_SRR13430579); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/aa/dc37e8ca78f5799f2c2bca745a5743 started: 1731121496167; exited: 2024-11-09T03:09:18.070833554Z; ] Nov-08 19:09:21.660 [Task submitter] INFO nextflow.Session - [9f/bf48a6] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845530_SRR13430579) Nov-08 19:09:21.707 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1058; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845530_SRR13430579); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/9f/bf48a6687f565f81f07ae91e95db7b] Nov-08 19:09:22.258 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040062_SRR22059129) > jobId: 21960293; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/a6/9901865d3c2b5a2e8e782759ad9f8e Nov-08 19:09:22.259 [Task submitter] INFO nextflow.Session - [a6/990186] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040062_SRR22059129) Nov-08 19:09:25.907 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21960110; id: 990; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX7655159_SRR10993921); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d2/41e3678d9f2fa7863ab6cabb2a733e started: 1731121565808; exited: 2024-11-09T03:09:22.934346961Z; ] Nov-08 19:09:25.997 [Task submitter] INFO nextflow.Session - [21/eb6956] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7655159_SRR10993921) Nov-08 19:09:26.033 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1059; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX7655159_SRR10993921); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/21/eb69568909a81ef96d45c26881fd21] Nov-08 19:09:35.888 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21960077; id: 919; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644308_SRR8856681); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/bf/55f2c0fe4e60b7c4d0fd70ff748652 started: 1731121496238; exited: 2024-11-09T03:09:32.542739889Z; ] Nov-08 19:09:35.984 [Task submitter] INFO nextflow.Session - [b6/bb4367] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX5644308_SRR8856681) Nov-08 19:09:36.023 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1060; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX5644308_SRR8856681); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/b6/bb4367d85cc99d259f8bb15bf9f4d8] Nov-08 19:09:50.877 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959870; id: 940; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644339_SRR8856650); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/b8/dad1eafb68beff596018944b44dd07 started: 1731121495761; exited: 2024-11-09T03:09:49.065480419Z; ] Nov-08 19:09:50.885 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959916; id: 862; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845522_SRR13430587); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/13/30e8c8e5d7ffdfe3223d5e0d1a2976 started: 1731121490793; exited: 2024-11-09T03:09:48.355139047Z; ] Nov-08 19:09:50.940 [Task submitter] INFO nextflow.Session - [32/3e8ccd] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845522_SRR13430587) Nov-08 19:09:50.942 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1061; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845522_SRR13430587); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/32/3e8ccd37d5feb8886b21ce9b4808c1] Nov-08 19:09:51.946 [Task submitter] INFO nextflow.Session - [c0/aaf9f8] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX5644339_SRR8856650) Nov-08 19:09:51.986 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1062; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX5644339_SRR8856650); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/c0/aaf9f8344b09e8cb57c36df66ca795] Nov-08 19:09:55.897 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959883; id: 563; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR22059157); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/0b/a75177a114df406c4836338393f07b started: 1731121025587; exited: 2024-11-09T03:09:54.128333412Z; ] Nov-08 19:09:55.955 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21960106; id: 758; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644335_SRR8856654); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/9f/5bc1bea605efcf256399aaf2832fde started: 1731121535836; exited: 2024-11-09T03:09:53.093225321Z; ] Nov-08 19:09:56.027 [Task submitter] INFO nextflow.Session - [7e/59d0ef] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX5644335_SRR8856654) Nov-08 19:09:56.095 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1064; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX5644335_SRR8856654); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/7e/59d0efa7cb0702077c4f6f1386ef41] Nov-08 19:09:56.440 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040033_SRR22059157) > jobId: 21960300; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/cf/116ea763fd7148a79f9c3d93bb8b5c Nov-08 19:09:56.440 [Task submitter] INFO nextflow.Session - [cf/116ea7] Submitted process > NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040033_SRR22059157) Nov-08 19:10:00.901 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21960103; id: 918; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845524_SRR13430585); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/40/e73dc087efc8c88b620743d4a3ca73 started: 1731121530768; exited: 2024-11-09T03:09:59.953853544Z; ] Nov-08 19:10:00.984 [Task submitter] INFO nextflow.Session - [0e/8ae2ca] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845524_SRR13430585) Nov-08 19:10:01.069 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1065; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845524_SRR13430585); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/0e/8ae2ca6cac9f16c755b41363b47338] Nov-08 19:10:10.947 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21960020; id: 937; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644311_SRR8856678); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/93/636905cdf09b75d90b8dfbf2c2187b started: 1731121490878; exited: 2024-11-09T03:10:10.150452613Z; ] Nov-08 19:10:11.038 [Task submitter] INFO nextflow.Session - [9a/88b1b7] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX5644311_SRR8856678) Nov-08 19:10:11.050 