ID	geneLength	allCountsMulti	filteredCountsMulti	dupRateMulti	dupsPerIdMulti	RPKMulti	RPKMMulti	allCounts	filteredCounts	dupRate	dupsPerId	RPK	RPKM
YAL069W	315	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL068W-A	255	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL068C	363	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL067W-A	228	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL067C	1782	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL066W	309	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL065C	387	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL064W-B	381	2	2	0	0	5.249343832021	2514.05355939703	1	1	0	0	2.6246719160105	1257.02677969851
YAL064C-A	381	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL064W	285	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL063C-A	291	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL063C	3969	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL062W	1374	1	1	0	0	0.727802037845706	348.564194370549	1	1	0	0	0.727802037845706	348.564194370549
YAL061W	1254	4	4	0	0	3.18979266347687	1527.67847867666	4	4	0	0	3.18979266347687	1527.67847867666
YAL060W	1149	21	21	0	0	18.2767624020888	8753.23869831838	21	21	0	0	18.2767624020888	8753.23869831838
YAL059C-A	423	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL059W	639	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL058W	1509	1	1	0	0	0.662690523525514	317.380518929844	1	1	0	0	0.662690523525514	317.380518929844
YAL056C-A	351	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL056W	2643	6	6	0	0	2.27014755959137	1087.23542126024	6	6	0	0	2.27014755959137	1087.23542126024
YAL055W	543	1	1	0	0	1.84162062615101	882.002215589566	1	1	0	0	1.84162062615101	882.002215589566
YAL054C	2142	1	1	0	0	0.466853408029879	223.588796949176	1	1	0	0	0.466853408029879	223.588796949176
YAL053W	2352	20	20	0	0	8.50340136054422	4072.5102301457	20	20	0	0	8.50340136054422	4072.5102301457
YAL051W	3144	5	5	0	0	1.59033078880407	761.652676630302	5	5	0	0	1.59033078880407	761.652676630302
YAL049C	741	8	8	0	0	10.7962213225371	5170.60408167486	6	6	0	0	8.09716599190283	3877.95306125615
YAL048C	1989	4	4	0	0	2.01106083459025	963.151740704141	4	4	0	0	2.01106083459025	963.151740704141
YAL047W-A	330	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL047C	1869	2	2	0	0	1.07009095773141	512.495669411594	2	2	0	0	1.07009095773141	512.495669411594
YAL046C	357	2	2	0	0	5.60224089635854	2683.06556339011	2	2	0	0	5.60224089635854	2683.06556339011
YAL045C	309	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL044W-A	333	1	1	0	0	3.003003003003	1438.21982902443	1	1	0	0	3.003003003003	1438.21982902443
YAL044C	513	11	11	0	0	21.4424951267057	10269.3942177709	11	11	0	0	21.4424951267057	10269.3942177709
YAL043C	2358	5	5	0	0	2.12044105173876	1015.53690217374	5	5	0	0	2.12044105173876	1015.53690217374
YAL042C-A	378	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL042W	1248	7	7	0	0	5.60897435897436	2686.29040180764	7	7	0	0	5.60897435897436	2686.29040180764
YAL041W	2565	4	4	0	0	1.55945419103314	746.865034019702	4	4	0	0	1.55945419103314	746.865034019702
YAL040C	1743	8	8	0	0	4.58978772231784	2198.17419651238	8	8	0	0	4.58978772231784	2198.17419651238
YAL039C	810	1	1	0	0	1.23456790123457	591.268151932264	1	1	0	0	1.23456790123457	591.268151932264
YAL038W	1503	385	164	0.574025974025974	221	256.154357950765	122679.290206305	385	164	0.574025974025974	221	256.154357950765	122679.290206305
