16C_32psu_2_S2_R1_001_val_1_bismark_bt2_pe.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.22.3 Bismark result file: paired-end (SAM format) Output specified: comprehensive No overlapping methylation calls specified Processed 15209436 lines in total Total number of methylation call strings processed: 30418872 Final Cytosine Methylation Report ================================= Total number of C's analysed: 299463924 Total methylated C's in CpG context: 22683754 Total methylated C's in CHG context: 532419 Total methylated C's in CHH context: 3075854 Total C to T conversions in CpG context: 6581107 Total C to T conversions in CHG context: 74405309 Total C to T conversions in CHH context: 192185481 C methylated in CpG context: 77.5% C methylated in CHG context: 0.7% C methylated in CHH context: 1.6%