ID	geneLength	allCountsMulti	filteredCountsMulti	dupRateMulti	dupsPerIdMulti	RPKMulti	RPKMMulti	allCounts	filteredCounts	dupRate	dupsPerId	RPK	RPKM
YAL069W	315	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL068W-A	255	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL068C	363	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL067W-A	228	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL067C	1782	1	1	0	0	0.561167227833894	254.151824200133	1	1	0	0	0.561167227833894	254.151824200133
YAL066W	309	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL065C	387	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL064W-B	381	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL064C-A	381	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL064W	285	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL063C-A	291	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL063C	3969	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL062W	1374	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL061W	1254	6	6	0	0	4.78468899521531	2166.97871160114	6	6	0	0	4.78468899521531	2166.97871160114
YAL060W	1149	16	16	0	0	13.9251523063534	6306.68129816728	16	16	0	0	13.9251523063534	6306.68129816728
YAL059C-A	423	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL059W	639	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL058W	1509	7	7	0	0	4.63883366467859	2100.9210437856	7	7	0	0	4.63883366467859	2100.9210437856
YAL056C-A	351	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL056W	2643	9	9	0	0	3.40522133938706	1542.21980950501	9	9	0	0	3.40522133938706	1542.21980950501
YAL055W	543	1	1	0	0	1.84162062615101	834.067312568394	1	1	0	0	1.84162062615101	834.067312568394
YAL054C	2142	2	2	0	0	0.933706816059757	422.87446379518	2	2	0	0	0.933706816059757	422.87446379518
YAL053W	2352	17	17	0	0	7.22789115646258	3273.50142955733	17	17	0	0	7.22789115646258	3273.50142955733
YAL051W	3144	2	2	0	0	0.636132315521629	288.103403768854	2	2	0	0	0.636132315521629	288.103403768854
YAL049C	741	7	7	0	0	9.44669365721997	4278.39386649455	7	7	0	0	9.44669365721997	4278.39386649455
YAL048C	1989	3	3	0	0	1.50829562594268	683.104903053752	3	3	0	0	1.50829562594268	683.104903053752
YAL047W-A	330	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL047C	1869	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL046C	357	2	2	0	0	5.60224089635854	2537.24678277108	2	2	0	0	5.60224089635854	2537.24678277108
YAL045C	309	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL044W-A	333	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL044C	513	9	9	0	0	17.5438596491228	7945.58860920417	9	9	0	0	17.5438596491228	7945.58860920417
YAL043C	2358	9	9	0	0	3.81679389312977	1728.62042261312	9	9	0	0	3.81679389312977	1728.62042261312
YAL042C-A	378	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL042W	1248	9	9	0	0	7.21153846153846	3266.09531772575	9	9	0	0	7.21153846153846	3266.09531772575
YAL041W	2565	5	5	0	0	1.94931773879142	882.843178800463	5	5	0	0	1.94931773879142	882.843178800463
YAL040C	1743	16	16	0	0	9.17957544463569	4157.41641514297	16	16	0	0	9.17957544463569	4157.41641514297
YAL039C	810	1	1	0	0	1.23456790123457	559.134013240293	1	1	0	0	1.23456790123457	559.134013240293
YAL038W	1503	397	177	0.554156171284635	220	264.138389886893	119627.893970513	397	177	0.554156171284635	220	264.138389886893	119627.893970513