YAL037C-B	975	3	2	0.333333333333333	1	3.07692307692308	1473.62216327734	3	2	0.333333333333333	1	3.07692307692308	1473.62216327734
YAL037C-A	93	1	1	0	0	10.752688172043	5149.75487166811	1	1	0	0	10.752688172043	5149.75487166811
YAL037W	804	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL036C	1110	3	3	0	0	2.7027027027027	1294.39784612198	3	3	0	0	2.7027027027027	1294.39784612198
YAL035W	3009	28	28	0	0	9.30541708208707	4456.61737647848	28	28	0	0	9.30541708208707	4456.61737647848
YAL034C-B	354	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL034W-A	870	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL034C	1242	3	3	0	0	2.41545893719807	1156.82899291095	3	3	0	0	2.41545893719807	1156.82899291095
YAL033W	522	2	2	0	0	3.83141762452107	1834.97012668634	2	2	0	0	3.83141762452107	1834.97012668634
YAL032C	1140	1	1	0	0	0.87719298245614	420.111581636083	1	1	0	0	0.87719298245614	420.111581636083
YAL031W-A	309	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL031C	2283	2	2	0	0	0.876040297853701	419.55952962342	2	2	0	0	0.876040297853701	419.55952962342
YAL030W	354	3	3	0	0	8.47457627118644	4058.70511072148	3	3	0	0	8.47457627118644	4058.70511072148
YAL029C	4416	9	9	0	0	2.03804347826087	976.074462768616	9	9	0	0	2.03804347826087	976.074462768616
YAL028W	1587	1	1	0	0	0.630119722747322	301.781476411553	1	1	0	0	0.630119722747322	301.781476411553
YAL027W	786	2	2	0	0	2.54452926208651	1218.64428260848	2	2	0	0	2.54452926208651	1218.64428260848
YAL026C-A	438	1	1	0	0	2.28310502283105	1093.44110288843	1	1	0	0	2.28310502283105	1093.44110288843
YAL026C	4068	18	18	0	0	4.42477876106195	2119.14691621741	18	18	0	0	4.42477876106195	2119.14691621741
HRA1	564	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL025C	921	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL024C	4308	3	3	0	0	0.696378830083565	333.514765365692	3	3	0	0	0.696378830083565	333.514765365692
YAL023C	2280	36	36	0	0	15.7894736842105	7562.00846944949	36	36	0	0	15.7894736842105	7562.00846944949
YAL022C	1554	8	8	0	0	5.14800514800515	2465.51970689902	8	8	0	0	5.14800514800515	2465.51970689902
YAL021C	2514	11	11	0	0	4.37549721559268	2095.54464348308	11	11	0	0	4.37549721559268	2095.54464348308
YAL020C	1002	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL019W-A	570	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL019W	3396	5	5	0	0	1.47232037691402	705.134280131234	5	5	0	0	1.47232037691402	705.134280131234
YAL018C	978	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL017W	4071	22	22	0	0	5.40407762220585	2588.15978074993	22	22	0	0	5.40407762220585	2588.15978074993
YAL016C-B	186	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL016C-A	315	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL016W	1908	25	25	0	0	13.1027253668763	6275.25161248865	25	25	0	0	13.1027253668763	6275.25161248865
YAL015C	1200	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL014C	768	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL013W	1218	1	1	0	0	0.821018062397373	393.207884289929	1	1	0	0	0.821018062397373	393.207884289929
YAL012W	1185	14	14	0	0	11.8143459915612	5658.21168178218	14	14	0	0	11.8143459915612	5658.21168178218
YAL011W	1878	2	2	0	0	1.06496272630458	510.039619877672	2	2	0	0	1.06496272630458	510.039619877672
YAL010C	1482	1	1	0	0	0.67476383265857	323.162755104679	1	1	0	0	0.67476383265857	323.162755104679