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1066; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX5644311_SRR8856678); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/9a/88b1b7bf21028699057ad9ffd6859a] Nov-08 19:10:30.944 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959760; id: 777; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040054_SRR22059137); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/95/014cdac6e7f41307ed8f20f9be5f74 started: 1731121310669; exited: 2024-11-09T03:10:29.353235374Z; ] Nov-08 19:10:31.034 [Task submitter] INFO nextflow.Session - [74/63d1c2] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040054_SRR22059137) Nov-08 19:10:31.063 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1067; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040054_SRR22059137); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/74/63d1c2e636d2b74448f57c4cd4f6c5] Nov-08 19:10:35.954 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959023; id: 779; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040024_SRR22059168); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/33/4091184d771a2485dc33c543914ec5 started: 1731120510469; exited: 2024-11-09T03:10:33.112323981Z; ] Nov-08 19:10:35.971 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959957; id: 851; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644304_SRR8856685); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/7b/bb19009d0082e53a4e4f9aceda9e0e started: 1731121495804; exited: 2024-11-09T03:10:32.345921586Z; ] Nov-08 19:10:36.023 [Task submitter] INFO nextflow.Session - [c5/f2be67] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040024_SRR22059168) Nov-08 19:10:36.035 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1068; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040024_SRR22059168); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/c5/f2be677536c60d4c90a267ae4de1ef] Nov-08 19:10:36.040 [Task submitter] INFO nextflow.Session - [8f/f117ec] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX5644304_SRR8856685) Nov-08 19:10:36.070 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1069; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX5644304_SRR8856685); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/8f/f117ecdccc8f5cd0ba40c00a7e1698] Nov-08 19:10:40.959 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959955; id: 849; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644317_SRR8856672); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/07/f96de24cebf683f8125808f7bc9a59 started: 1731121490823; exited: 2024-11-09T03:10:40.846556205Z; ] Nov-08 19:10:41.093 [Task submitter] INFO nextflow.Session - [75/d4ad0f] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX5644317_SRR8856672) Nov-08 19:10:41.111 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1070; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX5644317_SRR8856672); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/75/d4ad0f66dd7e0e1f7d180734b12dc7] Nov-08 19:10:55.975 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959917; id: 863; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644329_SRR8856660); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/7e/de49111fc778c0adefef3451481ff1 started: 1731121495776; exited: 2024-11-09T03:10:52.107080112Z; ] Nov-08 19:10:56.053 [Task submitter] INFO nextflow.Session - [68/ea5dfa] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX5644329_SRR8856660) Nov-08 19:10:56.055 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1071; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX5644329_SRR8856660); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/68/ea5dfae7539dd2aaad3f87dbfe2a09] Nov-08 19:11:25.973 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21960241; id: 1029; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644333_SRR8856656); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/f0/f1ec31d7245eb94b5d23e479b6dd5b started: 1731121641264; exited: 2024-11-09T03:11:23.752653494Z; ] Nov-08 19:11:26.060 [Task submitter] INFO nextflow.Session - [d6/474a96] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX5644333_SRR8856656) Nov-08 19:11:26.093 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1072; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX5644333_SRR8856656); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d6/474a96f60fd7d9ab73fb1693edb848] Nov-08 19:11:35.984 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959947; id: 877; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX5644309_SRR8856680); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/27/a2856dfed57691cae3ca2846ab8988 started: 1731121495795; exited: 2024-11-09T03:11:32.009980499Z; ] Nov-08 19:11:36.067 [Task submitter] INFO nextflow.Session - [66/5c0911] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX5644309_SRR8856680) Nov-08 19:11:36.070 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1073; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX5644309_SRR8856680); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/66/5c0911cf19d60259b1734f7dd624d1] Nov-08 19:11:41.013 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21960243; id: 1030; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX9845527_SRR13430582); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/c4/3babf377e8db796b3cc5bb7547cee3 started: 1731121720875; exited: 2024-11-09T03:11:39.194440132Z; ] Nov-08 19:11:41.110 [Task submitter] INFO nextflow.Session - [8d/6394a0] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845527_SRR13430582) Nov-08 19:11:41.136 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1074; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX9845527_SRR13430582); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/8d/6394a094897c07a75ac75b91e06cae] Nov-08 19:12:01.010 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959759; id: 749; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040004_SRR22059187); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/6b/5956da4845ae2df3a81c1b67245756 started: 1731121305729; exited: 2024-11-09T03:11:58.385511698Z; ] Nov-08 19:12:01.120 [Task submitter] INFO nextflow.Session - [55/fac1e2] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040004_SRR22059187) Nov-08 