YAL037C-B	975	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL037C-A	93	1	1	0	0	10.752688172043	4869.87688951223	1	1	0	0	10.752688172043	4869.87688951223
YAL037W	804	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL036C	1110	5	5	0	0	4.5045045045045	2040.08356182269	5	5	0	0	4.5045045045045	2040.08356182269
YAL035W	3009	32	32	0	0	10.6347623795281	4816.46846898917	32	32	0	0	10.6347623795281	4816.46846898917
YAL034C-B	354	2	2	0	0	5.64971751412429	2558.7488741505	2	2	0	0	5.64971751412429	2558.7488741505
YAL034W-A	870	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL034C	1242	1	1	0	0	0.805152979066023	364.652617330626	1	1	0	0	0.805152979066023	364.652617330626
YAL033W	522	2	2	0	0	3.83141762452107	1735.24348936643	2	2	0	0	3.83141762452107	1735.24348936643
YAL032C	1140	3	3	0	0	2.63157894736842	1191.83829138063	3	3	0	0	2.63157894736842	1191.83829138063
YAL031W-A	309	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL031C	2283	4	4	0	0	1.7520805957074	793.514762548642	4	4	0	0	1.7520805957074	793.514762548642
YAL030W	354	3	3	0	0	8.47457627118644	3838.12331122574	3	3	0	0	8.47457627118644	3838.12331122574
YAL029C	4416	14	14	0	0	3.17028985507246	1435.81968073934	14	14	0	0	3.17028985507246	1435.81968073934
YAL028W	1587	1	1	0	0	0.630119722747322	285.380309215273	1	1	0	0	0.630119722747322	285.380309215273
YAL027W	786	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL026C-A	438	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL026C	4068	20	18	0.1	2	4.91642084562439	2226.63987573568	19	17	0.105263157894737	2	4.67059980334317	2115.3078819489
HRA1	564	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL025C	921	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL024C	4308	2	2	0	0	0.464252553389044	210.25930860011	2	2	0	0	0.464252553389044	210.25930860011
YAL023C	2280	36	34	0.0555555555555556	2	15.7894736842105	7151.02974828375	36	34	0.0555555555555556	2	15.7894736842105	7151.02974828375
YAL022C	1554	10	10	0	0	6.43500643500643	2914.40508831813	10	10	0	0	6.43500643500643	2914.40508831813
YAL021C	2514	12	12	0	0	4.77326968973747	2161.80692469994	12	12	0	0	4.77326968973747	2161.80692469994
YAL020C	1002	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL019W-A	570	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL019W	3396	3	3	0	0	0.88339222614841	400.087058944026	3	3	0	0	0.88339222614841	400.087058944026
YAL018C	978	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL017W	4071	23	23	0	0	5.64971751412429	2558.7488741505	23	23	0	0	5.64971751412429	2558.7488741505
YAL016C-B	186	1	1	0	0	5.37634408602151	2434.93844475612	1	1	0	0	5.37634408602151	2434.93844475612
YAL016C-A	315	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL016W	1908	20	18	0.1	2	10.482180293501	4747.36426336098	19	17	0.105263157894737	2	9.958071278826	4509.99605019293
YAL015C	1200	1	1	0	0	0.833333333333333	377.415458937198	1	1	0	0	0.833333333333333	377.415458937198
YAL014C	768	3	3	0	0	3.90625	1769.13496376812	3	3	0	0	3.90625	1769.13496376812
YAL013W	1218	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL012W	1185	20	19	0.05	1	16.8776371308017	7643.85739619642	20	19	0.05	1	16.8776371308017	7643.85739619642
YAL011W	1878	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL010C	1482	1	1	0	0	0.67476383265857	305.599561892468	1	1	0	0	0.67476383265857	305.599561892468
