FastQCFastQC Report
Wed 9 Oct 2024
SRX5644304_final_1.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRX5644304_final_1.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15295318
Total Bases1.3 Gbp
Sequences flagged as poor quality0
Sequence length15-91
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCTGCACTTAAAAGCATTTTTCGAACAACCAGCTATCTTAAAACTCGAA193750.12667275044559387No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)