19:12:01.169 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1075; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040004_SRR22059187); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/55/fac1e28b8b945a33cc2e148934aa70] Nov-08 19:12:06.022 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959588; id: 860; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040025_SRR22059165); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/89/2630063e52a0cfa31c8120a329013b started: 1731120910570; exited: 2024-11-09T03:12:03.789681913Z; ] Nov-08 19:12:06.094 [Task submitter] INFO nextflow.Session - [11/3abe64] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040025_SRR22059165) Nov-08 19:12:06.122 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1076; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040025_SRR22059165); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/11/3abe64d4f79fba4610d2d04c7f36c6] Nov-08 19:12:10.995 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959716; id: 836; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040034_SRR22059156); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/68/1724c38728575631712bc956a21e29 started: 1731121235692; exited: 2024-11-09T03:12:06.138739935Z; ] Nov-08 19:12:11.040 [Task submitter] INFO nextflow.Session - [a0/b9c8c0] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040034_SRR22059156) Nov-08 19:12:11.047 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1077; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040034_SRR22059156); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/a0/b9c8c0895d01a4c518b75e5ac7b93f] Nov-08 19:12:46.050 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959732; id: 882; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040047_SRR22059146); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/29/4ad22fe4d5d726444c379a96411663 started: 1731121270708; exited: 2024-11-09T03:12:45.486082737Z; ] Nov-08 19:12:46.141 [Task submitter] INFO nextflow.Session - [4f/4822f9] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040047_SRR22059146) Nov-08 19:12:46.152 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1078; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040047_SRR22059146); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/4f/4822f9e103067f277fcd0ca412dbe5] Nov-08 19:13:11.051 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959896; id: 946; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040060_SRR22059131); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/41/d56b5db70d31a68a5a0433577d9433 started: 1731121490778; exited: 2024-11-09T03:13:07.022191573Z; ] Nov-08 19:13:11.118 [Task submitter] INFO nextflow.Session - [ed/b5a77a] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040060_SRR22059131) Nov-08 19:13:11.162 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1079; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040060_SRR22059131); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ed/b5a77abbc6bdc64d701ec76196656b] Nov-08 19:13:21.515 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > No more task to compute -- The following nodes are still active: [process] NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET status=ACTIVE port 0: (queue) OPEN ; channel: meta port 1: (value) bound ; channel: pipeline port 2: (value) bound ; channel: strandedness port 3: (value) bound ; channel: mapping_fields port 4: (cntrl) - ; channel: $ [process] NFCORE_FETCHNGS:SRA:MULTIQC_MAPPINGS_CONFIG status=ACTIVE port 0: (queue) OPEN ; channel: csv port 1: (cntrl) - ; channel: $ Nov-08 19:13:26.064 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor slurm > tasks to be completed: 27 -- submitted tasks are shown below ~> TaskHandler[jobId: 21959599; id: 802; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040010_SRR22059182); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/a4/12d4a94572d50b2458b1f36bfc2684 started: 1731120910672; exited: 2024-11-09T03:13:21.934245989Z; ] ~> TaskHandler[jobId: 21959672; id: 800; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040009_SRR22059183); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/51/84a5aa9138e907667b47d9b51dde7c started: 1731121060574; exited: -; ] ~> TaskHandler[jobId: 21959713; id: 815; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040023_SRR22059169); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/0a/ed074bea4b07fd5fd38c2bd6ee9949 started: 1731121230705; exited: -; ] ~> TaskHandler[jobId: 21959717; id: 839; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040030_SRR22059159); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/30/3ed82ce80d3aa3d1ced2483f4715d9 started: 1731121270663; exited: -; ] ~> TaskHandler[jobId: 21959774; id: 890; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040026_SRR22059164); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/c2/f2807ed578829f5d091f1a49fe42a3 started: 1731121455755; exited: -; ] ~> TaskHandler[jobId: 21959823; id: 845; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040059_SRR22059132); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/bf/ab33a4773b0526bbcf343f1cef3f04 started: 1731121455776; exited: -; ] ~> TaskHandler[jobId: 21959824; id: 920; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040043_SRR22059147); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/3a/586770a36328639c2886bc10f293ac started: 1731121455783; exited: -; ] ~> TaskHandler[jobId: 21959862; id: 899; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040039_SRR22059154); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/3b/dc4a9ef3e6d29944bcd94734b1353e started: 1731121495756; exited: -; ] ~> TaskHandler[jobId: 21959895; id: 941; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040042_SRR22059148); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/6c/82182208a90b28430418c357a9884e started: 1731121490774; exited: -; ] ~> TaskHandler[jobId: 21959909; id: 796; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040051_SRR22059140); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d6/268fccdf2ba32f19a85cead68ee204 started: 1731121490782; exited: -; ] .. remaining tasks omitted. Nov-08 19:13:26.066 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959599; id: 802; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040010_SRR22059182); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/a4/12d4a94572d50b2458b1f36bfc2684 started: 1731120910672; exited: 2024-11-09T03:13:21.934245989Z; ] Nov-08 19:13:26.134 [Task submitter] INFO nextflow.Session - [13/e0bbde] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040010_SRR22059182) Nov-08 19:13:26.151 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1080; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040010_SRR22059182); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/13/e0bbde519b27bcdadf904149663013] Nov-08 19:13:31.080 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959862; id: 899; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040039_SRR22059154); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/3b/dc4a9ef3e6d29944bcd94734b1353e started: 1731121495756; exited: 2024-11-09T03:13:28.528781013Z; ] Nov-08 19:13:31.169 [Task submitter] INFO nextflow.Session - [48/1b27c2] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040039_SRR22059154) Nov-08 19:13:31.225 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1081; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040039_SRR22059154); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/48/1b27c2260f9b35da98f1eb05ad1418] Nov-08 19:13:41.074 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959824; id: 920; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040043_SRR22059147); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/3a/586770a36328639c2886bc10f293ac started: 1731121455783; exited: 2024-11-09T03:13:40.90555262Z; ] Nov-08 19:13:41.140 [Task submitter] INFO nextflow.Session - [3f/402b6f] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040043_SRR22059147) Nov-08 19:13:41.164 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1082; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040043_SRR22059147); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/3f/402b6f6cf6d9ba020ef5d94f7dbda0] Nov-08 19:13:56.089 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959959; id: 873; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040055_SRR22059135); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/3c/c774c5bc737a97b166d672e13ee13e started: 1731121495890; exited: 2024-11-09T03:13:55.967776294Z; ] Nov-08 19:13:56.173 [Task submitter] INFO nextflow.Session - [cc/8d02ca] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040055_SRR22059135) Nov-08 19:13:56.232 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1083; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040055_SRR22059135); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/cc/8d02ca7e817e901b93ebc91b125eea] Nov-08 19:14:06.092 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959970; id: 956; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040058_SRR22059136); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/35/ac293b38d4d48102fabe77ac7ecc6d started: 1731121490846; exited: 2024-11-09T03:14:05.610029268Z; ] Nov-08 19:14:06.160 [Task submitter] INFO nextflow.Session - [f4/7f8ec5] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040058_SRR22059136) Nov-08 19:14:06.196 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1084; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040058_SRR22059136); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/f4/7f8ec5dfc763a5232ab0d62e07aff2] Nov-08 19:14:41.113 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959895; id: 941; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040042_SRR22059148); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/6c/82182208a90b28430418c357a9884e started: 1731121490774; exited: 2024-11-09T03:14:39.171905973Z; ] Nov-08 19:14:41.187 [Task submitter] INFO nextflow.Session - [f4/4e63db] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040042_SRR22059148) Nov-08 19:14:41.196 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1085; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040042_SRR22059148); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/f4/4e63db9a76bb4eae837467ddf8a287] Nov-08 19:15:01.107 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959672; id: 800; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040009_SRR22059183); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/51/84a5aa9138e907667b47d9b51dde7c started: 1731121060574; exited: 2024-11-09T03:14:59.338484331Z; ] Nov-08 19:15:01.184 [Task submitter] INFO nextflow.Session - [85/7aec51] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040009_SRR22059183) Nov-08 19:15:01.186 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1086; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040009_SRR22059183); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/85/7aec517ccbf82a91541459421904ed] Nov-08 19:15:16.119 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21960024; id: 969; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040044_SRR22059145); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/4b/2ea2d3e69507591b705542b3295f5d started: 1731121496086; exited: 2024-11-09T03:15:15.077585543Z; ] Nov-08 19:15:16.212 [Task submitter] INFO nextflow.Session - [4d/2ca9ed] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040044_SRR22059145) Nov-08 19:15:16.215 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1087; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040044_SRR22059145); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/4d/2ca9ed643c4297dd049c482059b004] Nov-08 19:15:41.147 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21960114; id: 979; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040027_SRR22059163); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/e9/fe50b017bead025f0ac3b82bde272f started: 1731121600892; exited: 2024-11-09T03:15:40.998006337Z; ] Nov-08 19:15:41.293 [Task submitter] INFO nextflow.Session - [1a/c5c63a] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040027_SRR22059163) Nov-08 19:15:41.327 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1088; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040027_SRR22059163); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/1a/c5c63aefd60f54f6e9fddee81136e4] Nov-08 19:15:51.144 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959823; id: 845; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040059_SRR22059132); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/bf/ab33a4773b0526bbcf343f1cef3f04 started: 1731121455776; exited: 2024-11-09T03:15:46.418871097Z; ] Nov-08 19:15:51.232 [Task submitter] INFO nextflow.Session - [b1/202344] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040059_SRR22059132) Nov-08 19:15:51.235 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1089; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040059_SRR22059132); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/b1/2023444ea84d6aec8f70e57708761c] Nov-08 19:16:06.136 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959986; id: 786; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040011_SRR22059181); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/e6/e092d3c69e3c3df88bbe175d25d5ec started: 1731121495986; exited: 2024-11-09T03:16:03.44586653Z; ] Nov-08 19:16:06.444 [Task submitter] INFO nextflow.Session - [30/31b2da] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040011_SRR22059181) Nov-08 19:16:06.483 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1090; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040011_SRR22059181); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/30/31b2da4aab452a65bea40de820d6ef] Nov-08 19:16:16.146 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959992; id: 947; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040064_SRR22059127); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/b4/dc96e0083f89a5b77b17f5288b404d started: 1731121495997; exited: 2024-11-09T03:16:14.697772633Z; ] Nov-08 19:16:16.600 [Task submitter] INFO nextflow.Session - [ec/c96ac7] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040064_SRR22059127) Nov-08 19:16:16.640 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1091; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040064_SRR22059127); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ec/c96ac7bc622d73486ea3378db5397c] Nov-08 19:16:26.166 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959774; id: 890; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040026_SRR22059164); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/c2/f2807ed578829f5d091f1a49fe42a3 started: 1731121455755; exited: 2024-11-09T03:16:24.031103613Z; ] Nov-08 19:16:26.519 [Task submitter] INFO nextflow.Session - [45/be9e5c] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040026_SRR22059164) Nov-08 19:16:27.644 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1092; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040026_SRR22059164); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/45/be9e5c021089f7f96802eaa2938157] Nov-08 19:17:01.160 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959713; id: 815; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040023_SRR22059169); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/0a/ed074bea4b07fd5fd38c2bd6ee9949 started: 1731121230705; exited: 2024-11-09T03:16:59.537215916Z; ] Nov-08 19:17:02.405 [Task submitter] INFO nextflow.Session - [48/33f5dd] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040023_SRR22059169) Nov-08 19:17:03.696 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1093; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040023_SRR22059169); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/48/33f5dd699d4b89fd9d34fa3f28e5ff] Nov-08 19:17:11.190 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959717; id: 839; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040030_SRR22059159); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/30/3ed82ce80d3aa3d1ced2483f4715d9 started: 1731121270663; exited: 2024-11-09T03:17:07.645915965Z; ] Nov-08 19:17:12.059 [Task submitter] INFO nextflow.Session - [4e/dd2010] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040030_SRR22059159) Nov-08 19:17:12.491 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1094; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040030_SRR22059159); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/4e/dd201085beaa2063778847ce38fc14] Nov-08 19:17:22.370 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21960039; id: 795; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040014_SRR22059178); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/db/bba57076b436844ec770604b9b90cb started: 1731121496109; exited: 2024-11-09T03:17:21.510106214Z; ] Nov-08 19:17:22.703 [Task submitter] INFO nextflow.Session - [73/40ccd6] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040014_SRR22059178) Nov-08 19:17:22.726 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1095; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040014_SRR22059178); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/73/40ccd6366c378d7d5b8067767fd0b3] Nov-08 19:17:36.195 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959960; id: 878; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040031_SRR22059162); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/36/9c59b7c19133a645bfbd5cff446136 started: 1731121495910; exited: 2024-11-09T03:17:32.735599286Z; ] Nov-08 19:17:36.281 [Task submitter] INFO nextflow.Session - [ca/03f267] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040031_SRR22059162) Nov-08 19:17:36.322 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1096; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040031_SRR22059162); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ca/03f267a6c275a4b0ac0fa0dc58a45c] Nov-08 19:18:21.523 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > No more task to compute -- The following nodes are still active: [process] NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET status=ACTIVE port 0: (queue) OPEN ; channel: meta port 1: (value) bound ; channel: pipeline port 2: (value) bound ; channel: strandedness port 3: (value) bound ; channel: mapping_fields port 4: (cntrl) - ; channel: $ [process] NFCORE_FETCHNGS:SRA:MULTIQC_MAPPINGS_CONFIG status=ACTIVE port 0: (queue) OPEN ; channel: csv port 1: (cntrl) - ; channel: $ Nov-08 19:18:26.229 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor slurm > tasks to be completed: 10 -- submitted tasks are shown below ~> TaskHandler[jobId: 21959909; id: 796; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040051_SRR22059140); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d6/268fccdf2ba32f19a85cead68ee204 started: 1731121490782; exited: -; ] ~> TaskHandler[jobId: 21959924; id: 935; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040063_SRR22059128); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/df/fcead76840ac1f62ad4d534a81afed started: 1731121495782; exited: -; ] ~> TaskHandler[jobId: 21959968; id: 951; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040056_SRR22059134); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/09/33fbbfcb7c4404f5540054604e7505 started: 1731121495932; exited: -; ] ~> TaskHandler[jobId: 21960092; id: 977; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040061_SRR22059130); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/5f/bfe36165d305d46a500ce2f2c2dbd3 started: 1731121490911; exited: 2024-11-09T03:18:23.087068255Z; ] ~> TaskHandler[jobId: 21960112; id: 936; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040050_SRR22059166); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/5c/8c3312bf6b309506d8a51de2529482 started: 1731121610878; exited: -; ] ~> TaskHandler[jobId: 21960113; id: 961; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040029_SRR22059160); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/2f/b309592ec0f23a70d3d67b06dac856 started: 1731121605809; exited: -; ] ~> TaskHandler[jobId: 21960195; id: 1009; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040057_SRR22059133); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/e4/72a4ff3ba0ae86ff26b3cdac145deb started: 1731121600903; exited: -; ] ~> TaskHandler[jobId: 21960246; id: 1037; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040032_SRR22059158); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/52/aef75d58cee0416a7e37c0cf8a23cd started: 1731121720909; exited: -; ] ~> TaskHandler[jobId: 21960293; id: 1057; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040062_SRR22059129); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/a6/9901865d3c2b5a2e8e782759ad9f8e started: 1731121790910; exited: -; ] ~> TaskHandler[jobId: 21960300; id: 1063; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040033_SRR22059157); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/cf/116ea763fd7148a79f9c3d93bb8b5c started: 1731121821660; exited: -; ] Nov-08 19:18:26.235 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21960092; id: 977; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040061_SRR22059130); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/5f/bfe36165d305d46a500ce2f2c2dbd3 started: 1731121490911; exited: 2024-11-09T03:18:23.087068255Z; ] Nov-08 19:18:26.339 [Task submitter] INFO nextflow.Session - [01/ab3a18] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040061_SRR22059130) Nov-08 19:18:26.378 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1097; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040061_SRR22059130); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/01/ab3a18b2f1dc33fcc2873c1d891568] Nov-08 19:19:56.262 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959968; id: 951; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040056_SRR22059134); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/09/33fbbfcb7c4404f5540054604e7505 started: 1731121495932; exited: 2024-11-09T03:19:54.31072665Z; ] Nov-08 19:19:56.305 [Task submitter] INFO nextflow.Session - [27/116c73] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040056_SRR22059134) Nov-08 19:19:56.308 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1098; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040056_SRR22059134); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/27/116c730af035653516a7ed119fcec4] Nov-08 19:21:21.387 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21960246; id: 1037; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040032_SRR22059158); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/52/aef75d58cee0416a7e37c0cf8a23cd started: 1731121720909; exited: 2024-11-09T03:21:16.621115236Z; ] Nov-08 19:21:21.419 [Task submitter] INFO nextflow.Session - [37/f64b42] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040032_SRR22059158) Nov-08 19:21:21.422 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1099; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040032_SRR22059158); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/37/f64b42d3ad96f62983c1551177883f] Nov-08 19:22:16.301 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21960113; id: 961; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040029_SRR22059160); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/2f/b309592ec0f23a70d3d67b06dac856 started: 1731121605809; exited: 2024-11-09T03:22:12.465922605Z; ] Nov-08 19:22:16.308 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21960195; id: 1009; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040057_SRR22059133); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/e4/72a4ff3ba0ae86ff26b3cdac145deb started: 1731121600903; exited: 2024-11-09T03:22:15.350112226Z; ] Nov-08 19:22:16.372 [Task submitter] INFO nextflow.Session - [7d/073b93] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040029_SRR22059160) Nov-08 19:22:16.387 [Task submitter] DEBUG n.processor.TaskPollingMonitor - %% executor local > tasks in the submission queue: 1 -- tasks to be submitted are shown below ~> TaskHandler[id: 1100; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040057_SRR22059133); status: NEW; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/db/2368efd1e55984c205373b10dca619] Nov-08 19:22:16.388 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1101; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040029_SRR22059160); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/7d/073b93bd57a69c2bda4a5ce30f989a] Nov-08 19:22:17.377 [Task submitter] INFO nextflow.Session - [db/2368ef] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040057_SRR22059133) Nov-08 19:22:17.412 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1100; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040057_SRR22059133); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/db/2368efd1e55984c205373b10dca619] Nov-08 19:22:41.342 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21960112; id: 936; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040050_SRR22059166); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/5c/8c3312bf6b309506d8a51de2529482 started: 1731121610878; exited: 2024-11-09T03:22:40.839183734Z; ] Nov-08 19:22:41.444 [Task submitter] INFO nextflow.Session - [35/e81999] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040050_SRR22059166) Nov-08 19:22:41.461 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1102; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040050_SRR22059166); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/35/e819995fe46d3aaf999d31edc2b952] Nov-08 19:23:21.621 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > No more task to compute -- The following nodes are still active: [process] NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET status=ACTIVE port 0: (queue) OPEN ; channel: meta port 1: (value) bound ; channel: pipeline port 2: (value) bound ; channel: strandedness port 3: (value) bound ; channel: mapping_fields port 4: (cntrl) - ; channel: $ [process] NFCORE_FETCHNGS:SRA:MULTIQC_MAPPINGS_CONFIG status=ACTIVE port 0: (queue) OPEN ; channel: csv port 1: (cntrl) - ; channel: $ Nov-08 19:23:26.331 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor slurm > tasks to be completed: 4 -- submitted tasks are shown below ~> TaskHandler[jobId: 21959909; id: 796; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040051_SRR22059140); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d6/268fccdf2ba32f19a85cead68ee204 started: 1731121490782; exited: -; ] ~> TaskHandler[jobId: 21959924; id: 935; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040063_SRR22059128); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/df/fcead76840ac1f62ad4d534a81afed started: 1731121495782; exited: -; ] ~> TaskHandler[jobId: 21960293; id: 1057; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040062_SRR22059129); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/a6/9901865d3c2b5a2e8e782759ad9f8e started: 1731121790910; exited: -; ] ~> TaskHandler[jobId: 21960300; id: 1063; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040033_SRR22059157); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/cf/116ea763fd7148a79f9c3d93bb8b5c started: 1731121821660; exited: -; ] Nov-08 19:24:01.342 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959909; id: 796; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040051_SRR22059140); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/d6/268fccdf2ba32f19a85cead68ee204 started: 1731121490782; exited: 2024-11-09T03:23:57.493583497Z; ] Nov-08 19:24:01.394 [Task submitter] INFO nextflow.Session - [30/a3b2b3] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040051_SRR22059140) Nov-08 19:24:01.396 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1103; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040051_SRR22059140); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/30/a3b2b37775ed3c3b274070552b9faf] Nov-08 19:26:31.361 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21959924; id: 935; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040063_SRR22059128); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/df/fcead76840ac1f62ad4d534a81afed started: 1731121495782; exited: 2024-11-09T03:26:27.70966795Z; ] Nov-08 19:26:31.404 [Task submitter] INFO nextflow.Session - [ca/e9c2c9] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040063_SRR22059128) Nov-08 19:26:31.406 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1104; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040063_SRR22059128); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/ca/e9c2c9e3e74058609870cd1665503f] Nov-08 19:27:56.387 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21960293; id: 1057; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040062_SRR22059129); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/a6/9901865d3c2b5a2e8e782759ad9f8e started: 1731121790910; exited: 2024-11-09T03:27:52.077357387Z; ] Nov-08 19:27:56.424 [Task submitter] INFO nextflow.Session - [a6/87f892] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040062_SRR22059129) Nov-08 19:27:56.427 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1105; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040062_SRR22059129); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/a6/87f892d09b73febcd1398a0f968bd2] Nov-08 19:28:21.667 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > No more task to compute -- The following nodes are still active: [process] NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET status=ACTIVE port 0: (queue) OPEN ; channel: meta port 1: (value) bound ; channel: pipeline port 2: (value) bound ; channel: strandedness port 3: (value) bound ; channel: mapping_fields port 4: (cntrl) - ; channel: $ [process] NFCORE_FETCHNGS:SRA:MULTIQC_MAPPINGS_CONFIG status=ACTIVE port 0: (queue) OPEN ; channel: csv port 1: (cntrl) - ; channel: $ Nov-08 19:28:26.406 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor slurm > tasks to be completed: 1 -- submitted tasks are shown below ~> TaskHandler[jobId: 21960300; id: 1063; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040033_SRR22059157); status: RUNNING; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/cf/116ea763fd7148a79f9c3d93bb8b5c started: 1731121821660; exited: -; ] Nov-08 19:33:01.421 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21960300; id: 1063; name: NFCORE_FETCHNGS:SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX18040033_SRR22059157); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/cf/116ea763fd7148a79f9c3d93bb8b5c started: 1731121821660; exited: 2024-11-09T03:33:00.068096516Z; ] Nov-08 19:33:01.471 [Task submitter] INFO nextflow.Session - [1e/beadd8] Submitted process > NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040033_SRR22059157) Nov-08 19:33:01.474 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1106; name: NFCORE_FETCHNGS:SRA:SRA_TO_SAMPLESHEET (SRX18040033_SRR22059157); status: COMPLETED; exit: -; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/1e/beadd82bfe9cad95b9bfa42cc981cb] Nov-08 19:33:02.158 [Actor Thread 122] DEBUG nextflow.sort.BigSort - Sort completed -- entries: 221; slices: 1; internal sort time: 0.431 s; external sort time: 0.019 