YAL009W	780	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL008W	597	2	2	0	0	3.3500837520938	1517.24807612944	2	2	0	0	3.3500837520938	1517.24807612944
YAL007C	648	12	12	0	0	18.5185185185185	8387.0101986044	12	12	0	0	18.5185185185185	8387.0101986044
tP(UGG)A	72	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL005C	1929	202	144	0.287128712871287	58	104.717470191809	47426.3904854208	202	144	0.287128712871287	58	104.717470191809	47426.3904854208
YAL004W	648	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL003W	621	91	67	0.263736263736264	24	146.537842190016	66366.776354174	91	67	0.263736263736264	24	146.537842190016	66366.776354174
snR18	102	2	2	0	0	19.6078431372549	8880.36373969878	2	2	0	0	19.6078431372549	8880.36373969878
YAL002W	3825	6	6	0	0	1.56862745098039	710.429099175902	6	6	0	0	1.56862745098039	710.429099175902
YAL001C	3483	1	1	0	0	0.287108814240597	130.031165869836	1	1	0	0	0.287108814240597	130.031165869836
YAR002W	1620	1	1	0	0	0.617283950617284	279.567006620147	1	1	0	0	0.617283950617284	279.567006620147
YAR002C-A	660	23	20	0.130434782608696	3	34.8484848484849	15782.8282828283	23	20	0.130434782608696	3	34.8484848484849	15782.8282828283
YAR003W	1281	4	4	0	0	3.12256049960968	1414.20312482322	4	4	0	0	3.12256049960968	1414.20312482322
YAR007C	1866	9	9	0	0	4.82315112540193	2184.39815462044	9	9	0	0	4.82315112540193	2184.39815462044
YAR008W	828	0	0	NA	0	0	0	0	0	NA	0	0	0
YAR009C	3591	43	41	0.0465116279069767	2	11.974380395433	5423.17952691713	43	41	0.0465116279069767	2	11.974380395433	5423.17952691713
YAR010C	1323	7	7	0	0	5.29100529100529	2396.28862817269	7	7	0	0	5.29100529100529	2396.28862817269
tA(UGC)A	73	0	0	NA	0	0	0	0	0	NA	0	0	0
YAR014C	2130	8	8	0	0	3.75586854460094	1701.02742056202	8	8	0	0	3.75586854460094	1701.02742056202
YAR015W	921	29	28	0.0344827586206897	1	31.4875135722041	14260.6492627736	29	28	0.0344827586206897	1	31.4875135722041	14260.6492627736
YAR018C	1308	1	1	0	0	0.764525993883792	346.252714621283	1	1	0	0	0.764525993883792	346.252714621283
YAR019C	2925	2	1	0.5	1	0.683760683760684	309.674222717701	2	1	0.5	1	0.683760683760684	309.674222717701
YAR019W-A	333	0	0	NA	0	0	0	0	0	NA	0	0	0
YAR020C	168	0	0	NA	0	0	0	0	0	NA	0	0	0
YAR023C	540	1	1	0	0	1.85185185185185	838.70101986044	1	1	0	0	1.85185185185185	838.70101986044
tL(CAA)A	82	0	0	NA	0	0	0	0	0	NA	0	0	0
tS(AGA)A	82	0	0	NA	0	0	0	0	0	NA	0	0	0
YAR027W	708	7	7	0	0	9.88700564971752	4477.81052976337	7	7	0	0	9.88700564971752	4477.81052976337
YAR028W	705	0	0	NA	0	0	0	0	0	NA	0	0	0
YAR029W	225	0	0	NA	0	0	0	0	0	NA	0	0	0
YAR030C	342	1	1	0	0	2.92397660818713	1324.2647682007	1	1	0	0	2.92397660818713	1324.2647682007
YAR031W	897	0	0	NA	0	0	0	0	0	NA	0	0	0
YAR033W	705	0	0	NA	0	0	0	0	0	NA	0	0	0
YAR035W	2064	0	0	NA	0	0	0	0	0	NA	0	0	0
YAR035C-A	81	0	0	NA	0	0	0	0	0	NA	0	0	0
YAR042W	3567	3	3	0	0	0.841042893187553	380.907107421899	3	3	0	0	0.841042893187553	380.907107421899
YAR047C	321	0	0	NA	0	0	0	0	0	NA	0	0	0
YAR050W	4614	2	2	0	0	0.433463372345037	196.314933127281	2	2	0	0	0.433463372345037	196.314933127281
YAR053W	297	0	0	NA	0	0	0	0	0	NA	0	0	0
YAR060C	336	0	0	NA	0	0	0	0	0	NA	0	0	0
YAR061W	204	0	0	NA	0	0	0	0	0	NA	0	0	0
YAR062W	597	0	0	NA	0	0	0	0	0	NA	0	0	0
YAR064W	300	0	0	NA	0	0	0	0	0	NA	0	0	0
YAR066W	612	0	0	NA	0	0	0	0	0	NA	0	0	0
YAR068W	486	0	0	NA	0	0	0	0	0	NA	0	0	0
YAR069C	294	0	0	NA	0	0	0	0	0	NA	0	0	0
YAR070C	300	0	0	NA	0	0	0	0	0	NA	0	0	0