YAL009W	780	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL008W	597	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL007C	648	8	7	0.125	1	12.3456790123457	5912.68151932264	8	7	0.125	1	12.3456790123457	5912.68151932264
tP(UGG)A	72	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL005C	1929	220	150	0.318181818181818	70	114.048729911871	54621.0392298235	220	150	0.318181818181818	70	114.048729911871	54621.0392298235
YAL004W	648	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL003W	621	93	75	0.193548387096774	18	149.75845410628	71723.397560479	93	75	0.193548387096774	18	149.75845410628	71723.397560479
snR18	102	2	2	0	0	19.6078431372549	9390.72947186538	2	2	0	0	19.6078431372549	9390.72947186538
YAL002W	3825	4	4	0	0	1.04575163398693	500.838905166153	4	4	0	0	1.04575163398693	500.838905166153
YAL001C	3483	5	5	0	0	1.43554407120299	687.521106897982	5	5	0	0	1.43554407120299	687.521106897982
YAR002W	1620	5	5	0	0	3.08641975308642	1478.17037983066	5	5	0	0	3.08641975308642	1478.17037983066
YAR002C-A	660	13	13	0	0	19.6969696969697	9433.4146058284	13	13	0	0	19.6969696969697	9433.4146058284
YAR003W	1281	3	3	0	0	2.34192037470726	1121.6093748598	3	3	0	0	2.34192037470726	1121.6093748598
YAR007C	1866	7	7	0	0	3.7513397642015	1796.61866101604	7	7	0	0	3.7513397642015	1796.61866101604
YAR008W	828	1	1	0	0	1.20772946859903	578.414496455476	1	1	0	0	1.20772946859903	578.414496455476
YAR009C	3591	56	53	0.0535714285714286	3	15.5945419103314	7468.65034019702	56	53	0.0535714285714286	3	15.5945419103314	7468.65034019702
YAR010C	1323	17	15	0.117647058823529	2	12.8495842781557	6154.01545888683	17	15	0.117647058823529	2	12.8495842781557	6154.01545888683
tA(UGC)A	73	0	0	NA	0	0	0	0	0	NA	0	0	0
YAR014C	2130	2	2	0	0	0.938967136150235	449.696904286511	2	2	0	0	0.938967136150235	449.696904286511
YAR015W	921	32	30	0.0625	2	34.7448425624321	16640.2502693641	32	30	0.0625	2	34.7448425624321	16640.2502693641
YAR018C	1308	4	4	0	0	3.05810397553517	1464.60918368543	4	4	0	0	3.05810397553517	1464.60918368543
YAR019C	2925	2	2	0	0	0.683760683760684	327.471591839408	2	2	0	0	0.683760683760684	327.471591839408
YAR019W-A	333	0	0	NA	0	0	0	0	0	NA	0	0	0
YAR020C	168	0	0	NA	0	0	0	0	0	NA	0	0	0
YAR023C	540	0	0	NA	0	0	0	0	0	NA	0	0	0
tL(CAA)A	82	0	0	NA	0	0	0	0	0	NA	0	0	0
tS(AGA)A	82	0	0	NA	0	0	0	0	0	NA	0	0	0
YAR027W	708	6	6	0	0	8.47457627118644	4058.70511072148	6	6	0	0	8.47457627118644	4058.70511072148
YAR028W	705	0	0	NA	0	0	0	0	0	NA	0	0	0
YAR029W	225	0	0	NA	0	0	0	0	0	NA	0	0	0
YAR030C	342	1	1	0	0	2.92397660818713	1400.37193878694	1	1	0	0	2.92397660818713	1400.37193878694
YAR031W	897	1	1	0	0	1.11482720178372	533.921073651209	1	1	0	0	1.11482720178372	533.921073651209
YAR033W	705	1	1	0	0	1.41843971631206	679.329366049836	1	1	0	0	1.41843971631206	679.329366049836
YAR035W	2064	0	0	NA	0	0	0	0	0	NA	0	0	0
YAR035C-A	81	0	0	NA	0	0	0	0	0	NA	0	0	0
YAR042W	3567	8	8	0	0	2.24278104850014	1074.12885464566	8	8	0	0	2.24278104850014	1074.12885464566
YAR047C	321	0	0	NA	0	0	0	0	0	NA	0	0	0
YAR050W	4614	1	1	0	0	0.216731686172518	103.798700274195	0	0	NA	0	0	0
YAR053W	297	0	0	NA	0	0	0	0	0	NA	0	0	0
YAR060C	336	0	0	NA	0	0	0	0	0	NA	0	0	0
YAR061W	204	0	0	NA	0	0	0	0	0	NA	0	0	0
YAR062W	597	0	0	NA	0	0	0	0	0	NA	0	0	0
YAR064W	300	0	0	NA	0	0	0	0	0	NA	0	0	0
YAR066W	612	0	0	NA	0	0	0	0	0	NA	0	0	0
YAR068W	486	0	0	NA	0	0	0	0	0	NA	0	0	0
YAR069C	294	0	0	NA	0	0	0	0	0	NA	0	0	0
YAR070C	300	0	0	NA	0	0	0	0	0	NA	0	0	0