CTRL_16C_26psu_2_S21_R1_001_val_1_bismark_bt2_pe.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.22.3 Bismark result file: paired-end (SAM format) Output specified: comprehensive No overlapping methylation calls specified Processed 9772535 lines in total Total number of methylation call strings processed: 19545070 Final Cytosine Methylation Report ================================= Total number of C's analysed: 177378889 Total methylated C's in CpG context: 15929233 Total methylated C's in CHG context: 405634 Total methylated C's in CHH context: 1622183 Total C to T conversions in CpG context: 4062908 Total C to T conversions in CHG context: 45374886 Total C to T conversions in CHH context: 109984045 C methylated in CpG context: 79.7% C methylated in CHG context: 0.9% C methylated in CHH context: 1.5%