16C_32psu_1_S1_R1_001_val_1_bismark_bt2_pe.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.22.3 Bismark result file: paired-end (SAM format) Output specified: comprehensive No overlapping methylation calls specified Processed 15311275 lines in total Total number of methylation call strings processed: 30622550 Final Cytosine Methylation Report ================================= Total number of C's analysed: 300021240 Total methylated C's in CpG context: 23535945 Total methylated C's in CHG context: 522768 Total methylated C's in CHH context: 2559042 Total C to T conversions in CpG context: 6515208 Total C to T conversions in CHG context: 73952510 Total C to T conversions in CHH context: 192935767 C methylated in CpG context: 78.3% C methylated in CHG context: 0.7% C methylated in CHH context: 1.3%