16C_32psu_4_S4_R1_001_val_1_bismark_bt2_pe.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.22.3 Bismark result file: paired-end (SAM format) Output specified: comprehensive No overlapping methylation calls specified Processed 12468000 lines in total Total number of methylation call strings processed: 24936000 Final Cytosine Methylation Report ================================= Total number of C's analysed: 308524774 Total methylated C's in CpG context: 21456395 Total methylated C's in CHG context: 511960 Total methylated C's in CHH context: 2236056 Total C to T conversions in CpG context: 6179084 Total C to T conversions in CHG context: 72871173 Total C to T conversions in CHH context: 205270106 C methylated in CpG context: 77.6% C methylated in CHG context: 0.7% C methylated in CHH context: 1.1%