s; total time: 0.45 s Nov-08 19:33:02.177 [Actor Thread 115] DEBUG nextflow.sort.BigSort - Sort completed -- entries: 221; slices: 1; internal sort time: 0.429 s; external sort time: 0.04 s; total time: 0.469 s Nov-08 19:33:02.435 [Actor Thread 115] DEBUG nextflow.file.FileCollector - Saved collect-files list to: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/collect-file/bf1f3d7e94832d2c89a409711db70f16 Nov-08 19:33:02.482 [Actor Thread 122] DEBUG nextflow.file.FileCollector - Saved collect-files list to: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/collect-file/ef9161c07c0affaaa606b77a60319384 Nov-08 19:33:02.551 [Actor Thread 120] DEBUG nextflow.sort.BigSort - Sort completed -- entries: 1; slices: 1; internal sort time: 0.0 s; external sort time: 0.042 s; total time: 0.042 s Nov-08 19:33:02.568 [Actor Thread 120] DEBUG nextflow.file.FileCollector - Saved collect-files list to: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/collect-file/d8150cbe756adc443d4ec0398cd37e0a Nov-08 19:33:02.591 [Actor Thread 115] DEBUG nextflow.file.FileCollector - Deleting file collector temp dir: /tmp/nxf-9728145769650314278 Nov-08 19:33:02.591 [Actor Thread 122] DEBUG nextflow.file.FileCollector - Deleting file collector temp dir: /tmp/nxf-17611041475850943866 Nov-08 19:33:02.593 [Actor Thread 120] DEBUG nextflow.file.FileCollector - Deleting file collector temp dir: /tmp/nxf-16813408681833761858 Nov-08 19:33:02.622 [Actor Thread 121] DEBUG nextflow.sort.BigSort - Sort completed -- entries: 1; slices: 1; internal sort time: 0.0 s; external sort time: 0.001 s; total time: 0.001 s Nov-08 19:33:02.665 [Actor Thread 120] DEBUG nextflow.util.HashBuilder - Hash asset file sha-256: /mmfs1/home/strigg/.nextflow/assets/nf-core/fetchngs/bin/multiqc_mappings_config.py Nov-08 19:33:02.665 [Actor Thread 121] DEBUG nextflow.file.FileCollector - Saved collect-files list to: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/collect-file/22b5b2e8d32b045eb82b3b512ba24c43 Nov-08 19:33:02.680 [Actor Thread 121] DEBUG nextflow.file.FileCollector - Deleting file collector temp dir: /tmp/nxf-10565897073187534128 Nov-08 19:33:02.990 [Task submitter] DEBUG nextflow.executor.GridTaskHandler - [SLURM] submitted process NFCORE_FETCHNGS:SRA:MULTIQC_MAPPINGS_CONFIG (1) > jobId: 21960598; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/73/790500b76c63416a3b3d2d959a9e80 Nov-08 19:33:02.990 [Task submitter] INFO nextflow.Session - [73/790500] Submitted process > NFCORE_FETCHNGS:SRA:MULTIQC_MAPPINGS_CONFIG (1) Nov-08 19:33:21.460 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 21960598; id: 1107; name: NFCORE_FETCHNGS:SRA:MULTIQC_MAPPINGS_CONFIG (1); status: COMPLETED; exit: 0; error: -; workDir: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/73/790500b76c63416a3b3d2d959a9e80 started: 1731123201454; exited: 2024-11-09T03:33:18.463252773Z; ] Nov-08 19:33:21.498 [main] DEBUG nextflow.Session - Session await > all processes finished Nov-08 19:33:21.540 [Actor Thread 123] DEBUG nextflow.sort.BigSort - Sort completed -- entries: 5; slices: 1; internal sort time: 0.0 s; external sort time: 0.001 s; total time: 0.001 s Nov-08 19:33:21.579 [Actor Thread 123] DEBUG nextflow.file.FileCollector - Saved collect-files list to: /mmfs1/gscratch/scrubbed/strigg/analyses/20241108_RNAseq/work/collect-file/4de2b7bebafbd5f67d40b3a0214cd888 Nov-08 19:33:21.595 [Task monitor] DEBUG n.processor.TaskPollingMonitor - <<< barrier arrives (monitor: local) - terminating tasks monitor poll loop Nov-08 19:33:21.596 [Actor Thread 123] DEBUG nextflow.file.FileCollector - Deleting file collector temp dir: /tmp/nxf-9040128415879097025 Nov-08 19:33:26.446 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor slurm > No more task to compute -- Execution may be stalled Nov-08 19:33:26.446 [Task monitor] DEBUG n.processor.TaskPollingMonitor - <<< barrier arrives (monitor: slurm) - terminating tasks monitor poll loop Nov-08 19:33:26.447 [main] DEBUG nextflow.Session - Session await > all barriers passed Nov-08 19:33:26.498 [main] DEBUG nextflow.util.ThreadPoolManager - Thread pool 'TaskFinalizer' shutdown completed (hard=false) Nov-08 19:33:31.513 [main] INFO nextflow.util.ThreadPoolHelper - Waiting for file transfers to complete (2 files) Nov-08 19:33:41.383 [main] DEBUG nextflow.util.ThreadPoolManager - Thread pool 'PublishDir' shutdown completed (hard=false) Nov-08 19:33:41.387 [main] INFO nextflow.Nextflow - -[nf-core/fetchngs] Pipeline completed successfully- Nov-08 19:33:41.387 [main] WARN nextflow.Nextflow - ============================================================================= Please double-check the samplesheet that has been auto-created by the pipeline. Public databases don't reliably hold information such as strandedness information, controls etc All of the sample metadata obtained from the ENA has been appended as additional columns to help you manually curate the samplesheet before running nf-core/other pipelines. =================================================================================== Nov-08 19:33:41.403 [main] DEBUG n.trace.WorkflowStatsObserver - Workflow completed > WorkflowStats[succeededCount=1107; failedCount=0; ignoredCount=0; cachedCount=0; pendingCount=0; submittedCount=0; runningCount=0; retriesCount=0; abortedCount=0; succeedDuration=5d 20h 22m 34s; failedDuration=0ms; cachedDuration=0ms;loadCpus=0; loadMemory=0; peakRunning=100; peakCpus=442; peakMemory=2.6 TB; ] Nov-08 19:33:41.403 [main] DEBUG nextflow.trace.TraceFileObserver - Workflow completed -- saving trace file Nov-08 19:33:41.427 [main] DEBUG nextflow.trace.ReportObserver - Workflow completed -- rendering execution report Nov-08 19:33:43.421 [main] DEBUG nextflow.trace.TimelineObserver - Workflow completed -- rendering execution timeline Nov-08 19:33:43.911 [main] DEBUG nextflow.cache.CacheDB - Closing CacheDB done Nov-08 19:33:43.933 [main] INFO org.pf4j.AbstractPluginManager - Stop plugin 'nf-validation@1.1.3' Nov-08 19:33:43.933 [main] DEBUG nextflow.plugin.BasePlugin - Plugin stopped nf-validation Nov-08 19:33:43.934 [main] DEBUG nextflow.util.ThreadPoolManager - Thread pool 'FileTransfer' shutdown completed (hard=false) Nov-08 19:33:43.934 [main] DEBUG nextflow.script.ScriptRunner - > Execution complete -- Goodbye