16C_26psu_4_S16_R1_001_val_1_bismark_bt2_pe.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.22.3 Bismark result file: paired-end (SAM format) Output specified: comprehensive No overlapping methylation calls specified Processed 13426810 lines in total Total number of methylation call strings processed: 26853620 Final Cytosine Methylation Report ================================= Total number of C's analysed: 280191041 Total methylated C's in CpG context: 21406831 Total methylated C's in CHG context: 489947 Total methylated C's in CHH context: 2829508 Total C to T conversions in CpG context: 5854128 Total C to T conversions in CHG context: 69158142 Total C to T conversions in CHH context: 180452485 C methylated in CpG context: 78.5% C methylated in CHG context: 0.7% C methylated in CHH context: 1.5%